Factsheet for VIT_02s0025g02900.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007060.1.1	Tomato	plasma membrane	62.6	79.26
PGSC0003DMT400078996	Potato	plasma membrane	57.98	78.19
GSMUA_Achr10P...	Banana	golgi, peroxisome, vacuole	54.62	75.8
PGSC0003DMT400078898	Potato	golgi, peroxisome, plasma membrane	63.24	72.53
VIT_15s0048g02520.t01	Wine grape	endoplasmic reticulum, golgi, peroxisome	62.18	70.81
Zm00001d010954_P001	Maize	plasma membrane	56.72	67.67
GSMUA_Achr7P22430_001	Banana	plasma membrane	51.47	67.49
TraesCS5A01G499000.1	Wheat	plasma membrane	55.04	67.35
CDY38099	Canola	golgi, peroxisome, plasma membrane	51.68	67.21
Os05t0128400-01	Rice	plasma membrane	58.61	66.75
TraesCS4B01G327000.1	Wheat	plastid	55.88	66.67
TraesCS4D01G323700.1	Wheat	golgi, peroxisome, plasma membrane	56.72	66.5
TraesCS1D01G074400.1	Wheat	peroxisome	58.61	66.27
OQU77333	Sorghum	peroxisome	58.4	66.19
TraesCS1B01G090400.2	Wheat	plasma membrane	59.24	65.43
TraesCS1A01G071800.1	Wheat	peroxisome	56.72	64.75
Zm00001d035447_P001	Maize	golgi, peroxisome, plasma membrane	56.93	63.02
AT3G58810.1	Thale cress	plasma membrane	57.14	62.96
GSMUA_Achr7P15550_001	Banana	plasma membrane	51.26	62.4
CDY09860	Canola	golgi, plasma membrane, vacuole	44.33	61.88
HORVU4Hr1G082000.3	Barley	golgi, mitochondrion, plasma membrane	56.51	60.86
HORVU1Hr1G015500.6	Barley	plastid	58.4	58.77
HORVU2Hr1G082090.3	Barley	cytosol	26.89	58.18
HORVU2Hr1G082080.4	Barley	golgi	31.72	52.43
VIT_06s0004g05540.t01	Wine grape	plasma membrane	38.03	43.83
VIT_14s0066g02030.t01	Wine grape	endoplasmic reticulum, golgi, nucleus	18.49	7.99

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:100241107	wikigene:100241107	MapMan:24.2.9.2.3	EMBL:AM425674	ProteinID:CAN64515
ProteinID:CAN64515.1	ProteinID:CCB58317	ProteinID:CCB58317.1	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf
UniProt:F6HU94	EMBL:FN596251	GO:GO:0000325	GO:GO:0003674	GO:GO:0005215	GO:GO:0005385
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810
GO:GO:0006812	GO:GO:0006950	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705	GO:GO:0009987
GO:GO:0010043	GO:GO:0010312	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085
GO:GO:0061088	GO:GO:0071577	GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	EntrezGene:LOC100241107
wikigene:LOC100241107	PFAM:PF01545	PANTHER:PTHR11562	PANTHER:PTHR11562:SF80	SUPFAM:SSF160240	SUPFAM:SSF161111
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0002109E8B	ArrayExpress:VIT_02s0025g02900	EnsemblPlantsGene:VIT_02s0025g02900	EnsemblPlants:VIT_02s0025g02900.t01
RefSeq:XP_002278303	RefSeq:XP_002278303.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:2485471..2489632

Molecular Weight (calculated)

52900.3 Da

IEP (calculated)

6.907

GRAVY (calculated)

0.057

Length

476 amino acids

Sequence
(BLAST)

001: MSIVRRKKIK IKNLNPQLST HFLLKALRPA SRGYRYAIIQ SLFFLQVGIL YSEHDCLKME VQNLEHGNII EIHGDVPTVE TSLSRSKICE GATCGFSDAK
101: TISKDDKERA ASMKKLLIAV VLCIIFMSVE VAGGIKANSL AILTDAAHLL SDVAAFAISL FSLWAAGWEA TPRQSYGFFR IEILGALVSI QMIWLLAGIL
201: VYEAVARIIH DTGEVQGFLM FIVAAFGLVV NVVMALLLGH DHAHGHGGHD HGHGGHDHGH GGHDHGHSNE DHNNRHRYGI KITTHDHHHE ENFQHSDDHH
301: HAHEAGLMAP LLEGSSEGEH KVKGGVKQKT QRNINVQGAY LHVLGDSIQS IGVMIGGAII WYKPEWKIID LICTLIFSAI VLGTTIRMLR NILEVLMEST
401: PREIDATRLE KGLCEMDEVV AIHELHIWAI TVGKVLLACH VKIKPEADAD MVLDKVIDYI RREYNISHVT IQIERE

Best Arabidopsis Sequence Match ( AT3G58810.1 )
(BLAST)

001: MVTPKLHLDL SLTKKVSYLF VSRQTLYRLS SSCLASLFLS FDAFLIARSC FFFQMKDHIH EHDHMVQICG EVSSGETSLV GIKKTCGEAP CGFSDAKTSS
101: IEAQERAASM RKLLIAVLLC AIFIVVEVVG GIKANSLAIL TDAAHLLSDV AAFAISLFSL WASGWKANPQ QSYGFFRIEI LGALVSIQMI WLLAGILVYE
201: AIVRLNNGSG EVEGSLMFAV SAVGLLVNIA MAILLGHDHG HGHGHSHDNG HGHSHDHGHG IAATEHHHDS GHDESQLSDV LIEQKKQRNV NIQGAYLHVL
301: GDSIQSVGVM IGGAIIWYKP EWKILDLICT LVFSVIVLGT TIGMLRNILE VLMESTPREI DPTMLEKGVC EIEEVVAVHE LHIWAITVGK LLLACHVKIR
401: PEAEADMVLD KIIDYIKREH NISHVTIQIE RQ

Arabidopsis Description

MTPA2Metal tolerance protein A2 [Source:UniProtKB/TrEMBL;Acc:Q3EAH9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.