Factsheet for TraesCS6A01G363400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	92.6	94.51
TraesCS6A01G363300.1	Wheat	plasma membrane	69.84	73.38
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	46.52	70.34
TraesCS6A01G363200.1	Wheat	plasma membrane	70.07	70.3
TraesCS6A01G363100.2	Wheat	plasma membrane	68.16	64.82
TraesCS5A01G042100.1	Wheat	plasma membrane	64.46	63.54
TraesCS7A01G217500.1	Wheat	plasma membrane	18.39	60.52
TraesCS7A01G217400.1	Wheat	plasma membrane	40.47	60.37
TraesCS7A01G217300.1	Wheat	peroxisome	55.94	58.23
Zm00001d012387_P001	Maize	plasma membrane	33.74	57.01
Zm00001d028649_P001	Maize	plasma membrane	53.59	52.88
Os06t0296700-01	Rice	plasma membrane	48.88	51.23
TraesCS3A01G471000.1	Wheat	plasma membrane	45.74	46.63
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	31.39	45.83
Os06t0296100-00	Rice	plasma membrane	44.28	45.04
TraesCS2A01G041700.1	Wheat	plasma membrane	41.48	41.9
TraesCS7A01G040300.1	Wheat	plasma membrane	43.39	40.74
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	43.27	39.23
TraesCS2A01G041800.1	Wheat	plasma membrane	41.03	39.14
TraesCS5A01G551500.1	Wheat	plasma membrane	41.14	38.92
TraesCS6A01G354600.1	Wheat	plasma membrane	40.7	38.7
TraesCS5A01G132400.1	Wheat	plasma membrane	39.13	38.52
TraesCS7A01G129400.1	Wheat	plasma membrane	39.69	38.27
TraesCS7A01G038400.1	Wheat	plasma membrane	43.5	37.93
TraesCS7A01G038500.1	Wheat	plasma membrane	43.05	37.68
TraesCS4A01G449800.1	Wheat	peroxisome	41.93	37.66
TraesCS4A01G449900.1	Wheat	plasma membrane	43.05	37.65
TraesCS4A01G450200.1	Wheat	plasma membrane	43.16	37.6
TraesCS4A01G448200.1	Wheat	plasma membrane	38.45	37.4
TraesCS4A01G395800.1	Wheat	plasma membrane	20.74	37.07
TraesCS4A01G450000.1	Wheat	plasma membrane	31.61	37.06
TraesCS5A01G358400.1	Wheat	plasma membrane	35.31	36.59
TraesCS7A01G095400.1	Wheat	plasma membrane	39.8	36.04
TraesCS5A01G551400.1	Wheat	plasma membrane	39.91	35.78
TraesCS5A01G551600.1	Wheat	plasma membrane	40.36	35.05
TraesCS7A01G216500.1	Wheat	plasma membrane	20.29	33.83
TraesCS7A01G217600.1	Wheat	plasma membrane	36.32	33.4
TraesCS7A01G217700.1	Wheat	plasma membrane	35.31	33.16
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	36.66	32.83
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	6.28	32.0
TraesCS6A01G354800.1	Wheat	plasma membrane	42.6	30.87
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	7.85	29.41
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	7.62	28.1
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	8.86	27.62
TraesCS7A01G216700.1	Wheat	plasma membrane	35.43	27.48
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	7.06	26.81
TraesCS7A01G217100.1	Wheat	plasma membrane	34.75	26.61
TraesCS6A01G395500.1	Wheat	cytosol	4.26	25.33
TraesCS7A01G216300.1	Wheat	plasma membrane	35.65	24.82
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	6.84	24.7
TraesCS7A01G216900.1	Wheat	plasma membrane	21.3	22.12
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.95	17.37
TraesCS7A01G216600.1	Wheat	cytosol, plastid	13.12	17.28

Protein Annotations

EnsemblPlants:TraesCS6A01G363400.1	EnsemblPlantsGene:TraesCS6A01G363400	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6A:+:592536400..592539222

Molecular Weight (calculated)

97879.4 Da

IEP (calculated)

9.427

GRAVY (calculated)

0.257

Length

892 amino acids

Sequence
(BLAST)

001: MEPGHVQEAS RQPATEPGHS QQASPQPAMG PGHVQPGPPP PAMDPGHVQP RPPPPAMDLD DIQPGPPQRW EYSLRKYLLL LATLVVTVTY AAGFNPPGGI
101: WQEAHDGQPA GDPIIRYTYY HRYLAFFYCN ATAFAASLVV IVLILILAIR HDKDEKDTLW VVVPLRVFMM LDLLSLMGAY GAGTCQNKVS TIYYAVLVAG
201: VLLYVAVLKL ADRCWKMPAT NLDSGTGGIV ASVSDSDLEV EAKEKQAREK KAEERLCKVL MLLAIFAVSI TYVAGLNTPG GFWDSTGGSH HLGDAILKDH
301: HIIRLTVFLF CNTMAFVASL FITMLLIIDG KNLHKKKARS RMLYGCIVVA LVGLVSAYAT GSCRETDTTV YVVSLVGAVV AYILLHRFCS SASKLFSSCF
401: SPAQQHDENE DNASAREALD KARSLVLLLA TLAAAITYAA GLDPPGGLWQ DNSNGHMAGD PILLTINIAR YRVFYYCNSV AFVASLVAIV LVQKEKLVKH
501: HALEAAMILV LFGLIGAYAA GSCRDVNKSI YAMALAGAVL IYVVIHIVFF TLDDKDKKDN AKEDLLLEKR RKRLLLFAIL AATITYQAGL TPPGGFLLQD
601: DKLGRHHAGD PVLLDNYPRR YNAFFYCNSI SFMLSIALII LLVNPNLYRP AIRSNALSVC TAVGLLCLMG AYAAGSTQHL KTSIYIIVLA VVVLLVAAGL
701: LLVFLLKRHG NSKKSPPSAA IKQKGEKGER KKHARRKYLM LLGILVASVA YQAGLKPPGG TWQSGDSGYE AGNPVMHDNR RPRYLIFFYS NSISFVASIV
801: VIIMLLPQWL RKEQQGEWEK WSLRVMNWTI RLDLFALLGA YAAGSNRGWK TSMYVVALII VVLGYFVIHM KISTCLERRR KKRDAEAAMG II

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.