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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51370 Canola cytosol, golgi, plasma membrane 61.13 89.3
AT2G29410.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 80.85 76.53
Bra018390.1-P Field mustard cytosol, golgi, plasma membrane 21.97 69.03
Solyc06g076440.1.1 Tomato plasma membrane 51.27 48.79
KRH24730 Soybean endoplasmic reticulum, golgi, plasma membrane 52.11 47.68
PGSC0003DMT400077991 Potato plasma membrane 50.99 47.63
VIT_06s0004g05540.t01 Wine grape plasma membrane 54.65 46.97
KRH29739 Soybean cytosol, endoplasmic reticulum, golgi 50.99 45.82
Bra004506.1-P Field mustard golgi, peroxisome, plasma membrane 44.23 41.64
Bra000432.1-P Field mustard golgi, peroxisome, plasma membrane 43.38 40.0
Bra007643.1-P Field mustard cytosol 7.32 25.49
Bra025618.1-P Field mustard plasma membrane, plastid 23.38 10.85
Protein Annotations
Gene3D:1.20.1510.10MapMan:24.2.9.2.3EnsemblPlantsGene:Bra039979EnsemblPlants:Bra039979.1EnsemblPlants:Bra039979.1-PInterPro:Cation_efflux
InterPro:Cation_efflux_CTD_sfInterPro:Cation_efflux_TMD_sfncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0008324GO:GO:0016020GO:GO:0016021
GO:GO:0055085GO:GO:0098655InterPro:IPR027469InterPro:IPR036837UniProt:M4FFV5PFAM:PF01545
PANTHER:PTHR11562PANTHER:PTHR11562:SF54SUPFAM:SSF160240SUPFAM:SSF161111TIGRFAMs:TIGR01297TMHMM:TMhelix
UniParc:UPI0002544406SEG:seg::::
Description
AT2G29410 (E=9e-146) MTPB1, ATMTPB1 | MTPB1 (METAL TOLERANCE PROTEIN B1); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter
Coordinates
chrA04:+:13210947..13212014
Molecular Weight (calculated)
40198.1 Da
IEP (calculated)
6.435
GRAVY (calculated)
0.118
Length
355 amino acids
Sequence
(BLAST)
001: MELEHIRISK PEDDYEETEE AVPLSCAFTR QEHCVSESRE REESIQRLTS LICIYLIVML VQIVGGYKAN SLAVMTDAAH LLSDVAGLCV SLLAIKISSW
101: EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIYEAIQRL LTRSREVNGE IMFGISAFGF FMNLVMVIWL GHNHNHHHHH HHHHHHHSHK EEEEEEMDPL
201: KGGMEEKSSS KEMNINIQGA YLHAMADMIQ SLGVMIGGGI IWVKPKWVLV DLICTLVFSA FALAATFPML KNIFGILMER APRDLDIEKL ERGLMRINGV
301: KVVHDLHVWE ITVGRIVLSC HVLPEPGASS LEIINDVRNF CRKTCGIHHV TVQVE
Best Arabidopsis Sequence Match ( AT2G29410.1 )
(BLAST)
001: MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV
101: SLLAIKVSSW EANPRNSFGF KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL GHNHSHHHHD HHHHHHNHKH
201: QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP
301: RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR KSYGIYHATV QVESE
Arabidopsis Description
MTPBMetal tolerance protein B [Source:UniProtKB/Swiss-Prot;Acc:Q6DBM8]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.