Factsheet for HORVU2Hr1G082080.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi
MultiLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G071800.1	Wheat	peroxisome	64.93	44.84
GSMUA_Achr10P...	Banana	golgi, peroxisome, vacuole	49.31	41.4
Zm00001d010954_P001	Maize	plasma membrane	56.94	41.1
OQU77333	Sorghum	peroxisome	59.72	40.95
Os05t0128400-01	Rice	plasma membrane	59.38	40.91
HORVU1Hr1G015500.6	Barley	plastid	65.97	40.17
HORVU4Hr1G082000.3	Barley	golgi, mitochondrion, plasma membrane	59.72	38.91
Zm00001d035447_P001	Maize	golgi, peroxisome, plasma membrane	56.94	38.14
PGSC0003DMT400078996	Potato	plasma membrane	46.53	37.96
KRH47778	Soybean	peroxisome	52.43	37.01
CDY38099	Canola	golgi, peroxisome, plasma membrane	46.88	36.89
GSMUA_Achr7P15550_001	Banana	plasma membrane	50.0	36.83
Bra000432.1-P	Field mustard	golgi, peroxisome, plasma membrane	48.61	36.36
Bra004506.1-P	Field mustard	golgi, peroxisome, plasma membrane	46.53	35.54
Solyc07g007060.1.1	Tomato	plasma membrane	46.18	35.37
CDY09860	Canola	golgi, plasma membrane, vacuole	40.62	34.31
AT3G58810.1	Thale cress	plasma membrane	51.04	34.03
KRH06350	Soybean	peroxisome	49.31	33.65
PGSC0003DMT400078898	Potato	golgi, peroxisome, plasma membrane	47.57	33.01
VIT_02s0025g02900.t01	Wine grape	mitochondrion, plasma membrane	52.43	31.72
HORVU2Hr1G025050.1	Barley	endoplasmic reticulum, plasma membrane	17.01	10.38
Bra007643.1-P	Field mustard	cytosol	1.74	4.9
HORVU2Hr1G082090.3	Barley	cytosol	3.12	4.09

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	UniProt:A0A287IMW9	InterPro:Cation_efflux	InterPro:Cation_efflux_TMD_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	EnsemblPlantsGene:HORVU2Hr1G082080
EnsemblPlants:HORVU2Hr1G082080.4	InterPro:IPR027469	PFAM:PF01545	PANTHER:PTHR11562	PANTHER:PTHR11562:SF80	SUPFAM:SSF161111
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000B4822D5	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:596305377..596306602

Molecular Weight (calculated)

27320.6 Da

IEP (calculated)

6.605

GRAVY (calculated)

0.101

Length

288 amino acids

Sequence
(BLAST)

001: PLWIMDSHNS SQPHVPEVIM DMSSASGAAG NKICRGAACD FSDASNTSKD LKERSASMKK LLIAVILCVI FMAVEVVGGI KANSLAILTD AAHLLSDVAA
101: FAISLFSLWA AGWEATPQQS YGFFRIEILG ALVSIQLIWL LAGILVYEAI MRLINESGEV QGSLMFAVSA FGLFVNIIMA VLLGHDHGHG GHGHSHGHSH
201: DHDHGDSEDH GDHEQGHVHH HEHSHGTTIT VTTNHHSHSS TXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXKSCLK SALKPHYI

Best Arabidopsis Sequence Match ( AT2G46800.1 )
(BLAST)

001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER

Arabidopsis Description

MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.