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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • golgi 1
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039979.1-P Field mustard cytosol, golgi, plasma membrane 69.03 21.97
KRH24730 Soybean endoplasmic reticulum, golgi, plasma membrane 45.13 13.14
Bra004506.1-P Field mustard golgi, peroxisome, plasma membrane 42.48 12.73
Solyc06g076440.1.1 Tomato plasma membrane 41.59 12.6
VIT_06s0004g05540.t01 Wine grape plasma membrane 45.13 12.35
PGSC0003DMT400077991 Potato plasma membrane 40.71 12.11
KRH29739 Soybean cytosol, endoplasmic reticulum, golgi 41.59 11.9
Bra000432.1-P Field mustard golgi, peroxisome, plasma membrane 38.94 11.43
Bra025618.1-P Field mustard plasma membrane, plastid 13.27 1.96
Bra007643.1-P Field mustard cytosol 0.88 0.98
Protein Annotations
Gene3D:1.20.1510.10MapMan:24.2.9.2.3EnsemblPlantsGene:Bra018390EnsemblPlants:Bra018390.1EnsemblPlants:Bra018390.1-PInterPro:Cation_efflux
InterPro:Cation_efflux_TMD_sfGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006812
GO:GO:0008150GO:GO:0008324GO:GO:0016020GO:GO:0016021GO:GO:0055085GO:GO:0098655
InterPro:IPR027469UniProt:M4DPE9PFAM:PF01545PANTHER:PTHR11562PANTHER:PTHR11562:SF54SUPFAM:SSF161111
TMHMM:TMhelixUniParc:UPI0002547D69SEG:seg:::
Description
AT2G29410 (E=9e-030) MTPB1, ATMTPB1 | MTPB1 (METAL TOLERANCE PROTEIN B1); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter
Coordinates
chrA05:-:7897867..7898298
Molecular Weight (calculated)
12580.3 Da
IEP (calculated)
4.873
GRAVY (calculated)
0.211
Length
113 amino acids
Sequence
(BLAST)
001: MELEHIRISK PDQKEEETES PSRIEEVIPL SCAFTRQKSL EILMANSLTV LTDAAHLLSD VPGLSVSLLA IKVSSWEANP RNSFGFKRLE VLAAFLSVQL
101: IWLVSGVIIH EPI
Best Arabidopsis Sequence Match ( AT2G29410.1 )
(BLAST)
001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE
Arabidopsis Description
MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.