Factsheet for PGSC0003DMT400087849

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029687	Potato	extracellular	47.79	94.47
PGSC0003DMT400029689	Potato	extracellular	47.55	94.01
Solyc10g078850.1.1	Tomato	extracellular	44.76	91.43
VIT_12s0059g00730.t01	Wine grape	extracellular	37.76	75.0
KRH42281	Soybean	extracellular	36.6	73.02
VIT_12s0059g00720.t01	Wine grape	plastid	26.57	72.15
KRH58405	Soybean	vacuole	35.43	70.7
KRH11811	Soybean	extracellular	35.2	70.23
KRH36828	Soybean	extracellular	35.2	69.59
TraesCSU01G006900.1	Wheat	extracellular	34.73	69.3
Os02t0491800-00	Rice	extracellular	35.9	69.06
TraesCS1A01G053000.1	Wheat	extracellular	34.5	68.84
TraesCS1A01G053100.1	Wheat	extracellular, vacuole	34.5	68.84
TraesCS1D01G054600.1	Wheat	extracellular	34.5	68.84
TraesCSU01G007100.1	Wheat	extracellular	34.5	68.84
EES05074	Sorghum	extracellular	34.73	68.66
EES05075	Sorghum	extracellular	34.73	68.66
Os02t0491600-00	Rice	extracellular	34.5	68.52
HORVU1Hr1G010600.1	Barley	extracellular, vacuole	34.27	68.37
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	34.27	68.37
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	34.27	68.37
TraesCS1B01G070100.1	Wheat	extracellular, vacuole	34.27	68.37
TraesCS1D01G054400.1	Wheat	extracellular	34.27	68.37
TraesCS2B01G083400.1	Wheat	extracellular, vacuole	28.21	68.36
EES05073	Sorghum	extracellular	34.5	68.2
TraesCS1A01G052600.1	Wheat	extracellular, vacuole	34.03	67.91
TraesCS1B01G070300.1	Wheat	extracellular, vacuole	34.03	67.91
TraesCS1A01G052700.1	Wheat	extracellular, vacuole	33.8	67.44
TraesCS2B01G387100.1	Wheat	extracellular, vacuole	33.8	67.44
EES05072	Sorghum	extracellular	34.03	67.28
GSMUA_Achr8P33400_001	Banana	extracellular	29.84	67.02
GSMUA_Achr8P33390_001	Banana	extracellular	33.8	66.51
Zm00001d053249_P001	Maize	extracellular, vacuole	33.8	66.51
TraesCS2D01G366500.1	Wheat	extracellular, vacuole	33.33	66.51
HORVU1Hr1G010740.1	Barley	extracellular	34.03	66.36
TraesCS6A01G033500.1	Wheat	extracellular	34.03	66.36
TraesCS6D01G039000.1	Wheat	extracellular	34.03	66.36
EES05077	Sorghum	extracellular, vacuole	33.57	66.36
GSMUA_Achr8P33360_001	Banana	extracellular	33.57	66.36
TraesCS2A01G370100.1	Wheat	extracellular, vacuole	29.14	65.79
GSMUA_Achr8P33370_001	Banana	extracellular	33.33	65.6
GSMUA_AchrUn_...	Banana	extracellular	33.33	65.6
Os02t0491700-00	Rice	extracellular	34.03	65.47
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	29.6	65.13
HORVU1Hr1G010710.1	Barley	vacuole	34.03	64.89
EES05076	Sorghum	extracellular	33.1	64.84
HORVU7Hr1G102000.2	Barley	extracellular, vacuole	33.33	64.71
TraesCS7B01G351600.1	Wheat	extracellular	32.87	64.68
GSMUA_Achr5P26710_001	Banana	cytosol	30.3	64.68
TraesCS7A01G451800.1	Wheat	extracellular	32.63	64.22
TraesCS7B01G351500.1	Wheat	extracellular	32.63	64.22
TraesCS7B01G351800.1	Wheat	extracellular	32.63	64.22
TraesCS7D01G440600.1	Wheat	extracellular	32.63	64.22
TraesCS7D01G440900.1	Wheat	extracellular	32.63	64.22
TraesCS7D01G441000.1	Wheat	extracellular	32.63	64.22
TraesCS6B01G047200.1	Wheat	extracellular	32.87	64.09
TraesCS1D01G054500.1	Wheat	extracellular, vacuole	27.51	63.78
TraesCS7D01G440700.1	Wheat	extracellular	32.4	63.76
TraesCS7A01G451700.1	Wheat	extracellular	32.17	63.3
TraesCS7A01G452000.1	Wheat	extracellular	32.17	63.3
TraesCS7B01G351700.1	Wheat	extracellular	32.17	63.3
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	31.93	63.13
HORVU7Hr1G101990.1	Barley	extracellular	32.87	62.95
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	31.7	62.67
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	31.7	62.67
HORVU1Hr1G010640.1	Barley	extracellular, vacuole	31.24	62.62
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	24.48	62.13
TraesCS7A01G473600.1	Wheat	extracellular	32.63	61.95
TraesCS3D01G010900.1	Wheat	extracellular	32.63	61.4
Zm00001d049438_P001	Maize	extracellular	31.7	61.26
TraesCS3A01G012500.1	Wheat	extracellular	32.17	61.06
TraesCS3D01G011100.1	Wheat	extracellular	32.17	61.06
TraesCS7A01G473400.1	Wheat	extracellular	32.17	61.06
TraesCS7B01G374800.1	Wheat	extracellular	32.17	61.06
TraesCS7B01G374900.1	Wheat	extracellular	32.17	61.06
TraesCS7D01G460500.1	Wheat	extracellular	32.17	61.06
Os08t0189600-01	Rice	extracellular	31.93	60.89
Os08t0188900-01	Rice	plastid	31.0	60.73
Os08t0189100-01	Rice	extracellular	31.24	60.63
OQU80011	Sorghum	extracellular	32.17	60.53
PGSC0003DMT400040093	Potato	extracellular	32.17	60.53
PGSC0003DMT400053423	Potato	extracellular	32.17	60.53
Zm00001d049419_P001	Maize	extracellular	32.17	60.53
Zm00001d000006_P001	Maize	extracellular	31.7	60.44
EES14666	Sorghum	extracellular	31.93	60.35
Os08t0189700-01	Rice	extracellular	31.47	60.27
Os08t0189850-01	Rice	extracellular	31.47	60.27
EES13474	Sorghum	extracellular	31.93	60.09
KXG24637	Sorghum	extracellular	31.93	60.09
OQU80014	Sorghum	extracellular	31.93	60.09
OQU80017	Sorghum	extracellular	31.93	60.09
OQU80021	Sorghum	extracellular	31.93	60.09
OQU80024	Sorghum	extracellular	31.93	60.09
Zm00001d049418_P001	Maize	extracellular	31.93	60.09
Os08t0189500-01	Rice	extracellular	31.47	60.0
TraesCS3A01G012600.1	Wheat	extracellular	31.93	59.83
TraesCS3D01G010800.1	Wheat	extracellular	31.93	59.83
Os08t0189900-01	Rice	extracellular	31.24	59.82
TraesCS3D01G011000.1	Wheat	extracellular	31.47	59.73
EES13478	Sorghum	extracellular	31.7	59.65
Zm00001d049427_P001	Maize	extracellular, plastid	31.7	59.65
Os12t0155000-01	Rice	cytosol, extracellular, vacuole	27.04	59.49
HORVU3Hr1G002000.1	Barley	extracellular	31.7	59.39
TraesCSU01G128000.1	Wheat	extracellular	31.7	59.39
Zm00001d049437_P001	Maize	extracellular	31.47	59.21
Os12t0154700-01	Rice	extracellular	31.47	58.95
Os12t0154800-01	Rice	extracellular	31.47	58.95
TraesCS4B01G378000.1	Wheat	extracellular	31.47	58.95
TraesCSU01G128700.1	Wheat	golgi	31.47	58.95
TraesCSU01G145300.1	Wheat	extracellular	31.47	58.95
TraesCSU01G145700.1	Wheat	extracellular	31.47	58.95
TraesCSU01G161300.1	Wheat	extracellular	31.47	58.95
Zm00001d049428_P001	Maize	extracellular, plastid	31.47	58.95
Os08t0190100-01	Rice	extracellular	30.77	58.93
TraesCS3A01G012400.1	Wheat	extracellular	31.0	58.85
Zm00001d049420_P001	Maize	extracellular	31.24	58.77
Zm00001d049431_P001	Maize	extracellular, plastid	31.24	58.77
Zm00001d049432_P001	Maize	extracellular, plastid	31.24	58.77
Zm00001d049433_P001	Maize	extracellular	31.24	58.77
Zm00001d049436_P001	Maize	extracellular, plastid	31.24	58.77
TraesCS4B01G376900.1	Wheat	extracellular	30.77	58.67
TraesCS5A01G543600.1	Wheat	extracellular	30.77	58.67
OQU80013	Sorghum	cytosol, extracellular, peroxisome	27.04	58.59
TraesCS4B01G377100.1	Wheat	extracellular	31.24	58.52
TraesCS4B01G377200.1	Wheat	extracellular	31.24	58.52
TraesCS4B01G377300.1	Wheat	extracellular	31.24	58.52
TraesCS4B01G377400.1	Wheat	extracellular	31.24	58.52
TraesCS4B01G377800.1	Wheat	extracellular	31.24	58.52
TraesCS5A01G543900.1	Wheat	extracellular	31.24	58.52
TraesCS5A01G544200.1	Wheat	extracellular	31.24	58.52
TraesCS5A01G545200.1	Wheat	extracellular	31.24	58.52
TraesCS5A01G545400.1	Wheat	extracellular	31.24	58.52
TraesCSU01G127900.1	Wheat	extracellular	31.24	58.52
TraesCSU01G128100.1	Wheat	extracellular	31.24	58.52
TraesCSU01G128400.1	Wheat	extracellular	31.24	58.52
TraesCSU01G128500.1	Wheat	extracellular	31.24	58.52
TraesCSU01G128600.1	Wheat	extracellular	31.24	58.52
TraesCSU01G128800.1	Wheat	extracellular	31.24	58.52
TraesCSU01G145500.1	Wheat	extracellular	31.24	58.52
TraesCSU01G145600.1	Wheat	extracellular	31.24	58.52
TraesCSU01G151900.1	Wheat	extracellular	31.24	58.52
TraesCSU01G152000.1	Wheat	extracellular	31.24	58.52
TraesCSU01G222000.1	Wheat	extracellular	31.24	58.52
TraesCSU01G238600.1	Wheat	extracellular	31.24	58.52
TraesCSU01G253400.1	Wheat	extracellular	31.24	58.52
Zm00001d049421_P001	Maize	extracellular, plastid	31.24	58.52
Zm00001d049423_P001	Maize	extracellular	31.24	58.52
Zm00001d049435_P001	Maize	extracellular	31.24	58.52
Os08t0189400-01	Rice	extracellular	30.54	58.48
HORVU0Hr1G009450.1	Barley	extracellular	31.47	58.44
Zm00001d000018_P001	Maize	extracellular	30.77	58.41
EES13468	Sorghum	extracellular	31.0	58.33
EES13470	Sorghum	extracellular	31.0	58.33
OQU80018	Sorghum	extracellular	31.0	58.33
OQU80022	Sorghum	extracellular	31.0	58.33
Zm00001d049430_P001	Maize	extracellular, plastid	31.0	58.33
Zm00001d049426_P001	Maize	plastid	21.68	58.12
TraesCS4B01G377000.1	Wheat	extracellular	31.0	58.08
TraesCS4B01G377500.1	Wheat	extracellular	31.0	58.08
TraesCS5A01G543700.1	Wheat	extracellular	31.0	58.08
TraesCS5A01G544400.1	Wheat	extracellular	31.0	58.08
TraesCSU01G128300.1	Wheat	extracellular	31.0	58.08
TraesCSU01G150700.1	Wheat	extracellular	31.0	58.08
EES13464	Sorghum	extracellular	30.54	57.96
PGSC0003DMT400046992	Potato	extracellular	30.77	57.89
HORVU0Hr1G009460.4	Barley	extracellular	30.77	57.64
TraesCS4B01G377900.1	Wheat	extracellular	30.77	57.64
TraesCS5A01G544500.1	Wheat	extracellular	30.77	57.64
TraesCS4B01G376700.1	Wheat	extracellular	17.02	57.48
TraesCSU01G245800.1	Wheat	extracellular	29.84	57.4
Zm00001d000012_P001	Maize	extracellular	30.3	57.27
HORVU4Hr1G090120.1	Barley	extracellular	30.54	57.21
Os12t0154900-00	Rice	extracellular	30.54	57.21
TraesCS5A01G543800.1	Wheat	extracellular	30.54	57.21
TraesCS5A01G544000.1	Wheat	extracellular	30.54	57.21
Zm00001d000017_P001	Maize	extracellular	30.07	57.08
PGSC0003DMT400046891	Potato	extracellular	30.3	56.52
GSMUA_Achr5P26700_001	Banana	extracellular	23.54	56.42
TraesCS4B01G377700.1	Wheat	extracellular	28.21	56.02
TraesCS5B01G048500.1	Wheat	extracellular	29.37	55.75
TraesCS5D01G054300.1	Wheat	extracellular	29.37	55.75
PGSC0003DMT400046887	Potato	extracellular	29.84	55.65
Os08t0189300-01	Rice	extracellular	28.9	55.36
Os08t0231400-01	Rice	extracellular	28.9	55.36
HORVU3Hr1G001990.1	Barley	extracellular, plastid, vacuole	32.63	55.34
Os08t0189200-01	Rice	extracellular	28.9	55.11
TraesCS1B01G069900.1	Wheat	extracellular	34.03	55.09
TraesCSU01G152900.1	Wheat	extracellular	29.37	55.02
HORVU0Hr1G009470.2	Barley	plastid	31.0	54.96
EES13475	Sorghum	extracellular	27.51	54.88
HORVU4Hr1G090130.1	Barley	endoplasmic reticulum, extracellular, plastid	31.47	54.88
TraesCS1B01G069600.1	Wheat	extracellular	33.8	54.72
HORVU5Hr1G010880.2	Barley	extracellular	29.14	54.59
TraesCS3B01G075600.1	Wheat	extracellular	28.67	54.19
TraesCS3B01G075700.1	Wheat	endoplasmic reticulum, extracellular	28.67	54.19
EES11809	Sorghum	extracellular	28.9	54.15
Zm00001d049439_P001	Maize	cytosol, peroxisome, plastid	17.95	53.85
Zm00001d025059_P001	Maize	extracellular	28.44	53.74
Zm00001d004401_P001	Maize	extracellular	28.21	53.54
TraesCS5A01G044300.1	Wheat	extracellular	29.14	53.19
HORVU3Hr1G011990.3	Barley	extracellular	28.21	52.16
TraesCS7A01G386800.1	Wheat	endoplasmic reticulum, extracellular	28.44	51.91
TraesCS7B01G289600.1	Wheat	endoplasmic reticulum, extracellular	28.44	51.91
TraesCS7D01G383300.1	Wheat	extracellular	28.44	51.91
TraesCSU01G152800.1	Wheat	plastid	31.24	51.54
HORVU7Hr1G091800.1	Barley	endoplasmic reticulum, extracellular, plastid	27.97	51.06
GSMUA_Achr9P30640_001	Banana	extracellular, vacuole	26.81	49.15
PGSC0003DMT400044231	Potato	extracellular	25.41	48.66
GSMUA_Achr8P33380_001	Banana	extracellular	25.41	48.44
HORVU2Hr1G104240.1	Barley	extracellular	29.37	47.91
TraesCS2A01G459900.1	Wheat	extracellular, vacuole	29.37	47.91
TraesCS2B01G481600.1	Wheat	extracellular, vacuole	29.37	47.91
HORVU4Hr1G090190.4	Barley	extracellular	31.24	47.86
TraesCS4B01G378200.1	Wheat	plastid	31.24	47.86
TraesCS4B01G378400.1	Wheat	plastid	30.77	47.65
TraesCS2D01G460200.1	Wheat	extracellular, vacuole	29.14	47.53
HORVU2Hr1G104220.1	Barley	extracellular	29.37	46.84
EES12867	Sorghum	extracellular, vacuole	28.67	46.77
TraesCS2B01G481500.1	Wheat	vacuole	29.37	46.67
TraesCS2D01G460100.1	Wheat	vacuole	29.37	46.67
TraesCS2A01G459800.1	Wheat	vacuole	29.14	46.3
Zm00001d002295_P001	Maize	extracellular	28.21	46.01
PGSC0003DMT400044224	Potato	extracellular	22.14	42.22
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	31.7	31.92

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS
InterPro:IPR014710	UniProt:M1DEP0	PFAM:PF00190	EnsemblPlantsGene:PGSC0003DMG400037420	PGSC:PGSC0003DMG400037420	EnsemblPlants:PGSC0003DMT400087849
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF41	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296A274	SEG:seg

Description

Rhicadhesin receptor [Source:PGSC_GENE;Acc:PGSC0003DMG400037420]

Coordinates

chr10:-:58876226..58879838

Molecular Weight (calculated)

45495.9 Da

IEP (calculated)

6.938

GRAVY (calculated)

0.371

Length

429 amino acids

Sequence
(BLAST)

001: MAKHFLLLNL IAVLSFCCVV LAFEPSPMQD FCVADPISTV KVNGLSCKDP KSVIAEDFFF SGLHLAGNTS NTFGSKVTPA NVAQIPGLNT LGISLARVDY
101: APWGINPPHT HPRATEIVTV LEGSLQVGFV TSNPENHHIT KVLKKGDVFV FPIGLVHYQR NVGNGNAVAI AALSSQNPGV ISIANAVFGS EPAIATDILA
201: KAFQVDATVV VLEMAKHFLL LNLIVVSFCC AVLAFESSPM QDFCVADPAS TVKVNGLACK DPKSVISEDF FFSGLHLAGN TSNTFGSKVT RVNATQIPGL
301: NTLGISLARV DYAPWGVNPP HTHPRATEIF TVLEGSLQVG FVTSNPENRL ITKVLKKGDV FVFPIGLVHY QRNVGYGNAV AVAALSSQNP GVISIANAVF
401: GSEPAIATDI LAKAFQVDET VVAQIQSKF

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.