CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
vacuole 2
extracellular 1
endoplasmic reticulum 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29739	Soybean	cytosol, endoplasmic reticulum, golgi	80.15	78.73
CDY51370	Canola	cytosol, golgi, plasma membrane	36.08	57.61
VIT_06s0004g05540.t01	Wine grape	plasma membrane	59.02	55.45
Solyc06g076440.1.1	Tomato	plasma membrane	52.32	54.42
PGSC0003DMT400077991	Potato	plasma membrane	52.58	53.68
Bra039979.1-P	Field mustard	cytosol, golgi, plasma membrane	47.68	52.11
CDX97888	Canola	plasma membrane	35.31	51.7
CDY40170	Canola	extracellular, plasma membrane	15.98	49.21
AT2G29410.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	45.62	47.2
Bra018390.1-P	Field mustard	cytosol, golgi, plasma membrane	13.14	45.13
KRH47778	Soybean	peroxisome	45.1	42.89
KRH06350	Soybean	peroxisome	45.1	41.47
KRH42631	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	18.3	9.02

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:100777590	MapMan:24.2.9.2.3	EMBL:ACUP02007184	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf
InterPro:Cation_efflux_TMD_sf	EnsemblPlantsGene:GLYMA_12G059000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005385	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0009987	GO:GO:0010043	GO:GO:0016020	GO:GO:0016021
GO:GO:0019725	GO:GO:0055085	GO:GO:0061088	GO:GO:0071577	GO:GO:0098655	UniProt:I1LQK9
InterPro:IPR027469	InterPro:IPR036837	EnsemblPlants:KRH24730	ProteinID:KRH24730	ProteinID:KRH24730.1	PFAM:PF01545
PANTHER:PTHR11562	PANTHER:PTHR11562:SF54	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix
UniParc:UPI000233CA04	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:4270381..4272387

Molecular Weight (calculated)

42652.8 Da

IEP (calculated)

6.307

GRAVY (calculated)

0.248

Length

388 amino acids

Sequence
(BLAST)

001: MEHEKAPILV EERTMQEIEI PIASERLDVL PMKADSSCSS VCPFSGQENS VVASKESSKS AKKLSGLIVF YAIVMVVELI GGIKAHSLAV ISDAAHLLSD
101: IAGFSISLFA VWASGWEATP HQSFGYNRLE VLGALASVQL IWLISGFLIY EAIGRILVRN ASVKGKLMLA IAALGFVLNF IMVAWIGHDH SHHHHHHHHG
201: CESSGHDHNH HQCQTDHDHG KEEQSIITDE ENVTLVSSIQ TNTNVLNINL QGAYLHVMAD MIQSVGVMVA GAIIWAKPEW FMVDLVCTLL FSVLSLSTTL
301: PMLRNIYGIL MERTPSEIDI SKLENGLLNI KGVQDVHDLH VWAITVGKCV LSCHVVAEPG ISSIDLLGTI KHYCEKKNQI QHVTIQIE

Best Arabidopsis Sequence Match ( AT2G29410.1 )
(BLAST)

001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE

Arabidopsis Description

MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.