Factsheet for HORVU6Hr1G091460.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	61.39	68.24
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	60.62	66.53
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	55.98	59.92
HORVU6Hr1G091490.1	Barley	cytosol, peroxisome, plasma membrane	45.17	50.0
HORVU6Hr1G091530.1	Barley	cytosol, peroxisome	44.79	46.59
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	12.74	17.93
HORVU3Hr1G017270.1	Barley	plastid	10.04	14.21
HORVU2Hr1G032190.3	Barley	cytosol	11.58	12.24
HORVU7Hr1G044080.2	Barley	golgi, plasma membrane	16.22	9.52
HORVU1Hr1G003560.1	Barley	cytosol, plasma membrane, vacuole	8.11	8.5
HORVU6Hr1G086570.5	Barley	plasma membrane	23.55	7.29
HORVU7Hr1G021190.5	Barley	nucleus	19.3	7.14
HORVU3Hr1G100030.1	Barley	plastid	24.32	6.85
HORVU2Hr1G020740.1	Barley	plasma membrane	22.39	6.71
HORVU6Hr1G086440.7	Barley	golgi, plasma membrane	22.78	6.32
HORVU7Hr1G044100.8	Barley	cytosol, peroxisome	21.62	6.27
HORVU5Hr1G043010.1	Barley	plasma membrane	21.62	6.15
HORVU7Hr1G044160.1	Barley	plasma membrane	22.39	6.04
HORVU7Hr1G044210.1	Barley	plasma membrane	22.39	6.0
HORVU2Hr1G006360.2	Barley	plasma membrane, vacuole	20.85	5.99
HORVU4Hr1G089880.1	Barley	plasma membrane, vacuole	23.17	5.87
HORVU4Hr1G089890.1	Barley	plasma membrane, vacuole	24.32	5.54
HORVU7Hr1G006800.1	Barley	peroxisome	20.85	5.25
HORVU7Hr1G043810.5	Barley	plasma membrane	23.94	4.62
HORVU7Hr1G043880.1	Barley	plasma membrane	19.69	4.17
HORVU7Hr1G043950.7	Barley	cytosol, plastid	16.99	3.84
HORVU7Hr1G044020.6	Barley	cytosol, peroxisome	3.47	2.84
HORVU2Hr1G078430.3	Barley	peroxisome	3.47	2.84

Protein Annotations

EnsemblPlants:HORVU6Hr1G091460.3	EnsemblPlantsGene:HORVU6Hr1G091460	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:PGG_dom
PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	PFAM:PF13962	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B47D5E9
UniProt:A0A287V6I6	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:575675806..575677387

Molecular Weight (calculated)

28851.3 Da

IEP (calculated)

8.612

GRAVY (calculated)

0.055

Length

259 amino acids

Sequence
(BLAST)

001: MRSTQENKIF YFIELMFVAG NMSEEMSMLG RARVAGDSSH PQHQEIPVAH CPQMWTDELL KVIKEANGMP VLFVPSSDGR LVAVALDRLQ NLMPASREGS
101: ISDEMKEQNF RSWLLLLTSL VATVTFTAGL TPPGGFWSTD DDKDKKYRAG DPVMLNKSTY SPFYTSNTMA FFTSLMIIAS LAKNRNSKKI MTIPFTCLVA
201: TCFICLGSSY ISGTWISGSN PMLQLLPPVV VLGLNIVYMT AHRITEMWSS IIRKLRGSP

Best Arabidopsis Sequence Match ( AT5G54700.2 )
(BLAST)

001: MLEFGEKSTP LDDISEVEND LKLAELVNND GLTPLHCAAV SNSIKILKVF SHKTPSSFDI LTQPHNETVF HLAVRHKNLK AFKFMAQKVH LEKLLYKPDK
101: YGNTVLHTAA SLGSTSLAEY IINETKIHTK AKNIQGLAAV DLLDKDDANF PSIALKFGGE SHKEESVMHS EALQNARNTI TVVAILIASV TFAVGMNPPG
201: GIYQESTSSK GKSVAAKTVA FKIFYVSNSI ALFTSLWIVI LLVSIIPFKP KSLKNVLVIT HKMMSVSVAA LATSYVAVGW IILPHFEGTK WLLYTTLGIS
301: IVMRGGMYVF LWFKLAKHIL RKIDTERDPD EEAATGKGYV MYWKS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4K1T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.