Factsheet for HORVU3Hr1G002000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G010800.1	Wheat	extracellular	96.07	96.07
TraesCS3A01G012400.1	Wheat	extracellular	94.32	95.58
TraesCS3D01G011000.1	Wheat	extracellular	93.45	94.69
TraesCS3A01G012600.1	Wheat	extracellular	94.32	94.32
EES14666	Sorghum	extracellular	80.79	81.5
HORVU0Hr1G009460.4	Barley	extracellular	81.22	81.22
HORVU4Hr1G090120.1	Barley	extracellular	80.35	80.35
HORVU0Hr1G009450.1	Barley	extracellular	79.48	78.79
HORVU3Hr1G001990.1	Barley	extracellular, plastid, vacuole	86.46	78.26
HORVU0Hr1G009470.2	Barley	plastid	82.1	77.69
HORVU4Hr1G090130.1	Barley	endoplasmic reticulum, extracellular, plastid	82.1	76.42
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	63.32	74.36
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	69.43	73.27
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	69.43	73.27
VIT_14s0128g01040.t01	Wine grape	peroxisome	39.3	73.17
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	68.56	72.35
GSMUA_Achr5P26710_001	Banana	cytosol	63.32	72.14
HORVU5Hr1G010880.2	Barley	extracellular	72.05	72.05
HORVU1Hr1G010740.1	Barley	extracellular	69.0	71.82
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	64.19	71.71
HORVU1Hr1G010600.1	Barley	extracellular, vacuole	67.25	71.63
VIT_14s0006g02380.t01	Wine grape	extracellular	66.38	69.72
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	67.25	69.68
HORVU1Hr1G010710.1	Barley	vacuole	68.12	69.33
VIT_14s0006g02350.t01	Wine grape	extracellular	66.81	69.23
VIT_14s0006g02370.t01	Wine grape	extracellular	66.81	69.23
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	66.81	69.23
VIT_14s0006g02430.t01	Wine grape	extracellular	65.5	68.81
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	66.38	68.78
VIT_14s0006g02390.t01	Wine grape	extracellular	66.38	68.78
VIT_14s0060g02700.t01	Wine grape	cytosol	63.32	68.4
VIT_16s0039g02920.t01	Wine grape	plastid	54.59	67.93
HORVU1Hr1G010640.1	Barley	extracellular, vacuole	63.32	67.76
HORVU7Hr1G091800.1	Barley	endoplasmic reticulum, extracellular, plastid	69.43	67.66
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	65.07	67.42
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	64.63	67.27
HORVU3Hr1G011990.3	Barley	extracellular	68.12	67.24
VIT_14s0060g02730.t01	Wine grape	peroxisome	60.7	67.15
HORVU4Hr1G090190.4	Barley	extracellular	81.66	66.79
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	63.76	66.36
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	63.76	66.36
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	63.76	66.36
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	63.76	66.36
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	63.76	66.36
VIT_16s0013g00010.t01	Wine grape	extracellular	65.07	66.22
VIT_16s0013g00060.t01	Wine grape	extracellular	65.07	66.22
VIT_16s0039g02860.t01	Wine grape	extracellular	65.07	66.22
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	56.77	65.99
PGSC0003DMT400040093	Potato	extracellular	65.5	65.79
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	64.63	65.78
GSMUA_Achr5P26700_001	Banana	extracellular	51.09	65.36
KRG92599	Soybean	extracellular	63.32	65.32
KRH07003	Soybean	extracellular	62.88	65.16
VIT_14s0128g00650.t01	Wine grape	extracellular	62.45	65.0
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	62.45	65.0
PGSC0003DMT400053423	Potato	extracellular	64.63	64.91
Solyc01g102900.2.1	Tomato	extracellular	64.63	64.91
HORVU7Hr1G102000.2	Barley	extracellular, vacuole	62.45	64.71
KRG94060	Soybean	extracellular	62.45	64.71
KRG94062	Soybean	extracellular	62.45	64.71
KRG94063	Soybean	extracellular	62.45	64.71
KRG94068	Soybean	extracellular	62.45	64.71
KRG94455	Soybean	extracellular	62.45	64.71
KRG94046	Soybean	extracellular	51.09	64.64
PGSC0003DMT400046992	Potato	extracellular	64.19	64.47
KRG94454	Soybean	extracellular	62.01	64.25
KRG94457	Soybean	extracellular	62.01	64.25
VIT_14s0060g02690.t01	Wine grape	extracellular	61.57	64.09
HORVU7Hr1G101990.1	Barley	extracellular	62.01	63.39
KRH07002	Soybean	extracellular	61.14	63.35
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	62.45	62.72
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	61.57	62.67
KRH34184	Soybean	extracellular	63.32	62.5
VIT_12s0059g00730.t01	Wine grape	extracellular	58.95	62.5
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	58.52	62.33
KRH07001	Soybean	extracellular	59.83	62.27
PGSC0003DMT400029687	Potato	extracellular	58.95	62.21
PGSC0003DMT400046891	Potato	extracellular	62.45	62.17
VIT_10s0003g05260.t01	Wine grape	extracellular	58.52	62.04
KRH11811	Soybean	extracellular	58.08	61.86
KRH42281	Soybean	extracellular	58.08	61.86
VIT_10s0003g05250.t01	Wine grape	extracellular	58.08	61.86
PGSC0003DMT400029689	Potato	extracellular	58.52	61.75
KRH07007	Soybean	extracellular	59.39	61.54
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	45.41	61.54
KRH58405	Soybean	vacuole	57.64	61.4
Solyc10g078840.1.1	Tomato	extracellular	58.08	61.29
KRG92598	Soybean	extracellular	62.01	61.21
KRH34183	Soybean	extracellular	52.84	61.11
PGSC0003DMT400046887	Potato	extracellular	61.14	60.87
VIT_12s0059g00720.t01	Wine grape	plastid	41.92	60.76
KRG94458	Soybean	extracellular	58.08	60.73
AT5G39120.1	Thale cress	extracellular	58.52	60.63
AT5G39150.1	Thale cress	extracellular	58.52	60.63
AT5G39180.1	Thale cress	extracellular	58.52	60.63
KRG94453	Soybean	extracellular	55.9	60.38
AT5G39160.1	Thale cress	extracellular, vacuole	58.52	60.36
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	57.64	60.27
CDY66959	Canola	extracellular	57.64	60.27
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.52	60.09
CDX99669	Canola	vacuole	58.52	60.09
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	58.52	60.09
CDY15957	Canola	vacuole	58.52	60.09
CDY36876	Canola	extracellular	57.64	60.0
KRH07008	Soybean	extracellular, plasma membrane, vacuole	56.33	60.0
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	58.08	59.91
AT5G39190.1	Thale cress	extracellular, vacuole	58.08	59.91
KRH36828	Soybean	extracellular	56.77	59.91
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	57.21	59.82
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.08	59.64
Bra039727.1-P	Field mustard	extracellular	57.21	59.55
CDY36875	Canola	extracellular, vacuole	57.21	59.55
CDY53728	Canola	extracellular	57.21	59.55
Solyc10g078850.1.1	Tomato	extracellular	54.59	59.52
Bra028225.1-P	Field mustard	extracellular, vacuole	57.64	59.46
CDX74487	Canola	extracellular, vacuole	57.64	59.46
CDY37880	Canola	extracellular	57.64	59.46
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	59.39	59.39
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	56.77	59.36
AT5G38930.1	Thale cress	extracellular	57.64	59.19
AT5G39130.1	Thale cress	extracellular	57.21	59.01
AT5G38960.1	Thale cress	extracellular	57.21	58.74
AT4G14630.1	Thale cress	extracellular	56.77	58.56
CDY69461	Canola	extracellular	48.47	58.12
Bra027979.1-P	Field mustard	extracellular	49.78	57.87
CDX95190	Canola	extracellular	49.78	57.87
KRG94061	Soybean	extracellular, plasma membrane, vacuole	51.09	56.8
VIT_14s0128g00970.t01	Wine grape	vacuole	63.32	56.64
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.33	56.33
CDY18834	Canola	extracellular, plasma membrane, vacuole	56.33	56.33
KRG94695	Soybean	nucleus	51.97	56.13
AT3G04200.1	Thale cress	extracellular, vacuole	55.46	55.95
AT5G38940.2	Thale cress	plastid	58.52	54.25
Bra028424.1-P	Field mustard	extracellular, vacuole	51.53	53.64
CDX67421	Canola	extracellular, vacuole	51.53	53.64
HORVU2Hr1G104240.1	Barley	extracellular	61.14	53.23
PGSC0003DMT400044231	Potato	extracellular	51.97	53.12
Solyc09g089990.2.1	Tomato	extracellular	51.97	53.12
HORVU2Hr1G104220.1	Barley	extracellular	61.57	52.42
AT3G04190.1	Thale cress	extracellular, vacuole	50.66	52.25
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	57.21	52.19
AT3G04180.1	Thale cress	extracellular, vacuole	49.34	50.9
AT3G04170.1	Thale cress	extracellular, vacuole	48.91	49.34
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.34	48.5
CDX99677	Canola	extracellular, vacuole	57.64	48.0
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	39.3	46.39
AT3G04150.2	Thale cress	extracellular, vacuole	48.03	45.45
Solyc09g090040.2.1	Tomato	extracellular	44.1	44.3
PGSC0003DMT400044224	Potato	extracellular	43.23	44.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	70.31	37.79
PGSC0003DMT400087849	Potato	extracellular	59.39	31.7

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS
EnsemblPlantsGene:HORVU3Hr1G002000	EnsemblPlants:HORVU3Hr1G002000.1	InterPro:IPR014710	UniProt:M0XC35	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF94	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295C7A6	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:+:4058547..4059618

Molecular Weight (calculated)

24759.8 Da

IEP (calculated)

6.509

GRAVY (calculated)

0.146

Length

229 amino acids

Sequence
(BLAST)

001: MASFSSSCFL LFAAILALVS WQAAASDPGP LQDFCVADNT SPVIVNGFVC KDPKAVTAED FFLAAKLDMP RDTKMSKVGS NVTLINVMKI AGLNTLGISL
101: ARIDYAPLGE NPPHTHPRAT EILTVLEGTL YVGFVTSNPE NKLFSKELRK GDVFVFPQGL IHFQFNPNPY KPAVAIAALS SQNPGAITIA NAVFGSKPMI
201: SDDVLAKAFQ VEKKTVDWLQ AQFWADNHN

Best Arabidopsis Sequence Match ( AT5G38960.1 )
(BLAST)

001: MNMKNLYLAI LYLLAASTLP FAIASDPSPL QDFCIGVNTP ANALFVNGKF CKDPKLVTAD DFYFSGLDKA RTTESSPVGS NVTTVNVNQI PGLNTLGISL
101: VRIDYGINGQ NPPHTHPRAT EILLVQEGTL FVGFFSSFPE NRLFNKTLNK GDVFVFPEGL IHFQVNIGKQ PAVAFASLSS QNPGVIIIGN TLFGSKPPID
201: PNVLAKAFQL DPKVIIQLQK KFG

Arabidopsis Description

Putative germin-like protein subfamily 1 member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.