Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G029710.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G04620.1 | HORVU6Hr1G029710.3 | AT1G16070.1 | 16792696 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G141400.1 | Wheat | plastid | 91.95 | 55.57 |
| TraesCS2D01G144900.1 | Wheat | plastid | 89.19 | 53.77 |
| TraesCS2B01G166400.1 | Wheat | plastid | 88.35 | 52.26 |
| EES15000 | Sorghum | plastid | 69.07 | 40.9 |
| Zm00001d032262_P001 | Maize | plasma membrane, plastid | 66.95 | 40.0 |
| Zm00001d050335_P001 | Maize | plastid | 66.31 | 39.77 |
| CDY30290 | Canola | plasma membrane, plastid | 43.43 | 27.08 |
| AT2G04620.1 | Thale cress | plasma membrane | 45.34 | 26.82 |
| CDY30837 | Canola | plasma membrane, plastid | 43.64 | 26.79 |
| KRH42631 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 44.28 | 26.56 |
| Bra025618.1-P | Field mustard | plasma membrane, plastid | 43.01 | 26.54 |
| PGSC0003DMT400017877 | Potato | plasma membrane | 41.53 | 21.95 |
| Solyc02g067620.1.1 | Tomato | nucleus | 41.1 | 21.51 |
| HORVU2Hr1G082080.4 | Barley | golgi | 10.38 | 17.01 |
| VIT_14s0066g02030.t01 | Wine grape | endoplasmic reticulum, golgi, nucleus | 38.77 | 16.61 |
| HORVU4Hr1G082000.3 | Barley | golgi, mitochondrion, plasma membrane | 11.65 | 12.44 |
| HORVU1Hr1G015500.6 | Barley | plastid | 9.53 | 9.51 |
| Os08t0422200-00 | Rice | cytosol | 2.75 | 5.78 |
| HORVU2Hr1G082090.3 | Barley | cytosol | 0.64 | 1.36 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.3 | UniProt:A0A287HEV8 | InterPro:Cation_efflux | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 | EnsemblPlantsGene:HORVU2Hr1G025050 | EnsemblPlants:HORVU2Hr1G025050.1 |
| InterPro:IPR027469 | PFAM:PF01545 | PANTHER:PTHR11562 | PANTHER:PTHR11562:SF13 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 |
| TMHMM:TMhelix | UniParc:UPI000B47C49D | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:77271014..77275381
Molecular Weight (calculated)
50287.5 Da
IEP (calculated)
9.314
GRAVY (calculated)
0.560
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: PSKTRLPAAG AASPYAAALL RVLALHSFFL LAPAARALPS LPHLFLLPPL LAIISAVAIL LLPSKSQPHP FPALRHLFRP ALLLTASLLL RLASLHLISD
101: PGLVVLADSA GALLARALNR PSRRRVISVA AASVSLAAAS PSHSVLLLAL PFASGLLSSV EHSVSARHVT RSRHARAAVF ALAATFLSVP ALAGLFFLGG
201: TDTSHGVPIG QLWWLLLNAA VFGMALGRRQ AYDSSGSSSR PSMNFAMTFV CTIVLELVYY PKLSLPGFLV CGFILWIASR ELTPSGYVEL GSADESVYEA
301: VMGPVRHILS ERKSRKIAAF LLINTAYMFV EFASGFMSDS LGLLSDACHM LFDCAALAIG LYASYIARLP ANGLYNYGRG RFEVLSGYVN AVFLVLVGAL
401: IVLESFERIL EPREISTSSL LAVSVGGLFV NIIGLVFFHE EHHHAHGGSC SHSHSHSHSH SHDHGHEGPS PS
101: PGLVVLADSA GALLARALNR PSRRRVISVA AASVSLAAAS PSHSVLLLAL PFASGLLSSV EHSVSARHVT RSRHARAAVF ALAATFLSVP ALAGLFFLGG
201: TDTSHGVPIG QLWWLLLNAA VFGMALGRRQ AYDSSGSSSR PSMNFAMTFV CTIVLELVYY PKLSLPGFLV CGFILWIASR ELTPSGYVEL GSADESVYEA
301: VMGPVRHILS ERKSRKIAAF LLINTAYMFV EFASGFMSDS LGLLSDACHM LFDCAALAIG LYASYIARLP ANGLYNYGRG RFEVLSGYVN AVFLVLVGAL
401: IVLESFERIL EPREISTSSL LAVSVGGLFV NIIGLVFFHE EHHHAHGGSC SHSHSHSHSH SHDHGHEGPS PS
001: MVDHHHHHHH QHRPNRLSVP QPTIGRTYPS FPYTPTPTPS KTRLSSSSSY RSIHGSKSSL SFLFLILFSL RSLYSLLPFL RSSPSFSLFP FSFLVSLLSF
101: LFSLSFTIIS SFSPSKKDPF LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA RVLFSDTGGI GVRSSKVRGF
201: CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS
301: GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF
401: STMFMKPIRH ILSEKKSRKI ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY GRGRFEVLSG YVNAVFLVLV
501: GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH
601: HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI
701: IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL LEDAGVKDWT LQVESVNS
101: LFSLSFTIIS SFSPSKKDPF LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA RVLFSDTGGI GVRSSKVRGF
201: CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS
301: GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF
401: STMFMKPIRH ILSEKKSRKI ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY GRGRFEVLSG YVNAVFLVLV
501: GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH
601: HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI
701: IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL LEDAGVKDWT LQVESVNS
Arabidopsis Description
Metal tolerance protein 12 [Source:UniProtKB/TrEMBL;Acc:A0A0A8IL98]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.