Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G090400.2 | Wheat | plasma membrane | 98.57 | 96.29 |
| TraesCS1A01G071800.1 | Wheat | peroxisome | 88.84 | 89.69 |
| HORVU1Hr1G015500.6 | Barley | plastid | 97.62 | 86.89 |
| Os05t0128400-01 | Rice | plasma membrane | 81.71 | 82.3 |
| TraesCS4D01G323700.1 | Wheat | golgi, peroxisome, plasma membrane | 77.43 | 80.3 |
| OQU77333 | Sorghum | peroxisome | 78.62 | 78.81 |
| Zm00001d010954_P001 | Maize | plasma membrane | 74.35 | 78.45 |
| GSMUA_Achr10P... | Banana | golgi, peroxisome, vacuole | 62.0 | 76.09 |
| PGSC0003DMT400078996 | Potato | plasma membrane | 60.81 | 72.52 |
| Solyc07g007060.1.1 | Tomato | plasma membrane | 64.61 | 72.34 |
| Zm00001d035447_P001 | Maize | golgi, peroxisome, plasma membrane | 70.55 | 69.07 |
| Bra000432.1-P | Field mustard | golgi, peroxisome, plasma membrane | 62.0 | 67.79 |
| Bra004506.1-P | Field mustard | golgi, peroxisome, plasma membrane | 60.57 | 67.64 |
| PGSC0003DMT400078898 | Potato | golgi, peroxisome, plasma membrane | 65.56 | 66.51 |
| KRH47778 | Soybean | peroxisome | 62.95 | 64.95 |
| CDY38099 | Canola | golgi, peroxisome, plasma membrane | 56.29 | 64.75 |
| KRH06350 | Soybean | peroxisome | 64.37 | 64.22 |
| GSMUA_Achr7P15550_001 | Banana | plasma membrane | 57.48 | 61.89 |
| AT3G58810.1 | Thale cress | plasma membrane | 61.52 | 59.95 |
| CDY09860 | Canola | golgi, plasma membrane, vacuole | 48.22 | 59.53 |
| VIT_02s0025g02900.t01 | Wine grape | mitochondrion, plasma membrane | 66.27 | 58.61 |
| Bra007643.1-P | Field mustard | cytosol | 10.93 | 45.1 |
| TraesCS2D01G144900.1 | Wheat | plastid | 24.94 | 13.41 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.3 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 | InterPro:IPR036837 | PFAM:PF01545 |
| PANTHER:PTHR11562 | PANTHER:PTHR11562:SF80 | SUPFAM:SSF160240 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS1D01G074400 | EnsemblPlants:TraesCS1D01G074400.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:-:55669084..55672152
Molecular Weight (calculated)
45791.8 Da
IEP (calculated)
6.457
GRAVY (calculated)
0.037
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHNSTSPH VPEVTMDISS ASGAAGNKAC RGAACDFSDA SNTSKDSKER SASMKKLLIA VILCVIFMAV EVVGGIKANS LAILTDAAHL LSDVAAFAIS
101: LFSLWAAGWE ATPQQSYGFF RIEILGALVS IQLIWLLAGI LVYEAIMRLI NESGEVQGSL MFAVSAFGLF VNIIMAVLLG HDHGHGGHGH SHGHGHGHSH
201: DHDHGNSEDD HSHHGDHEQG HVHHHEHSHG TSITVTTNHH SHSSTGQHQD VEQPLLKHDG DCESAQPGAK PAKKPRRNIN VHSAYLHVIG DSIQSIGVMI
301: GGALIWYKPE WKIIDLICTL IFSVIVLFTT IKMIRNILEV LMESTPREID ATRLESGLRE MEGVIAVHEL HIWAITVGKV LLACHVTITQ DADADKMLDK
401: VIGYIKAEYN ISHVTIQIER E
101: LFSLWAAGWE ATPQQSYGFF RIEILGALVS IQLIWLLAGI LVYEAIMRLI NESGEVQGSL MFAVSAFGLF VNIIMAVLLG HDHGHGGHGH SHGHGHGHSH
201: DHDHGNSEDD HSHHGDHEQG HVHHHEHSHG TSITVTTNHH SHSSTGQHQD VEQPLLKHDG DCESAQPGAK PAKKPRRNIN VHSAYLHVIG DSIQSIGVMI
301: GGALIWYKPE WKIIDLICTL IFSVIVLFTT IKMIRNILEV LMESTPREID ATRLESGLRE MEGVIAVHEL HIWAITVGKV LLACHVTITQ DADADKMLDK
401: VIGYIKAEYN ISHVTIQIER E
001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
Arabidopsis Description
MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.