Factsheet for TraesCS6D01G346900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	97.43	96.44
TraesCS6D01G347000.1	Wheat	plasma membrane	32.36	80.77
TraesCS6B01G397400.1	Wheat	plasma membrane	95.03	67.77
TraesCS6D01G346300.1	Wheat	plasma membrane	74.32	59.21
Zm00001d012387_P001	Maize	plasma membrane	51.54	57.01
TraesCS6D01G346500.2	Wheat	plasma membrane	80.48	50.92
TraesCS6D01G346600.1	Wheat	plasma membrane	72.6	49.65
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	71.58	47.83
TraesCS6D01G346400.1	Wheat	plasma membrane	72.43	47.58
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	49.49	47.3
TraesCS7D01G147300.1	Wheat	plasma membrane	63.53	42.55
TraesCS7D01G218900.1	Wheat	peroxisome	60.96	41.83
TraesCS7D01G219000.1	Wheat	peroxisome	62.33	41.79
TraesCS7D01G219100.1	Wheat	peroxisome	59.76	40.49
TraesCS2D01G040500.1	Wheat	plasma membrane	32.36	40.04
Zm00001d028649_P001	Maize	plasma membrane	59.42	38.38
Os06t0296700-01	Rice	plasma membrane	55.48	38.07
TraesCS7D01G218600.1	Wheat	plasma membrane	51.2	33.04
TraesCS3D01G466700.1	Wheat	plasma membrane	49.32	32.88
Os06t0296100-00	Rice	plasma membrane	48.29	32.16
TraesCS7D01G218700.1	Wheat	plasma membrane	50.34	31.51
TraesCS6D01G337000.1	Wheat	plasma membrane	45.38	29.31
TraesCS7D01G035200.1	Wheat	plasma membrane	46.58	28.63
TraesCS2D01G040400.1	Wheat	plasma membrane	44.35	28.62
TraesCS7D01G034500.1	Wheat	plasma membrane	46.4	28.5
TraesCS7D01G219600.1	Wheat	plasma membrane	38.36	28.28
TraesCS7D01G034700.1	Wheat	plasma membrane	45.21	27.56
TraesCS7D01G034600.1	Wheat	plasma membrane	46.92	27.45
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	8.39	27.07
TraesCS5D01G140600.1	Wheat	plasma membrane	39.73	26.73
TraesCS4D01G343500.2	Wheat	plasma membrane	42.81	26.62
TraesCS7D01G091400.1	Wheat	plasma membrane	43.32	26.22
TraesCS4D01G348800.1	Wheat	plasma membrane	38.36	25.99
TraesCS7D01G219200.1	Wheat	peroxisome	32.19	25.44
TraesCS7D01G128400.1	Wheat	mitochondrion	43.49	24.95
TraesCS2D01G482300.1	Wheat	plasma membrane	42.81	23.95
TraesCS7D01G219400.1	Wheat	peroxisome	39.04	23.68
TraesCS7D01G219500.1	Wheat	peroxisome	33.39	22.83
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	9.76	22.53
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	10.96	22.46
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	9.42	22.18
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	8.73	21.7
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	7.88	19.74
TraesCS6D01G380600.1	Wheat	peroxisome	7.53	19.38
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	8.05	19.11
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	36.13	19.06
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	36.99	18.14
TraesCS7D01G218300.1	Wheat	plasma membrane	34.25	17.83
TraesCS7D01G218100.1	Wheat	plasma membrane	36.47	17.0
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	5.14	16.95

Protein Annotations

EnsemblPlants:TraesCS6D01G346900.1	EnsemblPlantsGene:TraesCS6D01G346900	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:+:445893465..445895353

Molecular Weight (calculated)

64746.4 Da

IEP (calculated)

8.839

GRAVY (calculated)

0.273

Length

584 amino acids

Sequence
(BLAST)

001: MLLIIDGKKL RKKKTTRSRM LCGCIVVALV GLVGAYIAGS CREIDTTAYV ASLVGAVLAI AHIILLYGIY TSTQQTEEIQ QTDDNVSTIQ CSGKEVLDKA
101: RSLVLLLATL AAAITYTAGL KPPGGLWQDN TKGNMAGDPI LLTTNASRYK AFFYCNSVAF VASLVAIVLV QMEILVKHHV LEAAMILDLF GLIGAYAAGS
201: CRDANNSIYV MALAGLVLVY VVIHVIFFTL DHEDKHHGDQ ANQLLEKRRK RLLLFAILAA TITYQAGLTP PGGFLLQDDK LGHQAGDPVL LYNFPRRYKA
301: FFYCNSVSFM LSISLILLLV NPNLYRPAIR SNALSVCTAV GLFCLMVAYA AGSTQHLKTS IYIFVLVGAV LFVAAGLLLV FALREQNNSD NSAVAAPSIS
401: HEQEEEEEER NKEEERKKHA RRKYLMLLGI LVASVAYQAG LEPPGGAWQS SGNGYEAGDP VMHDIRRPRY LVFFYSNSFS FVASIVVIMM LLPHWLPNEK
501: KEEWEKWSLR VMNWTILLDL VTLLVAYAAG SSRGWKTSVY VGTLILAVLG YFAIHMTLSI WSDRCHRHRL RRERLEGSQE NRRV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.