Factsheet for HORVU3Hr1G017270.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	94.54	95.58
TraesCS2B01G023700.1	Wheat	vacuole	81.97	93.75
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	85.79	89.71
HORVU2Hr1G032190.3	Barley	cytosol	56.83	42.45
HORVU1Hr1G003560.1	Barley	cytosol, plasma membrane, vacuole	48.09	35.63
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	24.04	23.91
HORVU6Hr1G091490.1	Barley	cytosol, peroxisome, plasma membrane	15.3	11.97
HORVU6Hr1G091530.1	Barley	cytosol, peroxisome	14.21	10.44
HORVU6Hr1G091460.3	Barley	plasma membrane	14.21	10.04
HORVU7Hr1G044080.2	Barley	golgi, plasma membrane	23.5	9.75
HORVU2Hr1G020740.1	Barley	plasma membrane	33.33	7.05
HORVU7Hr1G021190.5	Barley	nucleus	26.23	6.86
HORVU6Hr1G086570.5	Barley	plasma membrane	30.05	6.57
HORVU2Hr1G006360.2	Barley	plasma membrane, vacuole	32.24	6.55
HORVU3Hr1G100030.1	Barley	plastid	32.24	6.41
HORVU5Hr1G043010.1	Barley	plasma membrane	31.15	6.26
HORVU7Hr1G044210.1	Barley	plasma membrane	32.24	6.11
HORVU6Hr1G086440.7	Barley	golgi, plasma membrane	31.15	6.1
HORVU7Hr1G044160.1	Barley	plasma membrane	31.69	6.04
HORVU7Hr1G006800.1	Barley	peroxisome	33.88	6.03
HORVU7Hr1G044100.8	Barley	cytosol, peroxisome	27.87	5.71
HORVU4Hr1G089880.1	Barley	plasma membrane, vacuole	30.6	5.47
HORVU4Hr1G089890.1	Barley	plasma membrane, vacuole	31.15	5.01
HORVU7Hr1G043810.5	Barley	plasma membrane	27.32	3.73
HORVU7Hr1G043880.1	Barley	plasma membrane	22.95	3.43
HORVU7Hr1G043950.7	Barley	cytosol, plastid	20.77	3.31
HORVU2Hr1G078430.3	Barley	peroxisome	4.37	2.52
HORVU7Hr1G044020.6	Barley	cytosol, peroxisome	3.28	1.89

Protein Annotations

EnsemblPlants:HORVU3Hr1G017270.1	EnsemblPlantsGene:HORVU3Hr1G017270	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:PGG_dom
PANTHER:PTHR24177	PANTHER:PTHR24177:SF15	PFAM:PF13962	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B473EF9
UniProt:A0A287K9Q6	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:43597427..43598150

Molecular Weight (calculated)

19335.1 Da

IEP (calculated)

9.468

GRAVY (calculated)

0.640

Length

183 amino acids

Sequence
(BLAST)

001: MSSAVAPATQ QAPAALQATP PGPVTESIRE LRGWLMVLAT VIASITYTSG LSPPGGFERV KKPLLKDPKR PPAVSGTEML PSLYLVSPAR CRVFYYANTA
101: ALALSLSLIL LLGSQDLRRL ARVKALEILV ALDVVALLVA YLAGAGSFGD LQLVVCAGVV LVVPLALVAM SSRLCGKYFW DEL

Best Arabidopsis Sequence Match ( AT5G54710.1 )
(BLAST)

001: MKINKQGQTA FILACLNNHL DAALTLVENM RSMTMVELDA AFTGQQPVII DKMLEKFPSL VLDVDEEQST LLHKAVTQRN EEYATKVIDL CPSLVSVTNV
101: DGNTPLHLAA EIGNINILWK MLETGEAECM KINKQGQTAF ILACLNNNVN SARILVEGTS SMTMVELNAA FSEQQQVIID SILEKFPNLI LDADEEQSTL
201: LHKACKSGNL EMARTLLDVD VNQEIAEKVD KDGLTPLHRA VINGSVEILK EFLCKAPSSF NITTQGTIET VFHLAAKYQK TKAFIFMAQS ANIRQLLYSL
301: DAEDNTVLHV AASVDSTSLV RHILSETTID VTLKNKKGFA AVDLIDKEGV DFPLLSLWFR DEAEKIQRPA RYVKFAHEPV ELIRNTNNGE KLSSESRAMD
401: LLREGRDPRN KEREMHSESL QNARNTITIV AVLIASVAFT CGINPPGGVH QDGPFIGKAT AGRTLAFKIF SVANNIALFT SLSIVTLLVS IISYRTKALK
501: MCVVIAHKMM WLAVASMATA YAASAWITVP HNEGSKWLVY TTSAIASVAL GSMFVYVSFM MVKHILKKDK LRRNQSHGKT PSTTLDMEAA GDVGCYWF

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT5G54710]
SUBAcon: [cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.