Factsheet for AT2G29410.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	endoplasmic reticulum, golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51370	Canola	cytosol, golgi, plasma membrane	55.73	86.01
Bra039979.1-P	Field mustard	cytosol, golgi, plasma membrane	76.53	80.85
CDX97888	Canola	plasma membrane	52.53	74.34
CDY40170	Canola	extracellular, plasma membrane	22.4	66.67
PGSC0003DMT400077991	Potato	plasma membrane	48.27	47.63
Solyc06g076440.1.1	Tomato	plasma membrane	47.2	47.45
VIT_06s0004g05540.t01	Wine grape	plasma membrane	50.4	45.76
KRH24730	Soybean	endoplasmic reticulum, golgi, plasma membrane	47.2	45.62
KRH29739	Soybean	cytosol, endoplasmic reticulum, golgi	48.0	45.57
AT3G61940.1	Thale cress	plasma membrane	35.47	39.82
AT2G46800.3	Thale cress	golgi, peroxisome, plasma membrane	41.6	39.2
AT3G58810.1	Thale cress	plasma membrane	40.53	35.19
AT2G04620.1	Thale cress	plasma membrane	23.47	11.03

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	EntrezGene:817490	ProteinID:AAC95197.1	ProteinID:AEC08251.1	ArrayExpress:AT2G29410
EnsemblPlantsGene:AT2G29410	RefSeq:AT2G29410	TAIR:AT2G29410	RefSeq:AT2G29410-TAIR-G	EnsemblPlants:AT2G29410.1	TAIR:AT2G29410.1
EMBL:BT014994	EMBL:BT015899	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005385	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812
GO:GO:0006829	GO:GO:0008150	GO:GO:0008324	GO:GO:0009987	GO:GO:0010043	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0046872	GO:GO:0055085	GO:GO:0061088	GO:GO:0071577
GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	Symbol:MTPB1	RefSeq:NP_180502.2	PFAM:PF01545
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0007616	PO:PO:0009046	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR11562	PANTHER:PTHR11562:SF54	UniProt:Q6DBM8	SUPFAM:SSF160240
SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000034EDC4	SEG:seg	:

Description

MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]

Coordinates

chr2:+:12616378..12617987

Molecular Weight (calculated)

42342.6 Da

IEP (calculated)

6.607

GRAVY (calculated)

0.027

Length

375 amino acids

Sequence
(BLAST)

001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.