Factsheet for TraesCS5A01G042100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	45.3	69.49
TraesCS6A01G363300.1	Wheat	plasma membrane	63.87	68.08
TraesCS6A01G363200.1	Wheat	plasma membrane	64.31	65.47
TraesCS6A01G363400.1	Wheat	peroxisome	63.54	64.46
TraesCS6A01G363100.2	Wheat	plasma membrane	65.08	62.79
TraesCS7A01G217500.1	Wheat	plasma membrane	17.35	57.93
TraesCS7A01G217400.1	Wheat	plasma membrane	37.24	56.35
Zm00001d012387_P001	Maize	plasma membrane	32.71	56.06
TraesCS7A01G217300.1	Wheat	peroxisome	52.04	54.96
Os06t0296700-01	Rice	plasma membrane	49.61	52.76
Zm00001d028649_P001	Maize	plasma membrane	51.27	51.33
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	30.5	45.17
TraesCS3A01G471000.1	Wheat	plasma membrane	43.54	45.03
Os06t0296100-00	Rice	plasma membrane	43.09	44.47
TraesCS2A01G041700.1	Wheat	plasma membrane	38.9	39.86
TraesCS7A01G040300.1	Wheat	plasma membrane	40.44	38.53
TraesCS7A01G129400.1	Wheat	plasma membrane	38.9	38.05
TraesCS5A01G132400.1	Wheat	plasma membrane	37.68	37.64
TraesCS6A01G354600.1	Wheat	plasma membrane	39.01	37.63
TraesCS2A01G041800.1	Wheat	plasma membrane	38.78	37.54
TraesCS5A01G551500.1	Wheat	plasma membrane	39.01	37.43
TraesCS4A01G395800.1	Wheat	plasma membrane	20.55	37.27
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	40.33	37.09
TraesCS4A01G450000.1	Wheat	plasma membrane	30.61	36.4
TraesCS5A01G358400.1	Wheat	plasma membrane	34.59	36.35
TraesCS4A01G450200.1	Wheat	plasma membrane	41.1	36.33
TraesCS7A01G038500.1	Wheat	plasma membrane	40.66	36.11
TraesCS4A01G449900.1	Wheat	plasma membrane	40.66	36.08
TraesCS4A01G449800.1	Wheat	peroxisome	39.56	36.05
TraesCS7A01G038400.1	Wheat	plasma membrane	40.66	35.97
TraesCS7A01G095400.1	Wheat	plasma membrane	38.9	35.74
TraesCS5A01G551400.1	Wheat	plasma membrane	39.23	35.68
TraesCS4A01G448200.1	Wheat	plasma membrane	35.58	35.11
TraesCS5A01G551600.1	Wheat	plasma membrane	39.67	34.96
TraesCS7A01G216500.1	Wheat	plasma membrane	19.56	33.08
TraesCS7A01G217600.1	Wheat	plasma membrane	35.14	32.78
TraesCS7A01G217700.1	Wheat	plasma membrane	34.36	32.74
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	35.36	32.13
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	5.86	30.29
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	7.96	30.25
TraesCS6A01G354800.1	Wheat	plasma membrane	39.89	29.33
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	7.51	28.1
TraesCS7A01G216700.1	Wheat	plasma membrane	33.81	26.61
TraesCS7A01G217100.1	Wheat	plasma membrane	34.03	26.44
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	8.18	25.87
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	6.63	25.53
TraesCS6A01G395500.1	Wheat	cytosol	4.2	25.33
TraesCS7A01G216300.1	Wheat	plasma membrane	32.93	23.26
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	6.3	23.08
TraesCS7A01G216900.1	Wheat	plasma membrane	20.77	21.89
TraesCS7A01G216600.1	Wheat	cytosol, plastid	13.26	17.73
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.3	15.97

Protein Annotations

EnsemblPlants:TraesCS5A01G042100.1	EnsemblPlantsGene:TraesCS5A01G042100	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5A:+:37963894..37967149

Molecular Weight (calculated)

100602.0 Da

IEP (calculated)

8.159

GRAVY (calculated)

0.154

Length

905 amino acids

Sequence
(BLAST)

001: MQPAAMETGQ GQPWEYRLRK YLLLLATLVA SITYTAGFNP PGGVWQQKGS DEDGHRAGDH IINDTDNRRH LAFFYCNATA FIASLVVIVL ILILAIRHDK
101: DKDKKDAVWV ASGSGVVPLR LVMVLDLLSL VGAYTAGTCR DKVSSLYSAA LVAAIFIYIV LLKLLDLDWW WCFPNESSNS LSTTSELPLP REEMKAEERF
201: RKVLMLLATF AVSITYVAGL STPGGFWDST DGSHRPGDAI LKDHHSLRLM VFLLCNTTAF MASLFITMLL IIDGRKLLGK TARTRELYTC IIVALVSLVA
301: AYAAGSCRKN DTTVYVVSLV GAVLAFILLL VLHRFFYGNS CSSPEQQSDE NQQTSDNASA CTGVFLFFSA WLASFRRRQA GDNASCSASR EALDKTRSLV
401: LLLATLAATI TYSAGLDPPG GLWQDGDMAG NPILLTADAR RYNVFYYCNS VSFVASLVVI ILVQEEILVK HHVLEATMIL DLFGLVGAYA AGSCRNMKQS
501: IYAMALAFAV LGYVVIHVVF FTLDHEEKKN HDNNEDPVLE DRRKLLEERR NQFLDKRRKR LLLFAILAAT ITYQAGLTPP GGFLLQDKLG NHAGDPVLLC
601: NDQRRYKAFF YCNSVSFMLS IALIILLVNP TVYRPAIESN ALSVCTAVGL FCLMGAYAAG STQDDKTSIY IFVLVALVLF VAAGLLVVYF VGERRRNANP
701: AADMRSILEQ DAAKEEEDRK KEEEERKEVE EKKKDAEERK KHARRKYLML VGILVASVAY QAGLEPPGGM WQSSSDEHEA GSPVMQDNMR GRYLFFFYSN
801: SISLVASIVV IIMLLPHWLP KKKEECEDWS LRVMNKTIIL DLVALLGAYA AGSCRGWKTS MYVVALIVAV LGYFAIHMKL SLCRRKNPRR YGSIERQNSQ
901: GNQPV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.