Factsheet for TraesCS4B01G327000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, peroxisome, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	golgi
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G323700.1	Wheat	golgi, peroxisome, plasma membrane	95.24	93.6
TraesCS5A01G499000.1	Wheat	plasma membrane	90.48	92.8
HORVU4Hr1G082000.3	Barley	golgi, mitochondrion, plasma membrane	87.97	79.41
TraesCS1B01G090400.2	Wheat	plasma membrane	81.95	75.87
Os05t0128400-01	Rice	plasma membrane	77.69	74.16
GSMUA_Achr10P...	Banana	golgi, peroxisome, vacuole	63.66	74.05
Zm00001d010954_P001	Maize	plasma membrane	73.68	73.68
OQU77333	Sorghum	peroxisome	76.44	72.62
Solyc07g007060.1.1	Tomato	plasma membrane	66.92	71.01
PGSC0003DMT400078996	Potato	plasma membrane	62.41	70.54
Zm00001d035447_P001	Maize	golgi, peroxisome, plasma membrane	71.93	66.74
Bra004506.1-P	Field mustard	golgi, peroxisome, plasma membrane	62.66	66.31
Bra000432.1-P	Field mustard	golgi, peroxisome, plasma membrane	62.91	65.19
CDY38099	Canola	golgi, peroxisome, plasma membrane	59.15	64.48
PGSC0003DMT400078898	Potato	golgi, peroxisome, plasma membrane	66.92	64.34
KRH47778	Soybean	peroxisome	65.41	63.97
KRH06350	Soybean	peroxisome	66.17	62.56
CDY09860	Canola	golgi, plasma membrane, vacuole	52.38	61.29
GSMUA_Achr7P15550_001	Banana	plasma membrane	58.4	59.59
AT3G58810.1	Thale cress	plasma membrane	63.91	59.03
VIT_02s0025g02900.t01	Wine grape	mitochondrion, plasma membrane	66.67	55.88
Bra007643.1-P	Field mustard	cytosol	11.78	46.08
TraesCS2B01G166400.1	Wheat	plastid	25.31	12.66

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.3	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR027469	InterPro:IPR036837	PFAM:PF01545
PANTHER:PTHR11562	PANTHER:PTHR11562:SF80	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4B01G327000	EnsemblPlants:TraesCS4B01G327000.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:617856962..617859705

Molecular Weight (calculated)

43582.1 Da

IEP (calculated)

6.234

GRAVY (calculated)

0.070

Length

399 amino acids

Sequence
(BLAST)

001: MDSHTNSSSP HEVTMDISSA SGSKMCRGAS CDFADSTNTS KDAKERSASM RKLLTAVILC VIFMAVEVVG GIKANSLAIL TDAAHLLSDV AAFAISLFSL
101: WAAGWEATPR QSYGFFRIEI LGALVSIQLI WLLAGILVYE AIMRLVNGSG GEVQGSLMFA VSAFGLFVNI VMAVLLGHDH GHGGHGHSHD HGHDHGDSED
201: NHGHDHEQGH AHHHEHSHGS SITVTTHHHS HSTTGQHQDD AEEPLLKTAK EPRRRNINVH SAYLHVIGDS IQSIGVMVGG ALIWYKPEWK IIDLICTLIF
301: SVIVLFTTVR MVRNLLEVLM ESTPREVDAT RLEGGLLQME GVVAVHELHI WAITVGKVLL ACHVTIEQDA DADQMLDKVI GYIKEEYNIG HVTIQIERE

Best Arabidopsis Sequence Match ( AT2G46800.1 )
(BLAST)

001: MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI
101: SLFSLWAAGW EATPRQTYGF FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL GHDHGHSHGH GHGHGHDHHN
201: HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF
301: SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER

Arabidopsis Description

MTP1ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.