Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g007060.1.1 | Tomato | plasma membrane | 83.37 | 92.02 |
| PGSC0003DMT400078996 | Potato | plasma membrane | 71.57 | 84.14 |
| GSMUA_Achr10P... | Banana | golgi, peroxisome, vacuole | 61.45 | 74.34 |
| Bra000432.1-P | Field mustard | golgi, peroxisome, plasma membrane | 66.27 | 71.43 |
| Bra004506.1-P | Field mustard | golgi, peroxisome, plasma membrane | 64.1 | 70.56 |
| KRH06350 | Soybean | peroxisome | 68.92 | 67.77 |
| TraesCS4D01G323700.1 | Wheat | golgi, peroxisome, plasma membrane | 66.02 | 67.49 |
| Zm00001d010954_P001 | Maize | plasma membrane | 64.82 | 67.42 |
| OQU77333 | Sorghum | peroxisome | 68.19 | 67.38 |
| KRH47778 | Soybean | peroxisome | 66.02 | 67.16 |
| TraesCS5A01G499000.1 | Wheat | plasma membrane | 62.89 | 67.1 |
| Os05t0128400-01 | Rice | plasma membrane | 67.47 | 66.99 |
| TraesCS4B01G327000.1 | Wheat | plastid | 64.34 | 66.92 |
| CDY38099 | Canola | golgi, peroxisome, plasma membrane | 58.8 | 66.67 |
| TraesCS1D01G074400.1 | Wheat | peroxisome | 66.51 | 65.56 |
| TraesCS1A01G071800.1 | Wheat | peroxisome | 65.3 | 64.99 |
| GSMUA_Achr7P22430_001 | Banana | plasma membrane | 56.63 | 64.74 |
| TraesCS1B01G090400.2 | Wheat | plasma membrane | 67.23 | 64.73 |
| VIT_02s0025g02900.t01 | Wine grape | mitochondrion, plasma membrane | 72.53 | 63.24 |
| GSMUA_Achr7P15550_001 | Banana | plasma membrane | 58.31 | 61.89 |
| Zm00001d035447_P001 | Maize | golgi, peroxisome, plasma membrane | 63.86 | 61.63 |
| AT3G58810.1 | Thale cress | plasma membrane | 63.61 | 61.11 |
| CDY09860 | Canola | golgi, plasma membrane, vacuole | 49.64 | 60.41 |
| HORVU4Hr1G082000.3 | Barley | golgi, mitochondrion, plasma membrane | 64.1 | 60.18 |
| HORVU2Hr1G082090.3 | Barley | cytosol | 31.08 | 58.64 |
| HORVU1Hr1G015500.6 | Barley | plastid | 66.27 | 58.14 |
| Bra007643.1-P | Field mustard | cytosol | 12.29 | 50.0 |
| HORVU2Hr1G082080.4 | Barley | golgi | 33.01 | 47.57 |
| PGSC0003DMT400077991 | Potato | plasma membrane | 38.55 | 42.11 |
| PGSC0003DMT400017877 | Potato | plasma membrane | 20.48 | 9.52 |
Protein Annotations
| Gene3D:1.20.1510.10 | EntrezGene:102592960 | MapMan:24.2.9.2.3 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 | InterPro:IPR027469 |
| InterPro:IPR036837 | UniProt:M1D0W9 | PFAM:PF01545 | EnsemblPlantsGene:PGSC0003DMG400030701 | PGSC:PGSC0003DMG400030701 | EnsemblPlants:PGSC0003DMT400078898 |
| PANTHER:PTHR11562 | PANTHER:PTHR11562:SF80 | SUPFAM:SSF160240 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix |
| UniParc:UPI0002955340 | RefSeq:XP_006359535.1 | RefSeq:XP_006359536.1 | SEG:seg | : | : |
Description
NGMTP1 [Source:PGSC_GENE;Acc:PGSC0003DMG400030701]
Coordinates
chr7:-:2971318..2973634
Molecular Weight (calculated)
45975.4 Da
IEP (calculated)
6.528
GRAVY (calculated)
0.005
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTQNPEHGR VIEVSVDITG QEKGTKICGS APCGFSDVNT MSKDAQERSA SMRKLCIAVV LCIIFYGCRG LSEVLKANSL AILTDAAHLL SDVAAFAISL
101: FSLWASGWEA NPRQSYGFFR IEILGALVSI QMIWLLAGIL VYEAIARLIH DTGEVKGFLM FVVSAFGLGV NLIMALLLGH DHGHGHGHGH GHEHSHSHEE
201: HAHSHSDHEH GHGEHTHIHG ISVSRHHHHN EGPSNRDQHI HAHDTDHTVP LLKDSCEGEG VSEGEKKKKQ RNINVQGAYL HVLGDSIQSI GVMIGGAIIW
301: YKPEWKIIDL ICTLIFSVIV LATTIRMIRS ILEVLMESTP REIDATRLEK GLCEMEEVVA IHELHIWAIT VGKVLLACHV KIKPDADADM VLDKVVDYIR
401: REYNISHVTI QIERE
101: FSLWASGWEA NPRQSYGFFR IEILGALVSI QMIWLLAGIL VYEAIARLIH DTGEVKGFLM FVVSAFGLGV NLIMALLLGH DHGHGHGHGH GHEHSHSHEE
201: HAHSHSDHEH GHGEHTHIHG ISVSRHHHHN EGPSNRDQHI HAHDTDHTVP LLKDSCEGEG VSEGEKKKKQ RNINVQGAYL HVLGDSIQSI GVMIGGAIIW
301: YKPEWKIIDL ICTLIFSVIV LATTIRMIRS ILEVLMESTP REIDATRLEK GLCEMEEVVA IHELHIWAIT VGKVLLACHV KIKPDADADM VLDKVVDYIR
401: REYNISHVTI QIERE
001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
Arabidopsis Description
MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.