Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH23693 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G04620.1 | KRH23693 | AT1G16070.1 | 16792696 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G04620.1 | Thale cress | plasma membrane | 57.43 | 56.64 |
| CDY30290 | Canola | plasma membrane, plastid | 54.13 | 56.27 |
| Bra025618.1-P | Field mustard | plasma membrane, plastid | 54.13 | 55.69 |
| CDY30837 | Canola | plasma membrane, plastid | 54.0 | 55.27 |
| PGSC0003DMT400017877 | Potato | plasma membrane | 54.64 | 48.15 |
| Solyc02g067620.1.1 | Tomato | nucleus | 54.64 | 47.67 |
| HORVU2Hr1G025050.1 | Barley | endoplasmic reticulum, plasma membrane | 26.56 | 44.28 |
| TraesCS2A01G141400.1 | Wheat | plastid | 38.5 | 38.8 |
| TraesCS2D01G144900.1 | Wheat | plastid | 38.5 | 38.7 |
| Os08t0422200-00 | Rice | cytosol | 11.05 | 38.67 |
| TraesCS2B01G166400.1 | Wheat | plastid | 39.14 | 38.6 |
| EES15000 | Sorghum | plastid | 38.88 | 38.39 |
| Zm00001d050335_P001 | Maize | plastid | 38.12 | 38.12 |
| Zm00001d032262_P001 | Maize | plasma membrane, plastid | 37.74 | 37.59 |
| VIT_14s0066g02030.t01 | Wine grape | endoplasmic reticulum, golgi, nucleus | 43.58 | 31.13 |
| KRH47778 | Soybean | peroxisome | 10.42 | 20.1 |
| KRH06350 | Soybean | peroxisome | 10.04 | 18.72 |
| KRH29739 | Soybean | cytosol, endoplasmic reticulum, golgi | 9.28 | 18.48 |
| KRH24730 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 9.02 | 18.3 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.3 | UniProt:A0A0R0IJU7 | EMBL:ACUP02004822 | InterPro:Cation_efflux | InterPro:Cation_efflux_TMD_sf |
| EnsemblPlantsGene:GLYMA_08G102000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005385 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0008324 | GO:GO:0009987 | GO:GO:0010043 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0055085 | GO:GO:0061088 | GO:GO:0071577 | GO:GO:0098655 | InterPro:IPR027469 | EnsemblPlants:KRH42631 |
| ProteinID:KRH42631 | ProteinID:KRH42631.1 | PFAM:PF01545 | PANTHER:PTHR11562 | PANTHER:PTHR11562:SF13 | SUPFAM:SSF161111 |
| TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI0006EE068A | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr8:+:7827868..7830416
Molecular Weight (calculated)
88206.0 Da
IEP (calculated)
7.321
GRAVY (calculated)
-0.096
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MADNDHSHSH PHHHHHHHRP HRLSVPPRST TFGGTPGTQP AFWYSSSTTP TPTPSKTRRS LSFPKSKSKS RSSVFLLLFF SLRSLYSLLP FLRSSPSFSL
101: FPFSFLVSLL SFSLTLSFSL FSSSSTSSKD PFLHHKPKHP LLSPSLTPSQ QRILVTKSIL LALVFLLRFQ ALRYCGTASM ILAELMGSIA ARPRNPYRHN
201: LRGFLSLSLG LLLLSFGWDR IECFPFSPAC LTRRIWPLIL PFASGFLAHY RLVDSGTTLK QLGRKRVRLI TLLFTTVILF VPAVVSFFVF EAEEDSVAFG
301: NLAWPLVNTV VFGVLLSESY SGDDNDDDDS FASSREFLVT FVCTLVLELF YFPELSLWGL LLCGLLLYVG VRDLDPFHSS NEGEFSGDMI MKPIRHVLSE
401: RKSRKIALFL LINAGYMVVE FAAGFMSNSL GLISDACHML FDCAALAIGL YASYISRLPA NNHYNYGRGR FEVLSGYTNA VFLVLVGALI VVESFERILD
501: PQEISTNSLL VVSIGGLVVN VIGLIFFHEE HHHAHGHVLS GSSCSHSHTH TESHSHHTHH HHDHDHDHDH LHSHGHETTI HGSNQEYISV SSDCRDDSCP
601: GDHGHHHNHN HCSHERKHHG ECHDHEDKHS IPSFKHHDAA AHCHDHGEHH DQTGHSCHED APLVRKEHDH RHIDHNMEGI FLHVLADTMG SVGVVISTLL
701: INRSFAPRVP RAHEHELKDA LINVSKIRGV YGIQKFHSWN FTNTDVVGTM HLHVSTDTDK TSAKSQVLHL LRNAGIKDVT LQVECVG
101: FPFSFLVSLL SFSLTLSFSL FSSSSTSSKD PFLHHKPKHP LLSPSLTPSQ QRILVTKSIL LALVFLLRFQ ALRYCGTASM ILAELMGSIA ARPRNPYRHN
201: LRGFLSLSLG LLLLSFGWDR IECFPFSPAC LTRRIWPLIL PFASGFLAHY RLVDSGTTLK QLGRKRVRLI TLLFTTVILF VPAVVSFFVF EAEEDSVAFG
301: NLAWPLVNTV VFGVLLSESY SGDDNDDDDS FASSREFLVT FVCTLVLELF YFPELSLWGL LLCGLLLYVG VRDLDPFHSS NEGEFSGDMI MKPIRHVLSE
401: RKSRKIALFL LINAGYMVVE FAAGFMSNSL GLISDACHML FDCAALAIGL YASYISRLPA NNHYNYGRGR FEVLSGYTNA VFLVLVGALI VVESFERILD
501: PQEISTNSLL VVSIGGLVVN VIGLIFFHEE HHHAHGHVLS GSSCSHSHTH TESHSHHTHH HHDHDHDHDH LHSHGHETTI HGSNQEYISV SSDCRDDSCP
601: GDHGHHHNHN HCSHERKHHG ECHDHEDKHS IPSFKHHDAA AHCHDHGEHH DQTGHSCHED APLVRKEHDH RHIDHNMEGI FLHVLADTMG SVGVVISTLL
701: INRSFAPRVP RAHEHELKDA LINVSKIRGV YGIQKFHSWN FTNTDVVGTM HLHVSTDTDK TSAKSQVLHL LRNAGIKDVT LQVECVG
001: MVDHHHHHHH QHRPNRLSVP QPTIGRTYPS FPYTPTPTPS KTRLSSSSSY RSIHGSKSSL SFLFLILFSL RSLYSLLPFL RSSPSFSLFP FSFLVSLLSF
101: LFSLSFTIIS SFSPSKKDPF LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA RVLFSDTGGI GVRSSKVRGF
201: CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS
301: GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF
401: STMFMKPIRH ILSEKKSRKI ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY GRGRFEVLSG YVNAVFLVLV
501: GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH
601: HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI
701: IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL LEDAGVKDWT LQVESVNS
101: LFSLSFTIIS SFSPSKKDPF LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA RVLFSDTGGI GVRSSKVRGF
201: CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS
301: GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF
401: STMFMKPIRH ILSEKKSRKI ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY GRGRFEVLSG YVNAVFLVLV
501: GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH
601: HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI
701: IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL LEDAGVKDWT LQVESVNS
Arabidopsis Description
Metal tolerance protein 12 [Source:UniProtKB/TrEMBL;Acc:A0A0A8IL98]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.