CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97888	Canola	plasma membrane	82.72	75.85
CDY40170	Canola	extracellular, plasma membrane	34.16	65.87
Bra039979.1-P	Field mustard	cytosol, golgi, plasma membrane	89.3	61.13
AT2G29410.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	86.01	55.73
CDY68481	Canola	cytosol	9.47	37.1
Solyc06g076440.1.1	Tomato	plasma membrane	55.97	36.46
CDY55925	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	39.51	36.09
KRH24730	Soybean	endoplasmic reticulum, golgi, plasma membrane	57.61	36.08
PGSC0003DMT400077991	Potato	plasma membrane	55.97	35.79
KRH29739	Soybean	cytosol, endoplasmic reticulum, golgi	56.38	34.68
CDY41560	Canola	plasma membrane	46.91	34.65
VIT_06s0004g05540.t01	Wine grape	plasma membrane	58.44	34.38
CDX80048	Canola	golgi, peroxisome, plasma membrane	48.15	31.12
CDY68480	Canola	plasma membrane	18.93	30.46
CDX83353	Canola	golgi, peroxisome, plasma membrane	48.15	30.39
CDY38099	Canola	golgi, peroxisome, plasma membrane	42.8	28.42
CDY09860	Canola	golgi, plasma membrane, vacuole	39.51	28.15
CDY11385	Canola	cytosol	10.7	25.49
CDY48014	Canola	plasma membrane	48.15	24.48
CDY30837	Canola	plasma membrane, plastid	22.63	7.15
CDY30290	Canola	plasma membrane, plastid	22.22	7.13

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	GO:A0A078IJZ2	UniProt:A0A078IJZ2	EnsemblPlants:CDY51370	ProteinID:CDY51370
ProteinID:CDY51370.1	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	EnsemblPlantsGene:GSBRNA2T00003277001	InterPro:IPR027469	InterPro:IPR036837
PFAM:PF01545	PANTHER:PTHR11562	PANTHER:PTHR11562:SF54	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297
TMHMM:TMhelix	UniParc:UPI0004EEBDF6	:	:	:	:

Description

BnaA04g28640DBnaA04g28640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJZ2]

Coordinates

chrLK032988:-:60274..61511

Molecular Weight (calculated)

27039.3 Da

IEP (calculated)

6.228

GRAVY (calculated)

0.339

Length

243 amino acids

Sequence
(BLAST)

001: MELEHIRISK PDDDYEETEE PIPLSCAFTR QEHCIVGGYK ANSLAVMTDA AHLLSDVAGL CVSLLAIKIS SWEANPRNSF GFKRLEVLAA FLSVQLIWLE
101: MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPMLKN IFGILMERAP RDIDIDKLER GLKRINGVKV VHDLHVWEIT
201: VGRIVLSCHV LPEPGASSLE IINDVRNFCR KTCGIHHVTV QVE

Best Arabidopsis Sequence Match ( AT2G29410.1 )
(BLAST)

001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE

Arabidopsis Description

MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.