Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11385 | Canola | cytosol | 88.71 | 53.92 |
| CDY55925 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 93.55 | 21.8 |
| CDY41560 | Canola | plasma membrane | 77.42 | 14.59 |
| CDX80048 | Canola | golgi, peroxisome, plasma membrane | 77.42 | 12.77 |
| CDY40170 | Canola | extracellular, plasma membrane | 25.81 | 12.7 |
| CDX83353 | Canola | golgi, peroxisome, plasma membrane | 77.42 | 12.47 |
| CDY38099 | Canola | golgi, peroxisome, plasma membrane | 64.52 | 10.93 |
| CDY48014 | Canola | plasma membrane | 77.42 | 10.04 |
| CDY51370 | Canola | cytosol, golgi, plasma membrane | 37.1 | 9.47 |
| CDX97888 | Canola | plasma membrane | 33.87 | 7.92 |
| CDY09860 | Canola | golgi, plasma membrane, vacuole | 37.1 | 6.74 |
| AT3G61940.1 | Thale cress | plasma membrane | 32.26 | 5.99 |
| CDY30290 | Canola | plasma membrane, plastid | 17.74 | 1.45 |
| CDY30837 | Canola | plasma membrane, plastid | 17.74 | 1.43 |
| CDY68480 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY68481 | EnsemblPlantsGene:GSBRNA2T00074798001 | GO:A0A078JS68 | InterPro:Cation_efflux_CTD_sf | InterPro:IPR036837 | PANTHER:PTHR11562 |
| PANTHER:PTHR11562:SF80 | ProteinID:CDY68481 | ProteinID:CDY68481.1 | SUPFAM:SSF160240 | UniParc:UPI0004EF3927 | UniProt:A0A078JS68 |
| MapMan:24.2.9.2.3 | : | : | : | : | : |
Description
BnaA04g27500DBnaA04g27500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS68]
Coordinates
chrLK037408:+:1353..1541
Molecular Weight (calculated)
7251.8 Da
IEP (calculated)
5.493
GRAVY (calculated)
0.152
Length
62 amino acids
Sequence
(BLAST)
(BLAST)
1: MEIEEVVSVH ELHIWAITVG KALFSCHVKI KQEADDAMVL NKVIDYIWRE YSISHVSIQI ER
001: MDSRRSKVCG ETACGFSTSS SDAKKRAASM RKLCFVVVLC LLFMSIEVVC GIKANSLAIL ADAAHLLTDV GAFAISMLSL WASSWEANPR QSYGFFRIEI
101: LGTLVSIQLI WLLTGILVYE AVTRLVQETN DDVDGFFMVL VAAFGLVVNI IMIVVLGHDH GHGHDHGHSH DHGHSYGERA EQLLEKSKEI RNINVQGAYL
201: HVLGDLIQSI GVMIGGGMIW YNPKWKVIDL ICTLFFSVIV LGTTIKMLRS ILEVLMESTP REIDARQLEK GLMEIEEVVD VHELHIWAIT VGKALFSCHV
301: KVRPEAGDEM VLNKVIDYIW REYRISHVTI QIER
101: LGTLVSIQLI WLLTGILVYE AVTRLVQETN DDVDGFFMVL VAAFGLVVNI IMIVVLGHDH GHGHDHGHSH DHGHSYGERA EQLLEKSKEI RNINVQGAYL
201: HVLGDLIQSI GVMIGGGMIW YNPKWKVIDL ICTLFFSVIV LGTTIKMLRS ILEVLMESTP REIDARQLEK GLMEIEEVVD VHELHIWAIT VGKALFSCHV
301: KVRPEAGDEM VLNKVIDYIW REYRISHVTI QIER
Arabidopsis Description
MTPA1Metal tolerance protein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M271]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.