Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30290 | Canola | plasma membrane, plastid | 72.31 | 76.22 |
| CDY30837 | Canola | plasma membrane, plastid | 73.06 | 75.81 |
| Bra025618.1-P | Field mustard | plasma membrane, plastid | 72.56 | 75.69 |
| KRH42631 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 56.64 | 57.43 |
| PGSC0003DMT400017877 | Potato | plasma membrane | 59.4 | 53.08 |
| Solyc02g067620.1.1 | Tomato | nucleus | 58.77 | 52.0 |
| Os08t0422200-00 | Rice | cytosol | 13.28 | 47.11 |
| HORVU2Hr1G025050.1 | Barley | endoplasmic reticulum, plasma membrane | 26.82 | 45.34 |
| TraesCS2A01G141400.1 | Wheat | plastid | 41.23 | 42.13 |
| TraesCS2D01G144900.1 | Wheat | plastid | 40.98 | 41.76 |
| TraesCS2B01G166400.1 | Wheat | plastid | 41.48 | 41.48 |
| EES15000 | Sorghum | plastid | 40.85 | 40.9 |
| Zm00001d032262_P001 | Maize | plasma membrane, plastid | 40.23 | 40.63 |
| Zm00001d050335_P001 | Maize | plastid | 39.97 | 40.53 |
| VIT_14s0066g02030.t01 | Wine grape | endoplasmic reticulum, golgi, nucleus | 47.74 | 34.57 |
| AT2G29410.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 11.03 | 23.47 |
| AT2G46800.3 | Thale cress | golgi, peroxisome, plasma membrane | 11.53 | 23.12 |
| AT3G58810.1 | Thale cress | plasma membrane | 11.65 | 21.53 |
| AT3G61940.1 | Thale cress | plasma membrane | 8.27 | 19.76 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.3 | EntrezGene:815004 | UniProt:A0A0A8IL98 | EMBL:AB986563 | ProteinID:ANM63264.1 |
| ArrayExpress:AT2G04620 | EnsemblPlantsGene:AT2G04620 | RefSeq:AT2G04620 | TAIR:AT2G04620 | RefSeq:AT2G04620-TAIR-G | EnsemblPlants:AT2G04620.1 |
| TAIR:AT2G04620.1 | Unigene:At.66159 | InterPro:Cation_efflux | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 | InterPro:IPR027469 | RefSeq:NP_001325365.1 | RefSeq:NP_178539.2 |
| PFAM:PF01545 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR11562 |
| PANTHER:PTHR11562:SF13 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI00001622D8 | SEG:seg |
Description
Metal tolerance protein 12 [Source:UniProtKB/TrEMBL;Acc:A0A0A8IL98]
Coordinates
chr2:-:1610506..1612960
Molecular Weight (calculated)
90428.4 Da
IEP (calculated)
7.387
GRAVY (calculated)
-0.019
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDHHHHHHH QHRPNRLSVP QPTIGRTYPS FPYTPTPTPS KTRLSSSSSY RSIHGSKSSL SFLFLILFSL RSLYSLLPFL RSSPSFSLFP FSFLVSLLSF
101: LFSLSFTIIS SFSPSKKDPF LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA RVLFSDTGGI GVRSSKVRGF
201: CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS
301: GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF
401: STMFMKPIRH ILSEKKSRKI ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY GRGRFEVLSG YVNAVFLVLV
501: GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH
601: HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI
701: IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL LEDAGVKDWT LQVESVNS
101: LFSLSFTIIS SFSPSKKDPF LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA RVLFSDTGGI GVRSSKVRGF
201: CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS
301: GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF
401: STMFMKPIRH ILSEKKSRKI ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY GRGRFEVLSG YVNAVFLVLV
501: GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH
601: HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI
701: IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL LEDAGVKDWT LQVESVNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.