Factsheet for Solyc06g076440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
golgi 2
vacuole 2
extracellular 1
plasma membrane 3
endoplasmic reticulum 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077991	Potato	plasma membrane	87.67	86.05
CDY51370	Canola	cytosol, golgi, plasma membrane	36.46	55.97
VIT_06s0004g05540.t01	Wine grape	plasma membrane	59.79	54.0
KRH24730	Soybean	endoplasmic reticulum, golgi, plasma membrane	54.42	52.32
KRH29739	Soybean	cytosol, endoplasmic reticulum, golgi	54.42	51.39
Bra039979.1-P	Field mustard	cytosol, golgi, plasma membrane	48.79	51.27
CDX97888	Canola	plasma membrane	36.19	50.94
AT2G29410.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	47.45	47.2
CDY40170	Canola	extracellular, plasma membrane	15.01	44.44
Bra018390.1-P	Field mustard	cytosol, golgi, plasma membrane	12.6	41.59
Solyc07g007060.1.1	Tomato	plasma membrane	41.82	41.49
Solyc02g067620.1.1	Tomato	nucleus	21.18	8.76

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005385	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0009987
GO:GO:0010043	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0061088
GO:GO:0071577	GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	UniProt:K4CA04	PFAM:PF01545
PANTHER:PTHR11562	PANTHER:PTHR11562:SF54	SUPFAM:SSF160240	SUPFAM:SSF161111	EnsemblPlantsGene:Solyc06g076440.1	EnsemblPlants:Solyc06g076440.1.1
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000276711A	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:47496433..47497554

Molecular Weight (calculated)

41680.5 Da

IEP (calculated)

6.657

GRAVY (calculated)

0.168

Length

373 amino acids

Sequence
(BLAST)

001: MSEMKQLQGA KCNGNCNRAH FSCNPICSFS EQEHSLLDSR QRSKSSMKLC GLIIFYVMVM AVETIGGVKA HSLAVLTDAA HLLSDVVGFS ISLFAVWVSG
101: WDATKEHSFG YHRLEVLGAL ISVQLIWLIS GFLIYEATER MFHTNAKVNG KLMFAIAAFG LIINFISVVW LGHDHSLHSH SFSPCKDHDH GHGHDHNHDH
201: EMQELHPRNE EESSKLVASC HSCSKPSNIN IEGAYLHVIS DLIQSVGVMI AGAIMWYKPE WLVVDLLCTI FFSIFALSTT VPMLKTIFSL LMERTPKEVD
301: IVQLENGLKS LAGVKDVHDL HVWAITIGKI VLSCHVVTEP GVNHYEIIQN VREYCDTTYR IHHVTIQVEP GSL

Best Arabidopsis Sequence Match ( AT2G29410.1 )
(BLAST)

001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE

Arabidopsis Description

MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.