Factsheet for Os06t0297400-03

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1
plasma membrane 2
plastid 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76269	Sorghum	plasma membrane	63.22	73.73
HORVU7Hr1G044160.1	Barley	plasma membrane	66.01	66.56
TraesCS7D01G219400.1	Wheat	peroxisome	66.01	66.36
TraesCS7A01G217700.1	Wheat	plasma membrane	64.88	66.11
TraesCS7B01G124500.1	Wheat	plasma membrane	66.22	65.88
TraesCS7A01G217600.1	Wheat	plasma membrane	66.01	65.88
HORVU7Hr1G044210.1	Barley	plasma membrane	65.7	65.84
TraesCS7B01G124700.1	Wheat	plasma membrane	65.81	63.45
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	65.19	63.35
TraesCS7B01G124600.1	Wheat	plasma membrane	66.22	62.41
Os12t0141000-01	Rice	plasma membrane	11.57	48.48
Os11t0144900-01	Rice	plasma membrane	42.36	46.28
Os06t0293100-00	Rice	cytosol	22.42	44.2
Os06t0293000-00	Rice	vacuole	12.19	41.26
Os11t0682000-01	Rice	plasma membrane	25.62	39.74
Os06t0296700-01	Rice	plasma membrane	34.92	39.72
Os06t0293500-01	Rice	plasma membrane	34.71	39.25
Os06t0295000-01	Rice	cytosol, peroxisome, plasma membrane	17.15	38.25
Os06t0285900-00	Rice	nucleus	9.09	37.77
Os06t0294000-01	Rice	plasma membrane	35.02	36.93
Os06t0296100-00	Rice	plasma membrane	33.06	36.49
Os06t0292100-00	Rice	plasma membrane	34.81	36.24
Os06t0296900-00	Rice	plasma membrane	34.71	35.15
Os06t0294400-00	Rice	plasma membrane	22.83	34.37
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	21.49	34.04
Os11t0220500-00	Rice	plasma membrane	28.31	32.31
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	6.1	32.07
Os11t0220600-00	Rice	mitochondrion, plasma membrane	9.09	32.0
Os06t0291800-00	Rice	plasma membrane	35.74	30.59
Os06t0292400-00	Rice	plasma membrane	36.88	29.31
Os06t0286146-00	Rice	nucleus	8.06	28.26
Os06t0294200-01	Rice	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.2	EntrezGene:9269758	ProteinID:BAD54432.1	ProteinID:BAH93462.1	ProteinID:BAS97351.1	ncoils:Coil
ProteinID:EEE65561.1	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os06g0297400	EnsemblPlants:Os06t0297400-03	PFAM:PF13962	InterPro:PGG_dom
PANTHER:PTHR24177	PANTHER:PTHR24177:SF62	UniProt:Q5Z6I7	TMHMM:TMhelix	UniParc:UPI000044702D	RefSeq:XP_015643621.1
RefSeq:XP_015643622.1	RefSeq:XP_015643623.1	RefSeq:XP_015643624.1	SEG:seg	:	:

Description

Conserved hypothetical protein. (Os06t0297400-03)

Coordinates

chr6:+:11024309..11027884

Molecular Weight (calculated)

107051.0 Da

IEP (calculated)

9.774

GRAVY (calculated)

0.188

Length

968 amino acids

Sequence
(BLAST)

001: MSSVENPSNG RSNGHAPANA SAATANSAQA TQQGQTEQNP CDAGSEADLL WKLRKYLVLL AILAAAITFQ AGLGPPGGFW QQDQHGYHAG DVVLRYSYPR
101: RYLVFFYCNT TAFGASLIVL ILLLVKELSR DAIWLRSLQF AMVLGLLGLM GAYAAGSCRE VRTSVYIWAL LVGIFAYITL HVVFFRHLAP QWLCEIFYTI
201: RKHWKEILGS IHGDGGTDKT GETGDSEKTK RLEQNRSFLL VLATLAATVT YTAGLNPPGG FWPDDNKPSH LAGDPVLRDH YPRRFKAFLV CNATAFAGSL
301: VIIIMLLSNT AVDHVVKSNA LRLCVLVSLF GLMGAYAAGS CREVHTSIYV FALVGAVFLY LCIQWIEHMV PIPCIKSSME WVGKKKTHLL QKLGSFIMRG
401: TRNPTEESRS TPRAQNPVNN RRSGTSDTAK DDVEKLRTYL LLLGILAATV TYQAGLNPPG GFWQDNNGHT AGDPILEAIN PKRYKAFFYC NATAFVASLV
501: IIILLQSQLI TVGAMKRHIL QTAMALDLFG LMGAYAAGSS RKFSTSVYVF ILVLVVFTYF TLHVLLSMAL KTQLKTKIEH VPNLFHRFTR FCFRRTEGGS
601: DDGRSDSVEL QNEEKDLEKR RKFLMMLAIL AASITYQSGL SPPGGFWSDN DRHRAGDPVL HDEFPGRYRI FFYFNATAFM ASLAVILLLV NKRLCDKGLK
701: SYALRACVLV DLISLMGAFA AGSCRRVSTS IYVILVVAAV FAYVMIQILV LQVAEQKVDL LKKRRSGFES QQRSMTLTGP TGSTDKKRTE HKWRKDLMLI
801: GTLAVTVTYQ AGLLPPGGLW PSDQGNHYAG DPILKVTHPI RYKVFFYCNA TAFMASTVMV ILLLNNTISK YKRSLLAMKT AMVLDLLGLL GAYAAGSCRK
901: FKTSAYIFAL VIAVFIYIVI HVLLSFDEVA LLVKEKGKKW MPCLKMWDQI ETGASDQPSA TQSGAPPV

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.