Factsheet for TraesCS6A01G395900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G435700.1	Wheat	plasma membrane	81.82	82.16
TraesCS6A01G395500.1	Wheat	cytosol	37.19	60.0
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	57.44	59.66
HORVU6Hr1G091460.3	Barley	plasma membrane	59.92	55.98
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	47.52	46.56
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	44.21	45.53
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	41.32	28.01
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	14.46	19.02
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	11.57	16.0
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	16.94	14.34
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	13.64	13.87
TraesCS4A01G395800.1	Wheat	plasma membrane	21.9	10.62
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	23.55	9.66
TraesCS7A01G217400.1	Wheat	plasma membrane	22.31	9.03
TraesCS7A01G217300.1	Wheat	peroxisome	30.17	8.52
TraesCS3A01G471000.1	Wheat	plasma membrane	30.58	8.46
TraesCS7A01G040300.1	Wheat	plasma membrane	30.99	7.89
TraesCS6A01G363300.1	Wheat	plasma membrane	27.69	7.89
TraesCS6A01G354600.1	Wheat	plasma membrane	30.58	7.89
TraesCS7A01G216500.1	Wheat	plasma membrane	17.36	7.85
TraesCS6A01G363200.1	Wheat	plasma membrane	28.51	7.76
TraesCS6A01G363100.2	Wheat	plasma membrane	29.75	7.68
TraesCS6A01G363400.1	Wheat	peroxisome	28.1	7.62
TraesCS5A01G551500.1	Wheat	plasma membrane	29.34	7.53
TraesCS5A01G042100.1	Wheat	plasma membrane	28.1	7.51
TraesCS7A01G217700.1	Wheat	plasma membrane	28.93	7.37
TraesCS4A01G450000.1	Wheat	plasma membrane	23.14	7.36
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	30.17	7.33
TraesCS7A01G217600.1	Wheat	plasma membrane	28.93	7.22
TraesCS7A01G129400.1	Wheat	plasma membrane	27.27	7.14
TraesCS2A01G041700.1	Wheat	plasma membrane	26.03	7.13
TraesCS5A01G358400.1	Wheat	plasma membrane	25.21	7.08
TraesCS5A01G132400.1	Wheat	plasma membrane	26.03	6.95
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	28.1	6.91
TraesCS7A01G038400.1	Wheat	plasma membrane	28.93	6.84
TraesCS4A01G449800.1	Wheat	peroxisome	27.69	6.75
TraesCS5A01G551400.1	Wheat	plasma membrane	27.69	6.73
TraesCS5A01G551600.1	Wheat	plasma membrane	28.51	6.72
TraesCS7A01G038500.1	Wheat	plasma membrane	28.1	6.67
TraesCS4A01G450200.1	Wheat	plasma membrane	28.1	6.64
TraesCS7A01G095400.1	Wheat	plasma membrane	26.86	6.6
TraesCS2A01G041800.1	Wheat	plasma membrane	25.21	6.52
TraesCS4A01G449900.1	Wheat	plasma membrane	26.86	6.37
TraesCS4A01G448200.1	Wheat	plasma membrane	23.14	6.11
TraesCS7A01G216900.1	Wheat	plasma membrane	20.66	5.82
TraesCS7A01G216700.1	Wheat	plasma membrane	26.45	5.57
TraesCS7A01G217500.1	Wheat	plasma membrane	5.79	5.17
TraesCS7A01G217100.1	Wheat	plasma membrane	24.79	5.15
TraesCS6A01G354800.1	Wheat	plasma membrane	26.03	5.12
TraesCS7A01G216300.1	Wheat	plasma membrane	26.86	5.07
TraesCS7A01G216600.1	Wheat	cytosol, plastid	6.61	2.36

Protein Annotations

EnsemblPlants:TraesCS6A01G395900.1	EnsemblPlantsGene:TraesCS6A01G395900	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF44	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6A:-:608400576..608401304

Molecular Weight (calculated)

26474.1 Da

IEP (calculated)

6.933

GRAVY (calculated)

0.090

Length

242 amino acids

Sequence
(BLAST)

001: MSEGMTMLGR AGVDGDSPHP GHRETPIDHG PQTSMEELSK VITEANGMPV LFVPSSNGRL VAVPLDTLQN LMPTNRGEGS ESDKEKKEQA FRSWMLLLAS
101: LVATVTFTAG LTPPGGFWST DDKDNKFITG EPIMRDKSRS RYAIFQTGNI MAFYTSLMII GLLAKNRNDK TVISLGFILL VALCFVCLVF SFISGSWQGP
201: IQGAVNVVLV LVLYVFYMTL VRTISWCSST FSRHQGSPDS VP

Best Arabidopsis Sequence Match ( AT4G03440.2 )
(BLAST)

001: MDNSEAHLDR IEAQRSTDDQ HKRRCFPVNV IKNLGTLSSR SFLRRRGDEA TPPTTTIDIE SVPKFLTTLR LLDLYNHPGE YVAMNSEISS AMRAGNKEFL
101: EKMESYETPM SCFKNNKGDS ILHLAAAFGH LELVKSIVSK FPSLLLELNF KDQLPLHVAA RDGHLTVVKA LVASVTFCSD RLAEEDRERL NPYILKDKNG
201: DTALHSALKD LHEKTKELHE KTKDMHWLRR SKSKSLSNES THLMETAACL VNANQDVSFL ANKDEISPLY LAVEAGNVSL VNAMLNSHVN NVQDKTFNLA
301: TQLKGRKSLV HAALKAKNTD VLDVILGKYP SLVKERDEKG RTCLSVGASV GFYQGICKLL DTSTLSIFDC DDDGSFPIHK AVEKGHENVV KELLKRFPDS
401: VEQLNKEGQN IFHISAKSGK STLFLMEHIN KVDTKNHLME EQDMDGNTPL HLATINWRPK TVRMLTKFLS IRKKLLDKHN SVGLRPLDIA EINLQSDYVF
501: RERMTLMVLL GVYNLRQRGI SLLPTSGMTL RSRSEKLGDG EKYKDRVNIL LLVAALVATM TFAAGFTMPG GFSSSAPNTG MAILVDDRYL TTFIMNDTIA
601: MLTSVLAIVA LIWAQLGDPE LAHRAFHLAL PALFVALLFM CFTFFYGVLA TIQHNIVLSR IISFVFIILF IMTGTLLTPY VIPQVYGLPI IGVLTSSYLD
701: FLLLFVNEDD DEKHYTTGSS HTCVKSGESM GSSSGVQAEK SKVL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.