Factsheet for TraesCS2B01G054300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G040500.1	Wheat	plasma membrane	80.34	90.89
TraesCS2A01G041800.1	Wheat	plasma membrane	94.38	53.9
TraesCS2B01G054200.1	Wheat	plasma membrane	76.78	46.91
TraesCS2B01G199100.1	Wheat	plastid	10.11	38.85
TraesCS3B01G513700.1	Wheat	plasma membrane	50.37	35.53
TraesCS7B01G124300.1	Wheat	plasma membrane	54.31	31.12
TraesCS2B01G065700.1	Wheat	plasma membrane	38.2	30.27
TraesCS7B01G048200.1	Wheat	plasma membrane	39.51	29.97
TraesCS2B01G023700.1	Wheat	vacuole	8.8	29.38
TraesCS7B01G029500.1	Wheat	plasma membrane	39.14	28.79
TraesCS6B01G016300.1	Wheat	plastid	8.61	28.05
TraesCS6B01G397400.1	Wheat	plasma membrane	42.7	27.84
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	8.8	27.49
KXG35244	Sorghum	plasma membrane	37.83	27.37
TraesCS6B01G397900.1	Wheat	cytosol, plastid	41.39	27.35
Zm00001d045793_P001	Maize	plasma membrane	43.63	27.32
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	35.02	27.14
TraesCS6B01G387600.1	Wheat	plasma membrane	44.76	26.76
TraesCS6B01G397000.1	Wheat	plasma membrane	41.39	26.15
TraesCS6B01G397300.1	Wheat	plasma membrane	41.2	25.85
TraesCS7B01G124200.1	Wheat	plasma membrane	43.63	25.75
TraesCS6B01G396800.1	Wheat	plasma membrane	42.51	25.53
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	29.21	25.24
TraesCS6B01G398200.1	Wheat	plasma membrane	41.95	25.23
TraesCS6B01G398300.1	Wheat	plasma membrane	41.2	24.97
TraesCS7B01G124400.1	Wheat	plasma membrane	43.07	24.76
Zm00001d045859_P001	Maize	plastid	27.15	24.62
TraesCS6B01G398100.1	Wheat	plasma membrane	41.57	23.95
TraesCS2B01G139800.1	Wheat	plasma membrane	37.64	23.82
TraesCS6B01G396900.1	Wheat	plasma membrane	41.39	23.79
TraesCS6B01G396700.1	Wheat	plasma membrane	41.39	23.69
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	11.05	23.41
TraesCS6B01G003300.1	Wheat	plasma membrane	38.02	22.61
TraesCS5B01G132500.1	Wheat	plasma membrane	37.64	22.16
TraesCS6B01G397700.1	Wheat	plasma membrane	8.05	20.98
TraesCS3B01G595400.1	Wheat	plasma membrane	33.33	20.7
TraesCS6B01G435700.1	Wheat	plasma membrane	9.18	20.33
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	9.55	20.32
TraesCS2B01G508600.1	Wheat	plasma membrane	38.95	20.12
TraesCS6B01G435100.1	Wheat	plastid	8.61	19.74
TraesCS7B01G124700.1	Wheat	plasma membrane	34.64	18.43
TraesCS7B01G124500.1	Wheat	plasma membrane	33.33	18.29
TraesCS7B01G124600.1	Wheat	plasma membrane	34.08	17.72
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	7.68	17.45
TraesCS6B01G435300.1	Wheat	plasma membrane	7.68	17.3
TraesCS6B01G435400.1	Wheat	mitochondrion	7.87	16.8
TraesCS6B01G436000.1	Wheat	plasma membrane	6.93	15.48
TraesCS7B01G123700.1	Wheat	plasma membrane	32.58	15.08
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	33.33	14.9
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	32.21	14.05
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	6.18	13.98
TraesCS7B01G123500.1	Wheat	plasma membrane	32.21	13.56
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	6.55	13.26
TraesCS7B01G124800.1	Wheat	peroxisome	15.73	13.21
TraesCS4B01G387200.1	Wheat	plasma membrane	10.86	10.98
TraesCS6B01G436200.1	Wheat	cytosol	3.75	6.12
TraesCS7B01G124000.1	Wheat	plasma membrane	8.8	5.5
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	2.81	4.02
TraesCS5B01G345200.1	Wheat	plasma membrane	0.56	1.24

Protein Annotations

EnsemblPlants:TraesCS2B01G054300.1	EnsemblPlantsGene:TraesCS2B01G054300	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2B:+:26508986..26510590

Molecular Weight (calculated)

58698.7 Da

IEP (calculated)

9.691

GRAVY (calculated)

0.169

Length

534 amino acids

Sequence
(BLAST)

001: MVLASFAVSI TYQAGLDPPG GLWQDKLDGH KIGQPVLRTT HPTRYQVFFY SNSAAFVTSL VVVMMVQSKF LLKRRTLVAA MVLDLLGLVI AYAAGCTRDT
101: STSIYVVAVA CLVLSYAVVH ISLGGERENM VTRPVHDPDP AMVAPDPAMV APAPATPAPA PALHVGGGGG GPRRPQRTPR SKEQLDDKRQ VLLLIAILAA
201: ALTYQAGLTP SGGFWQVDDE KLGHRAGYPV LLDNYPRRYK AFFYCNTASF MSSVALILLL VNRKLYRPGI RCYALHVCMA VGMFALMGAY AAGSSRHLKT
301: SIYVLTLVAV VSASIPLQVA IFWYFGNCMD NRQDPPRIRR RRARGQDDPD KEKDEELEYL MLLAVLAASV TYQNGLRPAG GMWQEDNAAY SAGNPILRDI
401: NKRRYDIFLY SNSTSFMASV VAIVMLLPLT LSDDVRWLQR CLPFHRVDLK WSLWPVHTAI LLDMLGLLVA YAAGSTKKWE SSRNVILLVL PVLAYIALYA
501: MAAAIYIYIR RGSSQSQSPS RQAGQQATSV ESSS

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.