Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41560 | Canola | plasma membrane | 57.77 | 59.88 |
| CDY38099 | Canola | golgi, peroxisome, plasma membrane | 63.64 | 59.29 |
| PGSC0003DMT400078996 | Potato | plasma membrane | 61.0 | 58.92 |
| Solyc07g007060.1.1 | Tomato | plasma membrane | 60.7 | 55.05 |
| CDY68480 | Canola | plasma membrane | 24.34 | 54.97 |
| GSMUA_Achr10P... | Banana | golgi, peroxisome, vacuole | 55.13 | 54.81 |
| CDX80048 | Canola | golgi, peroxisome, plasma membrane | 60.12 | 54.52 |
| CDY55925 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 42.23 | 54.14 |
| CDX83353 | Canola | golgi, peroxisome, plasma membrane | 60.7 | 53.77 |
| TraesCS5A01G499000.1 | Wheat | plasma membrane | 60.12 | 52.7 |
| TraesCS4B01G327000.1 | Wheat | plastid | 61.29 | 52.38 |
| TraesCS4D01G323700.1 | Wheat | golgi, peroxisome, plasma membrane | 61.0 | 51.23 |
| Zm00001d010954_P001 | Maize | plasma membrane | 59.53 | 50.88 |
| PGSC0003DMT400078898 | Potato | golgi, peroxisome, plasma membrane | 60.41 | 49.64 |
| TraesCS1A01G071800.1 | Wheat | peroxisome | 60.41 | 49.4 |
| Os05t0128400-01 | Rice | plasma membrane | 59.82 | 48.8 |
| OQU77333 | Sorghum | peroxisome | 59.53 | 48.33 |
| TraesCS1D01G074400.1 | Wheat | peroxisome | 59.53 | 48.22 |
| GSMUA_Achr7P22430_001 | Banana | plasma membrane | 51.03 | 47.93 |
| Zm00001d035447_P001 | Maize | golgi, peroxisome, plasma membrane | 59.53 | 47.21 |
| TraesCS1B01G090400.2 | Wheat | plasma membrane | 59.53 | 47.1 |
| GSMUA_Achr7P15550_001 | Banana | plasma membrane | 51.91 | 45.27 |
| HORVU4Hr1G082000.3 | Barley | golgi, mitochondrion, plasma membrane | 58.36 | 45.02 |
| CDY48014 | Canola | plasma membrane | 62.17 | 44.35 |
| VIT_02s0025g02900.t01 | Wine grape | mitochondrion, plasma membrane | 61.88 | 44.33 |
| HORVU1Hr1G015500.6 | Barley | plastid | 59.24 | 42.71 |
| HORVU2Hr1G082090.3 | Barley | cytosol | 26.39 | 40.91 |
| HORVU2Hr1G082080.4 | Barley | golgi | 34.31 | 40.62 |
| CDY51370 | Canola | cytosol, golgi, plasma membrane | 28.15 | 39.51 |
| CDY68481 | Canola | cytosol | 6.74 | 37.1 |
| CDX97888 | Canola | plasma membrane | 28.45 | 36.6 |
| CDY40170 | Canola | extracellular, plasma membrane | 11.44 | 30.95 |
| CDY11385 | Canola | cytosol | 7.33 | 24.51 |
| CDY30290 | Canola | plasma membrane, plastid | 19.65 | 8.85 |
| CDY30837 | Canola | plasma membrane, plastid | 19.94 | 8.84 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.3 | GO:A0A078F5W2 | UniProt:A0A078F5W2 | EnsemblPlants:CDY09860 | ProteinID:CDY09860 |
| ProteinID:CDY09860.1 | InterPro:Cation_efflux | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | GO:GO:0098655 | EnsemblPlantsGene:GSBRNA2T00031603001 | InterPro:IPR027469 | PFAM:PF01545 | PANTHER:PTHR11562 |
| PANTHER:PTHR11562:SF80 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI0004EE1570 | SEG:seg |
Description
BnaC09g43010DBnaC09g43010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5W2]
Coordinates
chrLK031999:+:598399..599514
Molecular Weight (calculated)
37501.4 Da
IEP (calculated)
6.091
GRAVY (calculated)
0.134
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVQRQLDYE ESHHDHVVQI SSVEASLVKA AKKTCGETPC LFFDANSLSR EAGDRKAAMK KLLVAVALCS LFIVVEVIGG IKANSLAILT DAAHLFVDVT
101: AFGISLFSLW ASGWEATPRK SYGFFRIEVL GALVSVQMIW LLAGFLVYEA IARLHNGGGE VQGSLMFGIS AFGLMVNLAM AFLLGHSHGG HSHGHGHDHE
201: NQHDHHHHPQ LSEALLEENG TRSEKKRNLN LEGAYLHALG DLIQSVGVML GGAVIWYKPE WKIIDLICTL LFSVIVLGTT LGMSRNILDV LMESTPQEID
301: ADKLEKGVRP EADGDMVLDK VIDYIKTEYN ISHVTIQIER Q
101: AFGISLFSLW ASGWEATPRK SYGFFRIEVL GALVSVQMIW LLAGFLVYEA IARLHNGGGE VQGSLMFGIS AFGLMVNLAM AFLLGHSHGG HSHGHGHDHE
201: NQHDHHHHPQ LSEALLEENG TRSEKKRNLN LEGAYLHALG DLIQSVGVML GGAVIWYKPE WKIIDLICTL LFSVIVLGTT LGMSRNILDV LMESTPQEID
301: ADKLEKGVRP EADGDMVLDK VIDYIKTEYN ISHVTIQIER Q
001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
Arabidopsis Description
MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.