Factsheet for TraesCS6B01G003300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 6
extracellular 4
endoplasmic reticulum 5
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G345200.1	Wheat	plasma membrane	17.82	66.39
TraesCS7D01G219200.1	Wheat	peroxisome	43.65	53.04
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	29.84	43.37
TraesCS6B01G397000.1	Wheat	plasma membrane	39.76	42.25
TraesCS3B01G513700.1	Wheat	plasma membrane	35.41	42.01
TraesCS6B01G397300.1	Wheat	plasma membrane	39.64	41.83
OQU85243	Sorghum	plasma membrane	38.86	41.11
TraesCS6B01G396800.1	Wheat	plasma membrane	39.76	40.16
TraesCS6B01G398300.1	Wheat	plasma membrane	39.2	39.95
TraesCS7B01G124200.1	Wheat	plasma membrane	40.2	39.89
TraesCS6B01G398200.1	Wheat	plasma membrane	39.31	39.75
TraesCS7B01G124300.1	Wheat	plasma membrane	40.98	39.48
TraesCS6B01G397900.1	Wheat	cytosol, plastid	35.52	39.48
TraesCS6B01G398100.1	Wheat	plasma membrane	40.53	39.27
TraesCS6B01G396900.1	Wheat	plasma membrane	40.09	38.75
TraesCS6B01G396700.1	Wheat	plasma membrane	39.53	38.05
TraesCS2B01G054300.1	Wheat	plasma membrane	22.61	38.02
TraesCS7B01G048200.1	Wheat	plasma membrane	29.73	37.93
TraesCS7B01G124400.1	Wheat	plasma membrane	39.2	37.89
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	15.59	37.53
TraesCS2B01G199100.1	Wheat	plastid	5.79	37.41
Os06t0296900-00	Rice	plasma membrane	39.76	37.34
TraesCS2B01G139800.1	Wheat	plasma membrane	34.97	37.2
TraesCS6B01G387600.1	Wheat	plasma membrane	36.97	37.18
TraesCS2B01G054200.1	Wheat	plasma membrane	35.75	36.73
TraesCS6B01G397400.1	Wheat	plasma membrane	33.41	36.63
TraesCS2B01G065700.1	Wheat	plasma membrane	26.95	35.91
TraesCS7B01G029500.1	Wheat	plasma membrane	27.95	34.57
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	25.72	33.53
TraesCS5B01G132500.1	Wheat	plasma membrane	33.85	33.52
TraesCS4B01G387200.1	Wheat	plasma membrane	19.49	33.14
TraesCS2B01G023700.1	Wheat	vacuole	5.79	32.5
TraesCS7B01G124800.1	Wheat	peroxisome	22.61	31.92
TraesCS3B01G595400.1	Wheat	plasma membrane	30.51	31.86
TraesCS2B01G508600.1	Wheat	plasma membrane	35.86	31.14
TraesCS7B01G124500.1	Wheat	plasma membrane	33.41	30.83
TraesCS7B01G124700.1	Wheat	plasma membrane	33.52	29.98
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	5.68	29.82
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	8.35	29.76
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	8.13	29.08
TraesCS7B01G124600.1	Wheat	plasma membrane	32.63	28.53
TraesCS6B01G016300.1	Wheat	plastid	5.12	28.05
TraesCS6B01G397700.1	Wheat	plasma membrane	6.12	26.83
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	33.18	24.94
TraesCS7B01G123700.1	Wheat	plasma membrane	31.63	24.61
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	31.96	23.45
TraesCS6B01G435700.1	Wheat	plasma membrane	6.24	23.24
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	6.01	22.98
TraesCS7B01G123500.1	Wheat	plasma membrane	32.29	22.87
TraesCS6B01G436000.1	Wheat	plasma membrane	5.79	21.76
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	5.68	21.61
TraesCS6B01G435400.1	Wheat	mitochondrion	6.01	21.6
TraesCS6B01G435300.1	Wheat	plasma membrane	5.68	21.52
TraesCS6B01G435100.1	Wheat	plastid	5.23	20.17
TraesCS7B01G124000.1	Wheat	plasma membrane	18.71	19.65
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	5.12	17.42
TraesCS6B01G436200.1	Wheat	cytosol	5.01	13.76

Protein Annotations

EnsemblPlants:TraesCS6B01G003300.1	EnsemblPlantsGene:TraesCS6B01G003300	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6B:-:2464723..2467750

Molecular Weight (calculated)

97736.8 Da

IEP (calculated)

8.406

GRAVY (calculated)

0.437

Length

898 amino acids

Sequence
(BLAST)

001: MAPDSSIIFE LRKYVMFMAI LTATVTYVAG LNPPGGVWLR TEDDHLAGNQ ILVVTDHQRY NAFYYSNGTA FMASVVAILL LLLLERKMDK LRLLVVLRYV
101: MVLDLFALLV AYTAGASRGT ATTVFASMLA SKVFVYVTGY AAPHLLGSIP DHDELSLEAK SRLVQRRKIL ILFCIFAATV TYTAGLNPPG GFWADAKEAG
201: HRPGSPVMHS RRFMAFFICN TVTFIASLMA MLMLLTTIRS EFRQGAEFAH IRRWWYVLYG EILATLLGLL VAYALGSCRK THSTIYVFCL VLPVLLYTLI
301: QLLIQRYCWD KLVGLAKKIQ RHLTCCWTGL SSGFNLCWNG LRSCWTDPIQ QNARRQDNSG TGTAPAQMAH TMVLLLATLA VTITYQAGMN PPGGFWPDDG
401: DGHKGGDPIL LTTHLGRYRA FFYCNTVALV ASIVVIFMVL NSHVRIAVHK HHALEAAMLL DLLSLTAAYA VGCGRDVDTS LRLIAVGGAI LAYVVIHIVF
501: FTLETTRSEE PAVMKKKRKL LLLFAILVVT ITYQAGLTPP GSFWLKGDSA GYPVISSNYP GRYTAFFYCN AASFMSSVVI IILLVNPHMY ELGIKCHALY
601: LCAVSGLVGL ISAYAAGSSR HMRTSIFVVA LAGAVVVFIV LLLLALKFLF PTPAAAPDPE ATQPASVAPE QETTAPATAD PDATQPATVA PEQETTAPAP
701: AAPGQETIRP APAAEGQTDK YTRRKCLMLV SILVASVTYQ AGLNPPGGVW PDSIDGHAAG GPVLHDSNKR RYHFFFYSNS VSFLAAIVVI FLLQLDELLG
801: VGSEGLLRVA QSSILLALLG LLFAYASGSS REWDTFGHMV ALTVVVLLYI AIHVLLSCRH DNSSHNPSAD RSITRERVLP TDAYQEPSVG GMSVVSGD

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.