Factsheet for Zm00001d032262_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d015485_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G04620.1	Zm00001d015485_P001	AT1G16070.1	16792696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050335_P001	Maize	plastid	82.41	82.72
EES15000	Sorghum	plastid	81.27	80.55
Os08t0422200-00	Rice	cytosol	19.62	68.89
HORVU2Hr1G025050.1	Barley	endoplasmic reticulum, plasma membrane	40.0	66.95
TraesCS2D01G144900.1	Wheat	plastid	61.27	61.81
TraesCS2A01G141400.1	Wheat	plastid	60.51	61.2
TraesCS2B01G166400.1	Wheat	plastid	61.39	60.78
CDY30290	Canola	plasma membrane, plastid	39.75	41.48
Bra025618.1-P	Field mustard	plasma membrane, plastid	40.13	41.44
CDY30837	Canola	plasma membrane, plastid	40.25	41.35
AT2G04620.1	Thale cress	plasma membrane	40.63	40.23
KRH42631	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	37.59	37.74
PGSC0003DMT400017877	Potato	plasma membrane	41.65	36.84
Solyc02g067620.1.1	Tomato	nucleus	41.52	36.36
VIT_14s0066g02030.t01	Wine grape	endoplasmic reticulum, golgi, nucleus	39.24	28.13
Zm00001d010954_P001	Maize	plasma membrane	12.03	23.81
Zm00001d035447_P001	Maize	golgi, peroxisome, plasma membrane	11.14	20.47

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:103643305	MapMan:24.2.9.2.3	UniProt:A0A1D6KPI7	InterPro:Cation_efflux	InterPro:Cation_efflux_TMD_sf
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469
ProteinID:ONM04719.1	PFAM:PF01545	PANTHER:PTHR11562	PANTHER:PTHR11562:SF13	SUPFAM:SSF161111	TIGRFAMs:TIGR01297
TMHMM:TMhelix	UniParc:UPI000222156C	EnsemblPlantsGene:Zm00001d032262	EnsemblPlants:Zm00001d032262_P001	EnsemblPlants:Zm00001d032262_T001	SEG:seg

Description

Cation efflux family protein

Coordinates

chr1:+:219482430..219484802

Molecular Weight (calculated)

86021.6 Da

IEP (calculated)

7.755

GRAVY (calculated)

0.107

Length

790 amino acids

Sequence
(BLAST)

001: MSSRHTPHLR LAVPPRLSAH HSFRFPSTPL PTPSKARGLP SSSASPSSPY AAALLRLLVL HALFLLAPAV RALPSLAHAL ALSPPLALLS AAALLLLHFA
101: AASRKTHQPH HPFPGFPALL GLALLLALSM LLRLVALRIL PSPGLLVLAD SAGSLLARAL RRPSRRRVLS IAVAAFSLVG ISPSVILAIP FTSGFLSSVE
201: QSATARHATR SRRARAAVFA LAAFLCMPAL VGLFFFGGSN AGDGPPDGAV PISPLWWLLL NSAFFGMALG RRQEHGSSGG RPSVDFAMTF LCTLVLELLY
301: YPKLSLPGFL ICGFLLWIAS RELAPAGYVE LGTEDVSESV FEAVMGPVRH ILSERKSRKI AVFLLINTAY MFVEFGSGFM SDSLGLISDA CHMLFDCAAL
401: AIGLYASYIA RLPANGMYNF GRGRFEVLSG YVNAVFLVLV GALIVLESFE RILEPREIST SSLLAVSIGG LVVNLIGLVF FHEEHHHAHG GTCSHSCSRS
501: HSYHGHEHQQ HHGHEDHKHH DHDSANDVNA CFDRHGDDNH RQDHHGNSNS EGIHNNIMDN TCKEKHIHSH SHGHEHHHHE HSENCHQSRD HAHQDCNSNT
601: IEQQLLDISL SNISSHDTKG HSAKARLRPS DSGNSNKSGH RHHIDHNMEG IFLHVLADTM GSVGVVISTL LIKYKGWLIA DPICSVFISV MIVSSVLPLL
701: RNSAEILLQR APRSHEKDLA VALDDIMKIE GVLGVNNFHV WNLTNTDIVS TFHLQVSAEA DKSSIRNKAS QIFHEAGVQD LTIEIECVKR

Best Arabidopsis Sequence Match ( AT2G04620.2 )
(BLAST)

001: MILAELSGTV SARVLFSDTG GIGVRSSKVR GFCVLFAGLL LLSISWDRVD CFPFSSSVES WGFWIYPKEN CLRIWPLLLP FLSGFLGCYE KVSVNWNEIK
101: QLDQKRVRLL SLFLTTVLLF PLAIWSFFFS GSGDDSVSFG NLGWPLANTV VFGVLLSENY NDDKFSSSKK KDSEREFLVT FLCTIVLELF YFPELSLWGL
201: LLCGLLLYIA VRELESVYSD YQEIGMESPE SFSTMFMKPI RHILSEKKSR KIALFLLINT AYMVVEFVAG FMSNSLGLIS DACHMLFDCA ALAIGLYASY
301: ISRLPANHQY NYGRGRFEVL SGYVNAVFLV LVGALIVLES IERILDPQEI STNSLLVVSV GGLLVNIVGL IFFHEEHHHA HGGSGCTHSH SHQSHSHKNE
401: EHHQHSDSHK HEEHHEHDHH HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI
501: KYKGWLVADP ASSIFISILI IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL
601: LEDAGVKDWT LQVESVNS

Arabidopsis Description

Metal tolerance protein 12 [Source:UniProtKB/TrEMBL;Acc:A0A0A8IL98]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.