CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41560	Canola	plasma membrane	61.72	89.67
CDX80048	Canola	golgi, peroxisome, plasma membrane	65.9	83.78
CDX83353	Canola	golgi, peroxisome, plasma membrane	67.36	83.64
AT2G46800.3	Thale cress	golgi, peroxisome, plasma membrane	65.69	78.89
CDY68481	Canola	cytosol	10.04	77.42
CDY55925	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	41.0	73.68
CDY68480	Canola	plasma membrane	23.01	72.85
VIT_15s0048g02520.t01	Wine grape	endoplasmic reticulum, golgi, peroxisome	58.58	66.99
KRH47778	Soybean	peroxisome	56.28	65.93
CDY38099	Canola	golgi, peroxisome, plasma membrane	50.21	65.57
KRH06350	Soybean	peroxisome	57.32	64.93
CDY09860	Canola	golgi, plasma membrane, vacuole	44.35	62.17
CDY11385	Canola	cytosol	11.51	53.92
CDY51370	Canola	cytosol, golgi, plasma membrane	24.48	48.15
CDX97888	Canola	plasma membrane	24.9	44.91
CDY40170	Canola	extracellular, plasma membrane	11.51	43.65
CDY30837	Canola	plasma membrane, plastid	20.08	12.48
CDY30290	Canola	plasma membrane, plastid	19.04	12.02

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	GO:A0A078IFC0	UniProt:A0A078IFC0	EnsemblPlants:CDY48014	ProteinID:CDY48014
ProteinID:CDY48014.1	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	EnsemblPlantsGene:GSBRNA2T00088660001	InterPro:IPR027469	InterPro:IPR036837
PFAM:PF01545	PANTHER:PTHR11562	PANTHER:PTHR11562:SF80	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297
TMHMM:TMhelix	UniParc:UPI0004EE5CA1	SEG:seg	:	:	:

Description

BnaA04g26760DBnaA04g26760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFC0]

Coordinates

chrLK032749:-:69884..72124

Molecular Weight (calculated)

53073.7 Da

IEP (calculated)

7.489

GRAVY (calculated)

0.091

Length

478 amino acids

Sequence
(BLAST)

001: MIKATLNRNS RFSAKREKKK KRTPERKGKE KLPPSHLSWP PHTFLFINKR LLPFSLTFFK GLGGVVNLSN RQLQPLDSLL SLCRTSSCYM TSSAIHMASS
101: SPQHCHIIEV NRGKSVEEST TILASKACGE APCGFSDLNN ASGDAQERNA SMRKLCIAVV LCLLFMTVEV FGGIKANSLA ILTDAAHLLS DVAAFAISLF
201: SLWAAGWEAT PRQTYGFFRI EILGALVSIQ LIWLLTGILV YEAIIRLLSE TSEVNGFLMF LVAAFGLLVN IIMAVLLGHD HGHGHGHGHD HHSHGVTVTT
301: HHHHHGHGED KHHHHAHGDE DVTEQLLEKS EKRKRNINVQ GAYLHVLGDS IQSVGVMIGG GIIWYNPEWK IVDLICTLVF SVIVLGTTIN MIRSILEVLM
401: ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNITPEA DADMVLNKVI DYIRREYNIS HVTIQIER

Best Arabidopsis Sequence Match ( AT2G46800.2 )
(BLAST)

001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER

Arabidopsis Description

MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.