Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G499000.1 | Wheat | plasma membrane | 92.36 | 96.4 |
| TraesCS4B01G327000.1 | Wheat | plastid | 93.6 | 95.24 |
| HORVU4Hr1G082000.3 | Barley | golgi, mitochondrion, plasma membrane | 87.93 | 80.77 |
| TraesCS1D01G074400.1 | Wheat | peroxisome | 80.3 | 77.43 |
| Zm00001d010954_P001 | Maize | plasma membrane | 73.65 | 74.94 |
| Os05t0128400-01 | Rice | plasma membrane | 77.09 | 74.88 |
| OQU77333 | Sorghum | peroxisome | 76.35 | 73.81 |
| GSMUA_Achr10P... | Banana | golgi, peroxisome, vacuole | 62.32 | 73.76 |
| Solyc07g007060.1.1 | Tomato | plasma membrane | 67.24 | 72.61 |
| PGSC0003DMT400078996 | Potato | plasma membrane | 62.32 | 71.67 |
| Bra004506.1-P | Field mustard | golgi, peroxisome, plasma membrane | 62.56 | 67.37 |
| Zm00001d035447_P001 | Maize | golgi, peroxisome, plasma membrane | 70.44 | 66.51 |
| Bra000432.1-P | Field mustard | golgi, peroxisome, plasma membrane | 63.05 | 66.49 |
| PGSC0003DMT400078898 | Potato | golgi, peroxisome, plasma membrane | 67.49 | 66.02 |
| CDY38099 | Canola | golgi, peroxisome, plasma membrane | 58.62 | 65.03 |
| KRH47778 | Soybean | peroxisome | 64.78 | 64.46 |
| KRH06350 | Soybean | peroxisome | 65.76 | 63.27 |
| CDY09860 | Canola | golgi, plasma membrane, vacuole | 51.23 | 61.0 |
| GSMUA_Achr7P15550_001 | Banana | plasma membrane | 57.88 | 60.1 |
| AT3G58810.1 | Thale cress | plasma membrane | 63.3 | 59.49 |
| VIT_02s0025g02900.t01 | Wine grape | mitochondrion, plasma membrane | 66.5 | 56.72 |
| Bra007643.1-P | Field mustard | cytosol | 11.58 | 46.08 |
| TraesCS2D01G144900.1 | Wheat | plastid | 25.12 | 13.03 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.3 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 | InterPro:IPR036837 | PFAM:PF01545 |
| PANTHER:PTHR11562 | PANTHER:PTHR11562:SF80 | SUPFAM:SSF160240 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS4D01G323700 | EnsemblPlants:TraesCS4D01G323700.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:-:484775993..484778643
Molecular Weight (calculated)
44386.0 Da
IEP (calculated)
6.124
GRAVY (calculated)
0.032
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNHTSSPPH EVTMDISSAS GSKMCRGASC DFADSTNTSK DAKERSASMR KLLIAVILCV IFMAVEVVGG IKANSLAILT DAAHLLSDVA AFAISLFSLW
101: AAGWEATPRQ SYGFFRIEIL GALVSIQLIW LLAGILVYEA IMRLVNGSGG EVQGSLMFAV SAFGLFVNIV MAVLLGHDHG HGGHGHGHSH DHGHDHGDSE
201: DDHGHDHEQG HAHHHEHSHG SSITVTTHHH HHSTTGQHQD DAEEPLLKHD DGAKEAKEPR QRNINVHSAY LHVIGDSIQS IGVMVGGALI WYKPEWKIID
301: LICTLIFSVI VLFTTVRMVR NLLEVLMEST PREVDATRLE GGLLQMEGVV AVHELHIWAI TVGKVLLACH VTIEQDADAD QMLDKVIGYI KEEYNIGHVT
401: IQIERE
101: AAGWEATPRQ SYGFFRIEIL GALVSIQLIW LLAGILVYEA IMRLVNGSGG EVQGSLMFAV SAFGLFVNIV MAVLLGHDHG HGGHGHGHSH DHGHDHGDSE
201: DDHGHDHEQG HAHHHEHSHG SSITVTTHHH HHSTTGQHQD DAEEPLLKHD DGAKEAKEPR QRNINVHSAY LHVIGDSIQS IGVMVGGALI WYKPEWKIID
301: LICTLIFSVI VLFTTVRMVR NLLEVLMEST PREVDATRLE GGLLQMEGVV AVHELHIWAI TVGKVLLACH VTIEQDADAD QMLDKVIGYI KEEYNIGHVT
401: IQIERE
001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER
Arabidopsis Description
MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.