Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • peroxisome 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G387600.1 Wheat plasma membrane 46.48 49.61
KXG35244 Sorghum plasma membrane 35.78 46.21
Os11t0220500-00 Rice plasma membrane 40.29 45.28
Os11t0220600-00 Rice mitochondrion, plasma membrane 12.91 44.73
OQU85243 Sorghum plasma membrane 33.89 38.04
OQU84100 Sorghum plasma membrane 36.41 37.59
KXG19807 Sorghum plasma membrane 8.29 37.26
EES07991 Sorghum plasma membrane 36.31 36.34
TraesCS7D01G219300.1 Wheat extracellular, plasma membrane, plastid, vacuole 6.61 35.59
OQU92813 Sorghum endoplasmic reticulum, plasma membrane 30.33 35.24
KXG27752 Sorghum plasma membrane 35.57 35.24
KXG33698 Sorghum plasma membrane 35.15 34.11
EES09243 Sorghum plasma membrane 27.39 33.42
OQU76269 Sorghum plasma membrane 28.86 33.13
KXG19831 Sorghum plasma membrane 31.16 32.42
OQU82858 Sorghum cytosol, peroxisome, plasma membrane 29.91 32.39
OQU76268 Sorghum plasma membrane 9.02 29.45
KXG19808 Sorghum cytosol, peroxisome, plasma membrane 8.29 26.69
TraesCS6A01G395500.1 Wheat cytosol 3.88 24.67
EER89616 Sorghum plasma membrane 7.24 24.56
EER89615 Sorghum cytosol, peroxisome, plasma membrane 6.93 24.44
EER89631 Sorghum plasma membrane 30.85 23.81
OQU76264 Sorghum plasma membrane 29.7 23.35
Protein Annotations
EnsemblPlants:OQU83898EnsemblPlantsGene:SORBI_3005G196500GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:MFS_trans_sf
InterPro:PGG_domncoils:CoilPANTHER:PTHR24177PANTHER:PTHR24177:SF45PFAM:PF13962ProteinID:OQU83898
ProteinID:OQU83898.1SEG:segSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000B8BADF3UniProt:A0A1Z5RJJ3
MapMan:35.2:::::
Description
hypothetical protein
Coordinates
chr5:-:68165731..68171949
Molecular Weight (calculated)
102977.0 Da
IEP (calculated)
9.324
GRAVY (calculated)
0.083
Length
953 amino acids
Sequence
(BLAST)
001: MQAPNNARMA SRSQSQVQYK YLQLLFGIHK DHDYNTKTAT EYQVKKYLLL LATLVATVTY AAGLNVPGGS WLEDDLPEGH LAGDSILRDT SFRRYIVFYY
101: FNAISFAASL MVGLLLLIVH QDGQSWGNWA LLQLVRAVML VDLLGLLGAY AVGSSHDRFT TVCGATVLAS GVVAYAAVAL VTKWFVTTAA AAADDDDQNK
201: QESLQEAKAK GRKKEHEILL VLAIFAATIG YVAGLNPPGG FWRSSDDSEQ AGHHHHHNAG EPVLQGLHRT RYRVFFYFNT TGFVASLLAI MLVVSFDKMK
301: YEEQDRIPTG VRKLALFGPN VTALLGLAGA YAAGSCRDSR HTIYIVLVAA SISLLLFVAQ MIAKRMNSNS RANLPTKSES TSRSGETKTL HSRSGSTMNS
401: SDETKALPYK NWAKTREDLQ LLAILVATVA YTAGVDPPGG VWAETGHGHR VGDPILLTTH PVRYKVFFYC NSAALVASLA IMVMLQSDRL VRKHALEAVM
501: ILDLFALIGA FAAGGARDTS TSVYTVALAG AVLIYVVIHI VFFTLDTPAP PPPAEGGENH AVADEDPSTT PAPAAQKGEK KNVDEQRQEE KQLQKRRDVL
601: LLLAILAATL TYQAGLTPPG GTWEEDGGGD SSSSSGGGHR AGFPVLLDKF PLRYKTFYYC NAASFMASVA LIVLLLNQNL YKPGIRCYAL YVCMVAGMLG
701: LMGAYSAGSS LHLRTSIVVL VFASLLTVAA FAVAIYVKKR NDKKARIRQG DDDDDGGGQK RPKIKAKTNK AKRKDDGDAM TYLMLVGILG ASVTYLTGLK
801: PPGGTWRDDG DGHSAGSPVL YDTGKHRYNA FFYNNSASFM ISINIIAWLL VRMIWGPRRK DDDEAATTAT TTTAKTTASS VVVHLSPLYG AVVLDLVALL
901: GAYAAGSARK WGTSTKVVVM LVPVLLVVWL VLFCCDKQTK DKPAATSQPA VTS
Best Arabidopsis Sequence Match ( AT5G54700.2 )
(BLAST)
001: MLEFGEKSTP LDDISEVEND LKLAELVNND GLTPLHCAAV SNSIKILKVF SHKTPSSFDI LTQPHNETVF HLAVRHKNLK AFKFMAQKVH LEKLLYKPDK
101: YGNTVLHTAA SLGSTSLAEY IINETKIHTK AKNIQGLAAV DLLDKDDANF PSIALKFGGE SHKEESVMHS EALQNARNTI TVVAILIASV TFAVGMNPPG
201: GIYQESTSSK GKSVAAKTVA FKIFYVSNSI ALFTSLWIVI LLVSIIPFKP KSLKNVLVIT HKMMSVSVAA LATSYVAVGW IILPHFEGTK WLLYTTLGIS
301: IVMRGGMYVF LWFKLAKHIL RKIDTERDPD EEAATGKGYV MYWKS
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4K1T9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.