Factsheet for TraesCS6A01G363200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G346400.1	Wheat	plasma membrane	93.14	93.14
TraesCS6B01G396800.1	Wheat	plasma membrane	91.79	91.79
TraesCS6B01G398200.1	Wheat	plasma membrane	91.34	91.44
TraesCS6A01G363300.1	Wheat	plasma membrane	70.08	73.38
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	48.14	72.54
TraesCS6A01G363400.1	Wheat	peroxisome	70.3	70.07
TraesCS6A01G363100.2	Wheat	plasma membrane	70.19	66.52
TraesCS5A01G042100.1	Wheat	plasma membrane	65.47	64.31
TraesCS7A01G217400.1	Wheat	plasma membrane	41.17	61.2
TraesCS7A01G217500.1	Wheat	plasma membrane	18.56	60.89
TraesCS7A01G217300.1	Wheat	peroxisome	55.79	57.88
Zm00001d012387_P001	Maize	plasma membrane	33.3	56.06
Zm00001d028649_P001	Maize	plasma membrane	53.77	52.88
Os06t0296700-01	Rice	plasma membrane	50.39	52.64
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	32.06	46.64
TraesCS3A01G471000.1	Wheat	plasma membrane	45.78	46.51
Os06t0296100-00	Rice	plasma membrane	44.66	45.27
TraesCS7A01G040300.1	Wheat	plasma membrane	44.09	41.26
TraesCS2A01G041700.1	Wheat	plasma membrane	40.83	41.11
TraesCS7A01G038500.1	Wheat	plasma membrane	44.21	38.57
TraesCS2A01G041800.1	Wheat	plasma membrane	40.49	38.5
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	42.52	38.41
TraesCS5A01G132400.1	Wheat	plasma membrane	38.7	37.97
TraesCS4A01G449900.1	Wheat	plasma membrane	43.53	37.94
TraesCS4A01G449800.1	Wheat	peroxisome	42.29	37.87
TraesCS5A01G551500.1	Wheat	plasma membrane	39.82	37.54
TraesCS7A01G129400.1	Wheat	plasma membrane	39.03	37.51
TraesCS6A01G354600.1	Wheat	plasma membrane	39.48	37.42
TraesCS4A01G448200.1	Wheat	plasma membrane	38.36	37.19
TraesCS4A01G395800.1	Wheat	plasma membrane	20.7	36.87
TraesCS4A01G450200.1	Wheat	plasma membrane	42.41	36.82
TraesCS7A01G038400.1	Wheat	plasma membrane	42.29	36.75
TraesCS4A01G450000.1	Wheat	plasma membrane	31.38	36.66
TraesCS5A01G358400.1	Wheat	plasma membrane	35.21	36.35
TraesCS7A01G095400.1	Wheat	plasma membrane	39.26	35.43
TraesCS5A01G551400.1	Wheat	plasma membrane	39.26	35.08
TraesCS5A01G551600.1	Wheat	plasma membrane	39.6	34.27
TraesCS7A01G216500.1	Wheat	plasma membrane	20.25	33.64
TraesCS7A01G217600.1	Wheat	plasma membrane	36.22	33.2
TraesCS7A01G217700.1	Wheat	plasma membrane	35.21	32.95
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	36.33	32.43
TraesCS6A01G354800.1	Wheat	plasma membrane	42.29	30.54
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	8.1	30.25
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	5.85	29.71
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	7.76	28.51
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	9.11	28.32
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	7.2	27.23
TraesCS7A01G216700.1	Wheat	plasma membrane	34.31	26.52
TraesCS7A01G217100.1	Wheat	plasma membrane	34.65	26.44
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	6.86	24.7
TraesCS7A01G216300.1	Wheat	plasma membrane	34.98	24.28
TraesCS6A01G395500.1	Wheat	cytosol	4.05	24.0
TraesCS7A01G216900.1	Wheat	plasma membrane	21.37	22.12
TraesCS7A01G216600.1	Wheat	cytosol, plastid	13.39	17.58
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.52	16.25

Protein Annotations

EnsemblPlants:TraesCS6A01G363200.1	EnsemblPlantsGene:TraesCS6A01G363200	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6A:-:592492419..592495209

Molecular Weight (calculated)

97754.6 Da

IEP (calculated)

9.066

GRAVY (calculated)

0.238

Length

889 amino acids

Sequence
(BLAST)

001: MECGGVSAVQ VQPAAPTDQP GQPAKPPVQP WEYSLRKYLL LLAALVVTVT YAAGFSPPGG VWQTAQDGQP AGDPIIRGTH YRRYLAFFYC NATAFAASLV
101: VIVLILVLAA RHDKKGKDSR WVVVPLRLVM VLDLLSLMGA YGAGTCQDKI SIVYSAVLVA AIFLYVAVLK MMDWYCPDKS SDPGSGGTMT ATNSNSSSGG
201: MMSTPDPDSD AVTIRSPIRD SDPNVKEKED REREVLKKLK ADERLRKVLM LLATFAVSIT YIAGLSTPGG FWDSTGASYR PGDAILKDHH RPRLTVFLLC
301: NTTAFVASLV IIMLLIIDGK KLREKTVRSL VLYGFIVVAL VSLVGAYTAG SCRETKTTIY VVSLAGGILA MAYILLYAFY TLKSSRSSPT QQTDALQQTN
401: DNISRRKGLD KARSLVLLLA TLAATITYTA GLDPPGGVWQ DNDHGHMAGD PILITTNIGR YRAFYYCNSV AFVASLLVIV LVQTERLIKH HVLEAAMILD
501: LFGLIGAYAA GSCRDVNSSI YVMALAGAAL IYVVIHIVFF TLELDHKDKK DDDQEDELLE KRRKRLLLFA ILAATITYQA GLTPPGGFLL QDDTLGHHAG
601: DPILLHNYPV RYHAFFYCNS VSFMLSIALI ILLVNPNLYR PAIQSNALSV CTAVGLFCLM GAYAAGSTQH RKTSIYIFVL VAVVLLIAAG LLLVFLLKRK
701: LSNVVVAPPR EQNEEERKKE VEEKNEDEEE AKKHARRKYL MLLGILVASV AYQAGLEPPG GAWQNNDNGY DAGNPVMNDN RRPRYLTFFY SNSISFVASI
801: VVIIMLLPQW LPKKKEGEWE KWSLRVMNWM IRLDLFALLV AYAAGSNRGL KTSLFVVALI FAVLGYFAIH TVLACTVCRR ERRQSSSVV

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.