Factsheet for TraesCS4A01G450100.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:

mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G034500.1	Wheat	plasma membrane	88.92	92.01
TraesCS4A01G450200.1	Wheat	plasma membrane	66.56	63.96
TraesCS7A01G038400.1	Wheat	plasma membrane	65.65	63.15
TraesCS4A01G450000.1	Wheat	plasma membrane	48.78	63.07
TraesCS7A01G040300.1	Wheat	plasma membrane	59.55	61.68
TraesCS7A01G038500.1	Wheat	plasma membrane	62.5	60.35
TraesCS4A01G449900.1	Wheat	plasma membrane	61.89	59.71
TraesCS4A01G449800.1	Wheat	peroxisome	59.35	58.81
TraesCS4A01G448200.1	Wheat	plasma membrane	53.35	57.25
TraesCS2A01G041700.1	Wheat	plasma membrane	48.88	54.47
TraesCS3A01G471000.1	Wheat	plasma membrane	47.26	53.14
TraesCS2A01G041800.1	Wheat	plasma membrane	49.29	51.87
Zm00001d045859_P001	Maize	plastid	30.18	50.42
KXG35244	Sorghum	plasma membrane	37.09	49.46
Zm00001d045793_P001	Maize	plasma membrane	41.77	48.18
TraesCS7A01G217400.1	Wheat	plasma membrane	28.25	46.49
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	27.85	46.44
TraesCS7A01G217500.1	Wheat	plasma membrane	12.4	45.02
TraesCS6A01G363300.1	Wheat	plasma membrane	38.82	44.99
TraesCS7A01G217300.1	Wheat	peroxisome	37.8	43.41
TraesCS6A01G363400.1	Wheat	peroxisome	39.23	43.27
TraesCS6A01G363200.1	Wheat	plasma membrane	38.41	42.52
TraesCS6A01G363100.2	Wheat	plasma membrane	39.23	41.15
TraesCS5A01G042100.1	Wheat	plasma membrane	37.09	40.33
TraesCS5A01G551500.1	Wheat	plasma membrane	35.67	37.22
TraesCS7A01G129400.1	Wheat	plasma membrane	34.76	36.97
TraesCS6A01G354600.1	Wheat	plasma membrane	34.25	35.93
TraesCS5A01G358400.1	Wheat	plasma membrane	31.1	35.54
TraesCS7A01G095400.1	Wheat	plasma membrane	35.26	35.23
TraesCS5A01G132400.1	Wheat	plasma membrane	31.91	34.66
TraesCS5A01G551400.1	Wheat	plasma membrane	34.76	34.37
TraesCS4A01G395800.1	Wheat	plasma membrane	17.17	33.87
TraesCS5A01G551600.1	Wheat	plasma membrane	35.26	33.79
TraesCS7A01G217600.1	Wheat	plasma membrane	31.5	31.96
TraesCS7A01G216500.1	Wheat	plasma membrane	17.28	31.78
TraesCS7A01G217700.1	Wheat	plasma membrane	30.59	31.68
TraesCS6A01G354800.1	Wheat	plasma membrane	39.43	31.52
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	5.59	31.43
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	31.3	30.92
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	8.84	30.42
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	7.22	29.83
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	6.91	28.1
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	6.4	26.81
TraesCS7A01G216700.1	Wheat	plasma membrane	30.59	26.17
TraesCS6A01G395500.1	Wheat	cytosol	3.96	26.0
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	6.5	25.91
TraesCS7A01G217100.1	Wheat	plasma membrane	30.08	25.41
TraesCS7A01G216300.1	Wheat	plasma membrane	30.89	23.73
TraesCS7A01G216900.1	Wheat	plasma membrane	18.19	20.84
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.91	19.05
TraesCS7A01G216600.1	Wheat	cytosol, plastid	11.69	16.99

Protein Annotations

EnsemblPlants:TraesCS4A01G450100.2	EnsemblPlantsGene:TraesCS4A01G450100	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4A:+:715804997..715811113

Molecular Weight (calculated)

107135.0 Da

IEP (calculated)

9.621

GRAVY (calculated)

0.243

Length

984 amino acids

Sequence
(BLAST)

001: MAAAGGDSVR RRRRVHTVAD TSPSASLQGD PEIGAASSAE QSQGGGAGPD KHVGVPDISK AGDSKLYEFK EQLLLLSTLV ATVTYVAGLN LPGGSWEQGN
101: PGGHLAGDPI LRDTHYRRYL AFYYCNATAL AASLVVSLIL IILRRKSPVW TAVLQIVMVL DLLSLIGAYG AGSCRDAFTT IYALVVFCVL VVAIISVFFS
201: LMVKALIKWA GKVRAAASPI NTTGGNLRGI LALRRVTTAI KAIESLAADS KDRAEKEMVD VLMLLATFAV TITYVAGLSP PGGFWTNTED GHRLSDPVLQ
301: ARGRYRAFFV CNTTSFALSL LIIVVLLERK MLGKSMLLGR KKMKFGGKSI PKRLAAPCGL IVVALLGLMG AYAAGSCREA DTTVMVLMVP VGVCLLLAIV
401: FHWKPLTKMH YFVLKFFKKL AHLGIPSGTY RDTDDDHLQN TRYLVMLLAT LVVTITYQAG LDPPGGLWQD DRDGHKMGHP VLQTTHPTRY KVFFYSNSAA
501: FITSLVVNMM LQSKFLLTRH TLEVTLVFDL FGLVTAYGAG STRDVITSIY IVALAGIVLV YVIVHIIIRE HDPDPEDHAA LKELDDKRRV LLLVAILAAT
601: LTYQAGLTPP GGFWLADDQG LGLRAGFPVL LHHYPRRYYA FFYCNAASFM ASVTLILLLV NPKLYRPGIR CYALYVCMLV GTFGLMGAYA AGSSRHLKTS
701: IYVLTLVGAV VAFIALLLVL FRLFPLFDKP KEKVPATPKT AEADHSSNKA TSKTAEAGHS SNKSSGSKKK EKLQYLMLLG ILAASMTYQT GLKPPGGLWQ
801: DNNDGHSAGN PILRDINKDR YNAFFYSNSA SFMASVVVVV MLLPLTMLPE KDTKSFEKET KTVMLLQLTM LPVEDPKSPE KETKLSKEDT ESAQKDSKPT
901: DKEPADEGTW PLWPMHTAIL LDMMGLLVAY AAGSTRKWET SRNVMVLIVP VLAYIGLYAA LSVFCHRKEK SKVAADIQDG GAAA

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.