Factsheet for TraesCS6B01G016300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 2
plasma membrane 2
extracellular 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	92.68	88.89
TraesCS2B01G023700.1	Wheat	vacuole	64.63	66.25
TraesCS2B01G199100.1	Wheat	plastid	54.27	64.03
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	54.27	35.46
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	23.78	21.2
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	25.61	16.67
TraesCS6B01G435100.1	Wheat	plastid	18.9	13.3
TraesCS6B01G435700.1	Wheat	plasma membrane	17.68	12.03
TraesCS6B01G435300.1	Wheat	plasma membrane	17.07	11.81
TraesCS6B01G436000.1	Wheat	plasma membrane	17.07	11.72
TraesCS6B01G397700.1	Wheat	plasma membrane	14.63	11.71
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	15.85	11.06
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	17.07	10.61
TraesCS6B01G435400.1	Wheat	mitochondrion	15.85	10.4
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	14.02	9.75
TraesCS2B01G054300.1	Wheat	plasma membrane	28.05	8.61
TraesCS4B01G387200.1	Wheat	plasma membrane	22.56	7.01
TraesCS3B01G513700.1	Wheat	plasma membrane	30.49	6.61
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	23.78	6.31
TraesCS7B01G048200.1	Wheat	plasma membrane	26.83	6.25
TraesCS7B01G029500.1	Wheat	plasma membrane	27.44	6.2
TraesCS3B01G595400.1	Wheat	plasma membrane	29.88	5.7
TraesCS6B01G397900.1	Wheat	cytosol, plastid	27.44	5.57
TraesCS2B01G139800.1	Wheat	plasma membrane	28.66	5.57
TraesCS6B01G397400.1	Wheat	plasma membrane	27.44	5.49
TraesCS6B01G398200.1	Wheat	plasma membrane	29.27	5.41
TraesCS6B01G396800.1	Wheat	plasma membrane	29.27	5.4
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	22.56	5.37
TraesCS2B01G065700.1	Wheat	plasma membrane	21.95	5.34
TraesCS6B01G397000.1	Wheat	plasma membrane	27.44	5.33
TraesCS6B01G397300.1	Wheat	plasma membrane	27.44	5.29
TraesCS7B01G124300.1	Wheat	plasma membrane	29.88	5.26
TraesCS7B01G124200.1	Wheat	plasma membrane	28.66	5.19
TraesCS5B01G132500.1	Wheat	plasma membrane	28.66	5.18
TraesCS6B01G003300.1	Wheat	plasma membrane	28.05	5.12
TraesCS6B01G398300.1	Wheat	plasma membrane	27.44	5.11
TraesCS7B01G124800.1	Wheat	peroxisome	19.51	5.03
TraesCS6B01G398100.1	Wheat	plasma membrane	28.05	4.96
TraesCS6B01G396900.1	Wheat	plasma membrane	28.05	4.95
TraesCS6B01G387600.1	Wheat	plasma membrane	26.83	4.93
TraesCS2B01G054200.1	Wheat	plasma membrane	26.22	4.92
TraesCS7B01G124400.1	Wheat	plasma membrane	27.44	4.84
TraesCS6B01G396700.1	Wheat	plasma membrane	27.44	4.82
TraesCS7B01G124500.1	Wheat	plasma membrane	28.05	4.73
TraesCS2B01G508600.1	Wheat	plasma membrane	28.66	4.55
TraesCS7B01G124700.1	Wheat	plasma membrane	27.44	4.48
TraesCS7B01G124600.1	Wheat	plasma membrane	28.05	4.48
TraesCS6B01G436200.1	Wheat	cytosol	7.93	3.98
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	23.78	3.26
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	7.32	3.22
TraesCS7B01G124000.1	Wheat	plasma membrane	16.46	3.16
TraesCS7B01G123500.1	Wheat	plasma membrane	23.17	3.0
TraesCS7B01G123700.1	Wheat	plasma membrane	20.73	2.95
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	20.73	2.78
TraesCS5B01G345200.1	Wheat	plasma membrane	0.61	0.41

Protein Annotations

EnsemblPlants:TraesCS6B01G016300.1	EnsemblPlantsGene:TraesCS6B01G016300	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF62	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6B:+:9929608..9930321

Molecular Weight (calculated)

17439.9 Da

IEP (calculated)

6.419

GRAVY (calculated)

0.896

Length

164 amino acids

Sequence
(BLAST)

001: MVLATVIASI TYASGLSPPG SFEKVPEQIV RVPSPPPPPP SLIPPDISDP TIPPTTYGEQ MIPLLFIVSP TRCRIFYYSN TAAFALSLSI ILLLASQDLL
101: RLAKIKALEI LVALNVMALL VAYVAAASFG SVQLLVCVGL VLAVPVALVV MSSRLCGNYF WDGL

Best Arabidopsis Sequence Match ( AT5G54710.1 )
(BLAST)

001: MKINKQGQTA FILACLNNHL DAALTLVENM RSMTMVELDA AFTGQQPVII DKMLEKFPSL VLDVDEEQST LLHKAVTQRN EEYATKVIDL CPSLVSVTNV
101: DGNTPLHLAA EIGNINILWK MLETGEAECM KINKQGQTAF ILACLNNNVN SARILVEGTS SMTMVELNAA FSEQQQVIID SILEKFPNLI LDADEEQSTL
201: LHKACKSGNL EMARTLLDVD VNQEIAEKVD KDGLTPLHRA VINGSVEILK EFLCKAPSSF NITTQGTIET VFHLAAKYQK TKAFIFMAQS ANIRQLLYSL
301: DAEDNTVLHV AASVDSTSLV RHILSETTID VTLKNKKGFA AVDLIDKEGV DFPLLSLWFR DEAEKIQRPA RYVKFAHEPV ELIRNTNNGE KLSSESRAMD
401: LLREGRDPRN KEREMHSESL QNARNTITIV AVLIASVAFT CGINPPGGVH QDGPFIGKAT AGRTLAFKIF SVANNIALFT SLSIVTLLVS IISYRTKALK
501: MCVVIAHKMM WLAVASMATA YAASAWITVP HNEGSKWLVY TTSAIASVAL GSMFVYVSFM MVKHILKKDK LRRNQSHGKT PSTTLDMEAA GDVGCYWF

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT5G54710]
SUBAcon: [cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.