Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plasma membrane 5
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028649_P001 | Maize | plasma membrane | 78.9 | 71.57 |
| KXG33698 | Sorghum | plasma membrane | 62.8 | 52.44 |
| Os06t0296700-01 | Rice | plasma membrane | 47.68 | 45.95 |
| EES07991 | Sorghum | plasma membrane | 53.29 | 45.9 |
| Os06t0295300-00 | Rice | golgi, mitochondrion, nucleus, plasma membrane | 33.9 | 45.5 |
| KXG27752 | Sorghum | plasma membrane | 52.56 | 44.8 |
| Os06t0296100-00 | Rice | plasma membrane | 41.46 | 38.77 |
| KXG35244 | Sorghum | plasma membrane | 34.39 | 38.21 |
| OQU85243 | Sorghum | plasma membrane | 38.9 | 37.57 |
| KXG19807 | Sorghum | plasma membrane | 9.51 | 36.79 |
| OQU84100 | Sorghum | plasma membrane | 41.22 | 36.62 |
| EES09243 | Sorghum | plasma membrane | 34.02 | 35.72 |
| OQU76269 | Sorghum | plasma membrane | 32.32 | 31.93 |
| OQU82858 | Sorghum | cytosol, peroxisome, plasma membrane | 33.78 | 31.48 |
| OQU83898 | Sorghum | plasma membrane | 35.24 | 30.33 |
| KXG19831 | Sorghum | plasma membrane | 33.54 | 30.02 |
| EER89616 | Sorghum | plasma membrane | 9.27 | 27.05 |
| KXG19808 | Sorghum | cytosol, peroxisome, plasma membrane | 9.39 | 26.01 |
| EER89615 | Sorghum | cytosol, peroxisome, plasma membrane | 8.05 | 24.44 |
| EER89631 | Sorghum | plasma membrane | 34.27 | 22.75 |
| OQU76264 | Sorghum | plasma membrane | 32.93 | 22.28 |
| OQU76268 | Sorghum | plasma membrane | 6.83 | 19.18 |
Protein Annotations
| EnsemblPlants:OQU92813 | EnsemblPlantsGene:SORBI_3001G418400 | Gene3D:1.20.1250.20 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PGG_dom | ncoils:Coil | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF51 | PFAM:PF13962 | ProteinID:OQU92813 |
| ProteinID:OQU92813.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B8B9E03 | UniProt:A0A1Z5SA63 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr1:-:69925187..69928168
Molecular Weight (calculated)
88419.9 Da
IEP (calculated)
7.253
GRAVY (calculated)
0.210
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: NATAFASSLV VIVLVLILSV LHDSGAGVTL LAPLLGVLRA VMVLDLLSLM GAYAAGAFRD TLTAVYSLVV LSAGVVGYLV AHLVLASRSS AEEDKYKRGK
101: SAPERLRKVL MLLATFAASV TYVAGLSAPG GFWDHAEDGH NPAMRSSREG PTTRASRRSS SQHHGKKLCF SQKVRSYEIY GFIAVTLISL LAAYAAGSSR
201: KIDTTIYVSA LVGAVGVCIL IQVVFVLLFQ QANSMSVMSV NRLKVRKLAV TTMAGTDGRT YCPLSLYMLC KLLELEYEQQ QQQTQSPQTG NGTGSGSDEH
301: EKQQNQALEK ARSLVLLLAT LATAITYQAG LNPPGGLWQS DGGGGGGIYK TGDPILLTTN PRRYKAFYYC NSIAFVASLV AVVLVRMKTL HHHNALEAAM
401: VLDLFGLIGA YAAGSCRDVS TSIYAMALAG LVLVYVVIHV ILLTLDHKDG GSASARGNGE TSGEEKNDAE LVEKRRKRLL LFAILAATIT YQAGLTPPGG
501: FLDQDDSRTG RHAGDPVLLN NYPRRYTAFF YCNSVSFMLS IALIILLVNP NLYRPAIRSN ALSVCTAAGL IGIMGGYAAG CTQHLKTSIY IFALAAVVLS
601: TVVLLAAVFL EEEEEEEEEE EEEEEEEEEE EEEASTGARR KEKRVHAKRK YLMLLGILVA SVTYQAGLAP PGGAWQSNDG THTAGDPVMH DYRRARYLAF
701: FYSNSTSFVA SVVVIVLLLP ESLQGWWLRV MNTTIVLDLL GLLIAYAAGS CRTWQTSVYV SALVLAVLAY FAIHVLLSSC VRRRKKTAPD SASQENGEGN
801: KAATTEVELQ LAETECAVRS
101: SAPERLRKVL MLLATFAASV TYVAGLSAPG GFWDHAEDGH NPAMRSSREG PTTRASRRSS SQHHGKKLCF SQKVRSYEIY GFIAVTLISL LAAYAAGSSR
201: KIDTTIYVSA LVGAVGVCIL IQVVFVLLFQ QANSMSVMSV NRLKVRKLAV TTMAGTDGRT YCPLSLYMLC KLLELEYEQQ QQQTQSPQTG NGTGSGSDEH
301: EKQQNQALEK ARSLVLLLAT LATAITYQAG LNPPGGLWQS DGGGGGGIYK TGDPILLTTN PRRYKAFYYC NSIAFVASLV AVVLVRMKTL HHHNALEAAM
401: VLDLFGLIGA YAAGSCRDVS TSIYAMALAG LVLVYVVIHV ILLTLDHKDG GSASARGNGE TSGEEKNDAE LVEKRRKRLL LFAILAATIT YQAGLTPPGG
501: FLDQDDSRTG RHAGDPVLLN NYPRRYTAFF YCNSVSFMLS IALIILLVNP NLYRPAIRSN ALSVCTAAGL IGIMGGYAAG CTQHLKTSIY IFALAAVVLS
601: TVVLLAAVFL EEEEEEEEEE EEEEEEEEEE EEEASTGARR KEKRVHAKRK YLMLLGILVA SVTYQAGLAP PGGAWQSNDG THTAGDPVMH DYRRARYLAF
701: FYSNSTSFVA SVVVIVLLLP ESLQGWWLRV MNTTIVLDLL GLLIAYAAGS CRTWQTSVYV SALVLAVLAY FAIHVLLSSC VRRRKKTAPD SASQENGEGN
801: KAATTEVELQ LAETECAVRS
001: MHPIFDAILQ NDLPAFLGLV EARESSLEER SEEQNTNNTV LHVAAKLGHR ELVAKIIELR PSLLSSRNAY GDTPLHLAAL LGDVNIVMQM LDTGLELYSA
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IPR3]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.