Factsheet for Os06t0294000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0682000-01	Rice	plasma membrane	35.08	51.6
Os06t0293500-01	Rice	plasma membrane	44.12	47.31
TraesCS7B01G124200.1	Wheat	plasma membrane	46.3	46.96
Os06t0296700-01	Rice	plasma membrane	43.46	46.89
TraesCS7D01G218600.1	Wheat	plasma membrane	45.64	46.3
Os06t0295000-01	Rice	cytosol, peroxisome, plasma membrane	21.35	45.16
TraesCS2B01G139800.1	Wheat	plasma membrane	40.41	43.96
Os11t0220600-00	Rice	mitochondrion, plasma membrane	12.96	43.27
HORVU2Hr1G020740.1	Barley	plasma membrane	40.74	43.24
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	28.21	42.39
Os11t0220500-00	Rice	plasma membrane	38.78	41.98
Os06t0296100-00	Rice	plasma membrane	40.09	41.96
OQU84100	Sorghum	plasma membrane	41.83	41.6
Os06t0294400-00	Rice	plasma membrane	28.87	41.21
Os06t0296900-00	Rice	plasma membrane	42.7	41.0
Os06t0293100-00	Rice	cytosol	21.02	39.31
Os06t0293000-00	Rice	vacuole	11.66	37.41
Os11t0144900-01	Rice	plasma membrane	34.86	36.12
Os12t0141000-01	Rice	plasma membrane	8.82	35.06
Os06t0297400-03	Rice	plasma membrane	36.93	35.02
Os06t0292100-00	Rice	plasma membrane	33.01	32.58
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	6.32	31.52
Os06t0285900-00	Rice	nucleus	7.95	31.33
Os06t0291800-00	Rice	plasma membrane	33.66	27.32
Os06t0286146-00	Rice	nucleus	7.63	25.36
Os06t0292400-00	Rice	plasma membrane	32.24	24.3
Os06t0294200-01	Rice	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.2	EntrezGene:4340798	EMBL:AK067472	ProteinID:BAD53439.1	ProteinID:BAF19341.1	ProteinID:BAS97323.1
ProteinID:EAZ36696.1	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os06g0294000	EnsemblPlants:Os06t0294000-01	PFAM:PF13962	InterPro:PGG_dom
PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	UniProt:Q5ZA84	TMHMM:TMhelix	UniParc:UPI0000446D39	RefSeq:XP_015644410.1
SEG:seg	:	:	:	:	:

Description

Conserved hypothetical protein. (Os06t0294000-01)

Coordinates

chr6:-:10806442..10809643

Molecular Weight (calculated)

100350.0 Da

IEP (calculated)

6.922

GRAVY (calculated)

0.070

Length

918 amino acids

Sequence
(BLAST)

001: MSSTNKIDTH NRNGSSKEKK SNPSSSSEYQ LKNHLLLLAT LVATVTYAAG LNLPGGFWQD TQEDHLAGDP ILPGNHKEQY IMFYYCNATA FAASLVVCLL
101: LLVLDKENSG CAAALRVVML FDLLGLMGAY AAGSCRDEFT TIYSSVIMSM VFAYIVPSLF TYAVSKLKKK DKNHGKQNKD SGEPKDTEKQ TWYPDEHKRE
201: ELHEVLMLLA TFAVTITYVA GLNPPGGFWG STQDGHRVSN PVLQDINSRR YKAFFVCNTT AFVASLLIIM LLLDKRVNTE QMSLQFGELY GSIVVVLFGL
301: VGAYAAGSCR DTDDTVYVIC LIAAILAYIF LQVAVTQFLK KRIKNDGHTE RSISSVKSLI RNEDGSRNTK RNIAMEKARS LVMLLATLAA SITYQAGLDP
401: PGGLWPDDRD GHKGGDPILL TTNPARYKVF FYSNSVAFVT SLVAIIMVQS KHVLKNHTLE AAMLLDLFAL ITAYAAGSCR DVSTSIYVVA LAGGVLVYVV
501: IHIIFFTLDN MDNEYHDPDE EDKKREVLLL LAILVATLTY QAGLTPPGGF WSEDDNLGHH HRAGYPILLE NYPPQYEAFF YCNATSFMAS IALIMLLVNP
601: NLYRPGIKCY ALYVCMVAGM FGLMGAYAAG SSRRLRTSIY VLTLVGAVFA LVALQVAMFW NKRTSKTGGN MTNSSAQEGG STDTEASQPA PLIKGMGSTS
701: QATQITDITD AALRNTDKGE GSSEQGGSRI NSVTSEPGAH GTGNGASLQE ANSEEDKSGS TEKDMREYLM LLGVLAASVT YQAGLKPPGG LWQENGNGHL
801: AGHYILHDIN KRRYYAFFYS NSISFMASIV VIALLLPRML NNLEIPVWPM HTAILLDMLG LLCAYAAGST MRWETSRNII ALVIPVLVYM AACTALSFFH
901: KEDQKQISAS TCQASTNS

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.