Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • nucleus 1
  • cytosol 3
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007643.1-P Field mustard cytosol 100.0 100.0
CDY68481 Canola cytosol 53.92 88.71
CDY55925 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 55.88 21.43
CDY41560 Canola plasma membrane 52.94 16.41
CDX80048 Canola golgi, peroxisome, plasma membrane 53.92 14.63
CDX83353 Canola golgi, peroxisome, plasma membrane 52.94 14.03
CDY40170 Canola extracellular, plasma membrane 15.69 12.7
KRH47778 Soybean peroxisome 48.04 12.01
KRH06350 Soybean peroxisome 48.04 11.61
CDY48014 Canola plasma membrane 53.92 11.51
VIT_15s0048g02520.t01 Wine grape endoplasmic reticulum, golgi, peroxisome 47.06 11.48
CDY38099 Canola golgi, peroxisome, plasma membrane 41.18 11.48
CDY51370 Canola cytosol, golgi, plasma membrane 25.49 10.7
CDX97888 Canola plasma membrane 23.53 9.06
CDY09860 Canola golgi, plasma membrane, vacuole 24.51 7.33
CDY30290 Canola plasma membrane, plastid 21.57 2.91
CDY30837 Canola plasma membrane, plastid 19.61 2.6
CDY68480 Canola plasma membrane 1.96 1.32
Protein Annotations
EnsemblPlants:CDY11385EnsemblPlantsGene:GSBRNA2T00049444001GO:A0A078FAF6InterPro:Cation_efflux_CTD_sfInterPro:IPR036837PANTHER:PTHR11562
PANTHER:PTHR11562:SF80ProteinID:CDY11385ProteinID:CDY11385.1SUPFAM:SSF160240UniParc:UPI0002542A49UniProt:A0A078FAF6
MapMan:24.2.9.2.3:::::
Description
BnaA09g39510DBnaA09g39510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAF6]
Coordinates
chrLK032011:+:172249..173344
Molecular Weight (calculated)
11608.1 Da
IEP (calculated)
8.085
GRAVY (calculated)
-0.144
Length
102 amino acids
Sequence
(BLAST)
001: MDSTRNKVCG ETSCVFSTSP SDAKERSASM RKLSIVVKGL LETEEVVSVH ELHIWAITVG KVLFSCHVKI KQESDDAMVL NKVIDYIRRE YRISHVTIQI
101: ER
Best Arabidopsis Sequence Match ( AT3G61940.1 )
(BLAST)
001: MDSRRSKVCG ETACGFSTSS SDAKKRAASM RKLCFVVVLC LLFMSIEVVC GIKANSLAIL ADAAHLLTDV GAFAISMLSL WASSWEANPR QSYGFFRIEI
101: LGTLVSIQLI WLLTGILVYE AVTRLVQETN DDVDGFFMVL VAAFGLVVNI IMIVVLGHDH GHGHDHGHSH DHGHSYGERA EQLLEKSKEI RNINVQGAYL
201: HVLGDLIQSI GVMIGGGMIW YNPKWKVIDL ICTLFFSVIV LGTTIKMLRS ILEVLMESTP REIDARQLEK GLMEIEEVVD VHELHIWAIT VGKALFSCHV
301: KVRPEAGDEM VLNKVIDYIW REYRISHVTI QIER
Arabidopsis Description
MTPA1Metal tolerance protein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M271]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.