CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51370	Canola	cytosol, golgi, plasma membrane	75.85	82.72
CDY40170	Canola	extracellular, plasma membrane	31.7	66.67
AT2G29410.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	74.34	52.53
Solyc06g076440.1.1	Tomato	plasma membrane	50.94	36.19
PGSC0003DMT400077991	Potato	plasma membrane	51.32	35.79
VIT_06s0004g05540.t01	Wine grape	plasma membrane	55.47	35.59
KRH24730	Soybean	endoplasmic reticulum, golgi, plasma membrane	51.7	35.31
CDY55925	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	35.09	34.96
CDY41560	Canola	plasma membrane	43.4	34.95
KRH29739	Soybean	cytosol, endoplasmic reticulum, golgi	52.08	34.94
CDY68481	Canola	cytosol	7.92	33.87
CDX80048	Canola	golgi, peroxisome, plasma membrane	46.42	32.71
CDX83353	Canola	golgi, peroxisome, plasma membrane	46.04	31.69
CDY68480	Canola	plasma membrane	17.36	30.46
CDY38099	Canola	golgi, peroxisome, plasma membrane	41.13	29.78
CDY09860	Canola	golgi, plasma membrane, vacuole	36.6	28.45
CDY48014	Canola	plasma membrane	44.91	24.9
CDY11385	Canola	cytosol	9.06	23.53
CDY30290	Canola	plasma membrane, plastid	22.26	7.79
CDY30837	Canola	plasma membrane, plastid	22.26	7.67

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	GO:A0A078EET1	EnsemblPlants:CDX97888	ProteinID:CDX97888	ProteinID:CDX97888.1
InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00105225001	InterPro:IPR027469	InterPro:IPR036837	PFAM:PF01545	PANTHER:PTHR11562
PANTHER:PTHR11562:SF54	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0004EE2685

Description

BnaC04g40510D

Coordinates

chrLK031901:-:1217532..1218737

Molecular Weight (calculated)

29305.0 Da

IEP (calculated)

6.168

GRAVY (calculated)

0.340

Length

265 amino acids

Sequence
(BLAST)

001: MTFKISSEED NIPFASSSDS QLMELEHIRI SKPDDGCEET EEAIPLSCAF TRQEHCIVGG YKANSLAVMT DAAHLLSDVA GLCVSLLAIK VSSWEANPRN
101: SFGFKRLEVL AAFLSVQLIW LAMNINIQGA YLHAMADMIQ SLGVMIGGGI IWVKPKWVLV DLICTLVFSA FALAATLPML KNIFGILMER APRDLDIEKL
201: ERGLRRISGV KIVHDLHVWE ITVGRIVLSC HILPEPGASS LEIIHDVRNF CRKTCGIHHV TVQVE

Best Arabidopsis Sequence Match ( AT2G29410.1 )
(BLAST)

001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE

Arabidopsis Description

MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.