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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d010954_P001 Maize plasma membrane 83.33 87.72
Os05t0128400-01 Rice plasma membrane 80.48 80.86
TraesCS1A01G071800.1 Wheat peroxisome 79.76 80.34
GSMUA_Achr10P... Banana golgi, peroxisome, vacuole 65.0 79.59
TraesCS1D01G074400.1 Wheat peroxisome 78.81 78.62
TraesCS1B01G090400.2 Wheat plasma membrane 79.52 77.49
TraesCS4B01G327000.1 Wheat plastid 72.62 76.44
TraesCS4D01G323700.1 Wheat golgi, peroxisome, plasma membrane 73.81 76.35
TraesCS5A01G499000.1 Wheat plasma membrane 70.48 76.09
Zm00001d035447_P001 Maize golgi, peroxisome, plasma membrane 75.95 74.19
Solyc07g007060.1.1 Tomato plasma membrane 65.95 73.67
PGSC0003DMT400078996 Potato plasma membrane 61.43 73.09
Bra004506.1-P Field mustard golgi, peroxisome, plasma membrane 63.57 70.82
Bra000432.1-P Field mustard golgi, peroxisome, plasma membrane 64.52 70.39
HORVU1Hr1G015500.6 Barley plastid 78.1 69.34
HORVU4Hr1G082000.3 Barley golgi, mitochondrion, plasma membrane 72.62 69.0
CDY38099 Canola golgi, peroxisome, plasma membrane 59.52 68.31
PGSC0003DMT400078898 Potato golgi, peroxisome, plasma membrane 67.38 68.19
HORVU2Hr1G082090.3 Barley cytosol 35.71 68.18
KRH47778 Soybean peroxisome 65.48 67.4
KRH06350 Soybean peroxisome 65.48 65.17
GSMUA_Achr7P15550_001 Banana plasma membrane 59.76 64.19
AT3G58810.1 Thale cress plasma membrane 62.62 60.88
HORVU2Hr1G082080.4 Barley golgi 40.95 59.72
CDY09860 Canola golgi, plasma membrane, vacuole 48.33 59.53
VIT_02s0025g02900.t01 Wine grape mitochondrion, plasma membrane 66.19 58.4
Bra007643.1-P Field mustard cytosol 10.95 45.1
EES15000 Sorghum plastid 23.81 12.55
Protein Annotations
Gene3D:1.20.1510.10MapMan:24.2.9.2.3UniProt:A0A1Z5R0M5InterPro:Cation_effluxInterPro:Cation_efflux_CTD_sfInterPro:Cation_efflux_TMD_sf
GO:GO:0000325GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0006812GO:GO:0006950GO:GO:0008150
GO:GO:0008324GO:GO:0009705GO:GO:0010043GO:GO:0010312GO:GO:0016020GO:GO:0016021
GO:GO:0055085GO:GO:0098655InterPro:IPR027469InterPro:IPR036837EnsemblPlants:OQU77333ProteinID:OQU77333
ProteinID:OQU77333.1ProteinID:OQU77334.1PFAM:PF01545PANTHER:PTHR11562PANTHER:PTHR11562:SF80EnsemblPlantsGene:SORBI_3009G029500
SUPFAM:SSF160240SUPFAM:SSF161111TIGRFAMs:TIGR01297TMHMM:TMhelixUniParc:UPI000B4256A0SEG:seg
Description
hypothetical protein
Coordinates
chr9:-:2629468..2635480
Molecular Weight (calculated)
45991.1 Da
IEP (calculated)
6.481
GRAVY (calculated)
0.076
Length
420 amino acids
Sequence
(BLAST)
001: MMESNNPSHS QIAEVKMDIS ASASGAAGYK FCKGAACDFS DSSNSSKDAK ERSASMRKLI IAVILCIIFM TVEVVGGIKA NSLAILTDAA HLLSDVAAFA
101: ISLFSLWAAG WEATPQQSYG FFRIEILGAL VSIQLIWLLA GILVYEAIVR LINESGEVQG SLMFAVSAFG LLVNIVMAVL LGHDHGHGHG HSHGHSHDHG
201: HGDSDDDHSH HEEQEQGHVH HHEHGHGSSI TVTTHHHHHH HSGTGQHHDV EEPLIKHEAD CEGTQSAAKA AKKPRRNINV HSAYLHVLGD SIQSIGVMIG
301: GAIIWYKPEW KIIDLICTLI FSVIVLFTTI RMLRNILEVL MESTPREIDA TRLQRGLCEM EGVVAVHELH IWAITVGKVL LACHVTIARE ADADQILDKV
401: IGYIKTEYNI SHVTIQVERE
Best Arabidopsis Sequence Match ( AT2G46800.2 )
(BLAST)
001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
Arabidopsis Description
MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.