Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400036862 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G04620.1 | PGSC0003DMT400036862 | AT1G16070.1 | 16792696 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g067620.1.1 | Tomato | nucleus | 96.19 | 95.23 |
| CDY30837 | Canola | plasma membrane, plastid | 52.3 | 60.73 |
| CDY30290 | Canola | plasma membrane, plastid | 51.29 | 60.5 |
| Bra025618.1-P | Field mustard | plasma membrane, plastid | 51.62 | 60.26 |
| AT2G04620.1 | Thale cress | plasma membrane | 53.08 | 59.4 |
| KRH42631 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 48.15 | 54.64 |
| Os08t0422200-00 | Rice | cytosol | 13.21 | 52.44 |
| TraesCS2A01G141400.1 | Wheat | plastid | 36.62 | 41.87 |
| Zm00001d050335_P001 | Maize | plastid | 36.84 | 41.8 |
| EES15000 | Sorghum | plastid | 37.18 | 41.66 |
| Zm00001d032262_P001 | Maize | plasma membrane, plastid | 36.84 | 41.65 |
| HORVU2Hr1G025050.1 | Barley | endoplasmic reticulum, plasma membrane | 21.95 | 41.53 |
| TraesCS2D01G144900.1 | Wheat | plastid | 36.17 | 41.25 |
| TraesCS2B01G166400.1 | Wheat | plastid | 36.84 | 41.23 |
| VIT_14s0066g02030.t01 | Wine grape | endoplasmic reticulum, golgi, nucleus | 44.12 | 35.75 |
| PGSC0003DMT400077991 | Potato | plasma membrane | 9.74 | 22.89 |
| PGSC0003DMT400078996 | Potato | plasma membrane | 8.73 | 22.1 |
| PGSC0003DMT400078898 | Potato | golgi, peroxisome, plasma membrane | 9.52 | 20.48 |
Protein Annotations
| Gene3D:1.20.1510.10 | EntrezGene:102584976 | MapMan:24.2.9.2.3 | ProteinID:AAC49590 | ProteinID:AAC49590.1 | InterPro:Cation_efflux |
| InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 |
| InterPro:IPR027469 | UniProt:M1A9N0 | PFAM:PF01545 | EnsemblPlantsGene:PGSC0003DMG400006943 | PGSC:PGSC0003DMG400006943 | EnsemblPlants:PGSC0003DMT400017877 |
| PANTHER:PTHR11562 | PANTHER:PTHR11562:SF13 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | EMBL:U60071 |
| UniParc:UPI0002961D6D | RefSeq:XP_006357139.1 | SEG:seg | : | : | : |
Description
Cation efflux family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006943]
Coordinates
chr2:-:26198239..26200920
Molecular Weight (calculated)
100115.0 Da
IEP (calculated)
7.422
GRAVY (calculated)
-0.044
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MADNQQHHRH HRPNRLSLPP RTAVPITTST PTTTRTPYPS FNYPPSTPTP TPSKHRVSYL PTKSSPAKTS SLPFLFLLLF SLRSFYSLLP FLQSSPSSFS
101: LFPFSFLVSL LSFLLTFSFS FSFFSSSSSS RDPFYQKNRH GFFSFTRSQY KPLLAKSFLL AIVFLLRFQA LRYCGAAAMI LAEISGNIAS RFISEGKSRD
201: LFDRNRIRSY EVCGFISMFI GLVLLSISWD KIECFPLSSV NVYELGFSLL PRYSCVRIWP MLLPFLSGFL GCYESSSMNW GSLREMGKKQ LRLVSLFFTT
301: VILFVPAVIS MFVFEAEGDS ISIYNLGWPL VNTVVFGVLL SENFTAEKPV SSKDLQKEYL VTYICTVILE LFYFPELSLW GLLICGLLLW VSVRNLNPVD
401: PNYLELGLET SDWFTTSVMK PLRHILGERK SRKIALFLLI NTAYMVVEFA AGFMSNSLGL ISDACHMLFD CAALAIGLYA SYISRLPANG QFNYGRGRFE
501: VLSGYTNAVL LVLVGALIVL ESFERILDPQ EVSTNSLLSV SIGGLLVNIV GLIFFHEEHH HAHGGSCSHS HSHSHSKSDT DCHSNEHHHD HHVHQTKTEF
601: STTSHSHSHS HSPSTCHDHH IHDHDHGGHH IQQEQISIVH ECHESCSSHV GHGHNADYKN QSKKEKEWNE NNTPHSHDHS HDHNHGHHHH GDADQHCHGV
701: TSSSSLIKVH DGSVASFQGP DCSHGHKHVT TDKGVTEKHH HQHRHIDHNM EGIFLHVLAD TLGSVGVVIS TLLIKYKGWL VADPACSIFI SVLIISSVIP
801: LLRNSAEILL QRVPRAHEHD LKEAVNDVMK IKGLSGIQKL HVWSFTNADV IGTLHLLVSS ENDKSSAKTQ VSEIFHHAGV KDLTMQVECI QSS
101: LFPFSFLVSL LSFLLTFSFS FSFFSSSSSS RDPFYQKNRH GFFSFTRSQY KPLLAKSFLL AIVFLLRFQA LRYCGAAAMI LAEISGNIAS RFISEGKSRD
201: LFDRNRIRSY EVCGFISMFI GLVLLSISWD KIECFPLSSV NVYELGFSLL PRYSCVRIWP MLLPFLSGFL GCYESSSMNW GSLREMGKKQ LRLVSLFFTT
301: VILFVPAVIS MFVFEAEGDS ISIYNLGWPL VNTVVFGVLL SENFTAEKPV SSKDLQKEYL VTYICTVILE LFYFPELSLW GLLICGLLLW VSVRNLNPVD
401: PNYLELGLET SDWFTTSVMK PLRHILGERK SRKIALFLLI NTAYMVVEFA AGFMSNSLGL ISDACHMLFD CAALAIGLYA SYISRLPANG QFNYGRGRFE
501: VLSGYTNAVL LVLVGALIVL ESFERILDPQ EVSTNSLLSV SIGGLLVNIV GLIFFHEEHH HAHGGSCSHS HSHSHSKSDT DCHSNEHHHD HHVHQTKTEF
601: STTSHSHSHS HSPSTCHDHH IHDHDHGGHH IQQEQISIVH ECHESCSSHV GHGHNADYKN QSKKEKEWNE NNTPHSHDHS HDHNHGHHHH GDADQHCHGV
701: TSSSSLIKVH DGSVASFQGP DCSHGHKHVT TDKGVTEKHH HQHRHIDHNM EGIFLHVLAD TLGSVGVVIS TLLIKYKGWL VADPACSIFI SVLIISSVIP
801: LLRNSAEILL QRVPRAHEHD LKEAVNDVMK IKGLSGIQKL HVWSFTNADV IGTLHLLVSS ENDKSSAKTQ VSEIFHHAGV KDLTMQVECI QSS
001: MILAELSGTV SARVLFSDTG GIGVRSSKVR GFCVLFAGLL LLSISWDRVD CFPFSSSVES WGFWIYPKEN CLRIWPLLLP FLSGFLGCYE KVSVNWNEIK
101: QLDQKRVRLL SLFLTTVLLF PLAIWSFFFS GSGDDSVSFG NLGWPLANTV VFGVLLSENY NDDKFSSSKK KDSEREFLVT FLCTIVLELF YFPELSLWGL
201: LLCGLLLYIA VRELESVYSD YQEIGMESPE SFSTMFMKPI RHILSEKKSR KIALFLLINT AYMVVEFVAG FMSNSLGLIS DACHMLFDCA ALAIGLYASY
301: ISRLPANHQY NYGRGRFEVL SGYVNAVFLV LVGALIVLES IERILDPQEI STNSLLVVSV GGLLVNIVGL IFFHEEHHHA HGGSGCTHSH SHQSHSHKNE
401: EHHQHSDSHK HEEHHEHDHH HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI
501: KYKGWLVADP ASSIFISILI IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL
601: LEDAGVKDWT LQVESVNS
101: QLDQKRVRLL SLFLTTVLLF PLAIWSFFFS GSGDDSVSFG NLGWPLANTV VFGVLLSENY NDDKFSSSKK KDSEREFLVT FLCTIVLELF YFPELSLWGL
201: LLCGLLLYIA VRELESVYSD YQEIGMESPE SFSTMFMKPI RHILSEKKSR KIALFLLINT AYMVVEFVAG FMSNSLGLIS DACHMLFDCA ALAIGLYASY
301: ISRLPANHQY NYGRGRFEVL SGYVNAVFLV LVGALIVLES IERILDPQEI STNSLLVVSV GGLLVNIVGL IFFHEEHHHA HGGSGCTHSH SHQSHSHKNE
401: EHHQHSDSHK HEEHHEHDHH HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF LHVLADTMGS VGVVISTLLI
501: KYKGWLVADP ASSIFISILI IASVIPLLRN SAEILLQRVP RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL
601: LEDAGVKDWT LQVESVNS
Arabidopsis Description
Metal tolerance protein 12 [Source:UniProtKB/TrEMBL;Acc:A0A0A8IL98]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.