Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G034070.2 | Barley | plastid | 28.02 | 11.67 |
| HORVU4Hr1G017950.27 | Barley | nucleus | 21.26 | 8.27 |
| HORVU5Hr1G037060.1 | Barley | nucleus, plastid | 22.71 | 5.68 |
| HORVU4Hr1G008820.1 | Barley | nucleus | 25.12 | 5.46 |
| HORVU2Hr1G082880.12 | Barley | nucleus | 6.28 | 3.42 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G082870.3 | EnsemblPlantsGene:HORVU2Hr1G082870 | Gene3D:1.10.10.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:Homeobox-like_sf | InterPro:IPR007526 | InterPro:IPR036388 | InterPro:SWIRM |
| InterPro:WH-like_DNA-bd_sf | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF41 | PFAM:PF04433 | PFscan:PS50934 | SEG:seg |
| SUPFAM:SSF46689 | UniParc:UPI000B47E7A4 | UniProt:A0A287INW0 | MapMan:12.4.2.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:+:602417369..602418002
Molecular Weight (calculated)
22677.9 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.276
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: RAAWAGKLGR LTNCASSAPA GWFRWDDIHE TERQALPDFF GGAGGTGFGT ASRNPRIYRE YRDYIINKYR EDPARRLTFT EVRKALVGDA TLLRKLFGFL
101: DAFGLINFSA TSSRPAAQQP GPGAVVEAPL GLQVTPRPPA SYFAEERLGG GTGDGAFRLP QLTSYTDVFG EWAPGKGPIC GFCGEECKDG KVETLKVLPF
201: FVILYYH
101: DAFGLINFSA TSSRPAAQQP GPGAVVEAPL GLQVTPRPPA SYFAEERLGG GTGDGAFRLP QLTSYTDVFG EWAPGKGPIC GFCGEECKDG KVETLKVLPF
201: FVILYYH
001: MEATDPSAEI ELYTIPAQSS WFLWDDIHEI ERREFAEFFT ESSITRTPKV YKEYRDFIIN KFREDTCRRL TFTSVRKFLV GDVNLLQKVF LFLEKWGLIN
101: FSSSLKKNDH LLSVDNAKIE QGTPAGIRVT ATPNSLRPIT APPLVEERVE TGIKVPPLTS YSDVFSDLKK PDHVLVCAHC GERCDSPFYQ HNKGIVNICE
201: KCFKNGNYGE NNTADDFKLI GNSAAAVWTE EEILLLLESV LKHGDDWELI SQSVSTKSRL DCISKLIELP FGEFLMGSAS GRLNPSILTE DENTEQVQTD
301: GQEHEETETR EEKEDRVNED EPPAKRKRVA LISEGDSSLM KQVAAMASKV GPSVATAAAK AALAALCDEA SCPKEIFDTD DYSNFTVDRF DSLSPQFACG
401: LASHVLH
101: FSSSLKKNDH LLSVDNAKIE QGTPAGIRVT ATPNSLRPIT APPLVEERVE TGIKVPPLTS YSDVFSDLKK PDHVLVCAHC GERCDSPFYQ HNKGIVNICE
201: KCFKNGNYGE NNTADDFKLI GNSAAAVWTE EEILLLLESV LKHGDDWELI SQSVSTKSRL DCISKLIELP FGEFLMGSAS GRLNPSILTE DENTEQVQTD
301: GQEHEETETR EEKEDRVNED EPPAKRKRVA LISEGDSSLM KQVAAMASKV GPSVATAAAK AALAALCDEA SCPKEIFDTD DYSNFTVDRF DSLSPQFACG
401: LASHVLH
Arabidopsis Description
SWI3ASWI/SNF complex subunit SWI3A [Source:UniProtKB/Swiss-Prot;Acc:Q8W475]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.