Factsheet for TraesCS6D01G039000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G047200.1	Wheat	extracellular	95.91	95.91
TraesCS6A01G033500.1	Wheat	extracellular	94.55	94.55
TraesCS2B01G083400.1	Wheat	extracellular, vacuole	73.64	91.53
TraesCS7D01G440900.1	Wheat	extracellular	85.0	85.78
TraesCS7D01G441000.1	Wheat	extracellular	85.0	85.78
TraesCS7D01G440700.1	Wheat	extracellular	84.55	85.32
TraesCS7D01G440600.1	Wheat	extracellular	84.09	84.86
Zm00001d053249_P001	Maize	extracellular, vacuole	74.55	75.23
EES05077	Sorghum	extracellular, vacuole	74.09	75.12
Os02t0491800-00	Rice	extracellular	75.91	74.89
TraesCS1D01G054600.1	Wheat	extracellular	70.91	72.56
TraesCS1D01G054400.1	Wheat	extracellular	70.45	72.09
VIT_14s0128g01040.t01	Wine grape	peroxisome	39.55	70.73
EES05076	Sorghum	extracellular	69.09	69.41
TraesCS1D01G054500.1	Wheat	extracellular, vacuole	58.18	69.19
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	64.09	68.78
TraesCS2D01G366500.1	Wheat	extracellular, vacuole	66.82	68.37
VIT_14s0006g02380.t01	Wine grape	extracellular	67.27	67.89
VIT_14s0006g02430.t01	Wine grape	extracellular	67.27	67.89
PGSC0003DMT400029687	Potato	extracellular	66.82	67.74
PGSC0003DMT400029689	Potato	extracellular	66.82	67.74
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	67.73	67.42
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	67.73	67.42
Solyc10g078840.1.1	Tomato	extracellular	66.36	67.28
VIT_14s0060g02700.t01	Wine grape	cytosol	64.55	66.98
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	67.27	66.97
VIT_14s0006g02350.t01	Wine grape	extracellular	67.27	66.97
VIT_14s0006g02370.t01	Wine grape	extracellular	67.27	66.97
VIT_14s0006g02390.t01	Wine grape	extracellular	67.27	66.97
VIT_14s0060g02730.t01	Wine grape	peroxisome	61.82	65.7
TraesCS3D01G010900.1	Wheat	extracellular	67.73	65.35
GSMUA_Achr8P33360_001	Banana	extracellular	64.09	64.98
GSMUA_Achr8P33400_001	Banana	extracellular	56.36	64.92
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	63.18	64.65
TraesCS3D01G011100.1	Wheat	extracellular	66.36	64.6
VIT_14s0128g00650.t01	Wine grape	extracellular	64.55	64.55
KRH36828	Soybean	extracellular	63.64	64.52
VIT_16s0013g00010.t01	Wine grape	extracellular	65.91	64.44
VIT_16s0013g00060.t01	Wine grape	extracellular	65.91	64.44
VIT_12s0059g00730.t01	Wine grape	extracellular	63.18	64.35
GSMUA_AchrUn_...	Banana	extracellular	63.64	64.22
KRH11811	Soybean	extracellular	62.73	64.19
TraesCS7D01G460500.1	Wheat	extracellular	65.91	64.16
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	64.09	64.09
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	64.09	64.09
VIT_16s0039g02860.t01	Wine grape	extracellular	65.45	64.0
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	57.27	63.96
GSMUA_Achr8P33370_001	Banana	extracellular	63.18	63.76
TraesCS3D01G010800.1	Wheat	extracellular	66.36	63.76
KRH42281	Soybean	extracellular	62.27	63.72
TraesCS3D01G011000.1	Wheat	extracellular	65.45	63.72
VIT_14s0060g02690.t01	Wine grape	extracellular	63.64	63.64
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	63.64	63.64
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	63.64	63.64
VIT_16s0039g02920.t01	Wine grape	plastid	53.18	63.59
Solyc10g078850.1.1	Tomato	extracellular	60.45	63.33
GSMUA_Achr8P33390_001	Banana	extracellular	62.73	63.3
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	63.18	63.18
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	63.18	63.18
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	63.18	63.18
VIT_10s0003g05250.t01	Wine grape	extracellular	61.36	62.79
VIT_12s0059g00720.t01	Wine grape	plastid	45.0	62.66
KRG92599	Soybean	extracellular	62.73	62.16
VIT_10s0003g05260.t01	Wine grape	extracellular	60.91	62.04
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	62.27	61.99
KRH58405	Soybean	vacuole	60.45	61.86
PGSC0003DMT400053423	Potato	extracellular	64.09	61.84
Solyc01g102900.2.1	Tomato	extracellular	64.09	61.84
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	47.27	61.54
PGSC0003DMT400040093	Potato	extracellular	63.64	61.4
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	63.18	60.96
KRH34184	Soybean	extracellular	64.09	60.78
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	61.82	60.44
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	61.82	60.44
KRG92598	Soybean	extracellular	63.64	60.34
KRH07003	Soybean	extracellular	60.45	60.18
PGSC0003DMT400046992	Potato	extracellular	61.82	59.65
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.0	59.19
CDX99669	Canola	vacuole	60.0	59.19
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	60.0	59.19
CDY15957	Canola	vacuole	60.0	59.19
KRH07002	Soybean	extracellular	59.09	58.82
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	59.55	58.74
CDY36876	Canola	extracellular	58.64	58.64
AT4G14630.1	Thale cress	extracellular	59.09	58.56
CDY66959	Canola	extracellular	58.18	58.45
KRG94060	Soybean	extracellular	58.64	58.37
KRG94062	Soybean	extracellular	58.64	58.37
KRG94063	Soybean	extracellular	58.64	58.37
KRG94068	Soybean	extracellular	58.64	58.37
KRG94455	Soybean	extracellular	58.64	58.37
PGSC0003DMT400046891	Potato	extracellular	60.91	58.26
Bra039727.1-P	Field mustard	extracellular	58.18	58.18
CDY36875	Canola	extracellular, vacuole	58.18	58.18
CDY53728	Canola	extracellular	58.18	58.18
AT5G39160.1	Thale cress	extracellular, vacuole	58.64	58.11
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	60.45	58.08
KRG94046	Soybean	extracellular	47.73	58.01
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	57.73	57.99
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	57.73	57.99
KRG94454	Soybean	extracellular	58.18	57.92
KRG94457	Soybean	extracellular	58.18	57.92
AT5G38930.1	Thale cress	extracellular	58.64	57.85
AT5G39130.1	Thale cress	extracellular	58.18	57.66
AT5G39190.1	Thale cress	extracellular, vacuole	58.18	57.66
KRH34183	Soybean	extracellular	51.82	57.58
KRH07007	Soybean	extracellular	57.73	57.47
KRH07001	Soybean	extracellular	57.27	57.27
KRH07008	Soybean	extracellular, plasma membrane, vacuole	55.91	57.21
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	56.82	57.08
AT5G39150.1	Thale cress	extracellular	57.27	57.01
AT5G39180.1	Thale cress	extracellular	57.27	57.01
PGSC0003DMT400046887	Potato	extracellular	59.55	56.96
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	57.27	56.76
Bra028225.1-P	Field mustard	extracellular, vacuole	57.27	56.76
CDX74487	Canola	extracellular, vacuole	57.27	56.76
CDY37880	Canola	extracellular	57.27	56.76
TraesCS5D01G054300.1	Wheat	extracellular	58.18	56.64
KRG94458	Soybean	extracellular	56.36	56.62
AT5G39120.1	Thale cress	extracellular	56.82	56.56
CDY69461	Canola	extracellular	49.09	56.54
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	58.64	56.33
CDY18834	Canola	extracellular, plasma membrane, vacuole	58.64	56.33
KRG94453	Soybean	extracellular	54.09	56.13
KRG94695	Soybean	nucleus	54.09	56.13
AT5G38960.1	Thale cress	extracellular	55.91	55.16
VIT_14s0128g00970.t01	Wine grape	vacuole	63.64	54.69
Bra027979.1-P	Field mustard	extracellular	48.64	54.31
CDX95190	Canola	extracellular	48.64	54.31
KRG94061	Soybean	extracellular, plasma membrane, vacuole	49.55	52.91
TraesCS2D01G460200.1	Wheat	extracellular, vacuole	63.18	52.85
TraesCS7D01G383300.1	Wheat	extracellular	56.36	52.77
AT5G38940.2	Thale cress	plastid	59.09	52.63
AT3G04200.1	Thale cress	extracellular, vacuole	53.64	51.98
TraesCS2D01G460100.1	Wheat	vacuole	63.18	51.48
AT3G04190.1	Thale cress	extracellular, vacuole	51.36	50.9
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	57.27	50.2
AT3G04180.1	Thale cress	extracellular, vacuole	49.55	49.1
Bra028424.1-P	Field mustard	extracellular, vacuole	48.64	48.64
CDX67421	Canola	extracellular, vacuole	48.64	48.64
PGSC0003DMT400044231	Potato	extracellular	48.64	47.77
Solyc09g089990.2.1	Tomato	extracellular	48.18	47.32
AT3G04170.1	Thale cress	extracellular, vacuole	48.64	47.14
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.09	46.35
GSMUA_Achr8P33380_001	Banana	extracellular	47.27	46.22
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	40.45	45.88
CDX99677	Canola	extracellular, vacuole	56.82	45.45
AT3G04150.2	Thale cress	extracellular, vacuole	47.73	43.39
Solyc09g090040.2.1	Tomato	extracellular	44.55	42.98
PGSC0003DMT400044224	Potato	extracellular	43.64	42.67
PGSC0003DMT400087849	Potato	extracellular	66.36	34.03

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PFscan:PS51257	PANTHER:PTHR31238	PANTHER:PTHR31238:SF90	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6D01G039000	EnsemblPlants:TraesCS6D01G039000.1	SEG:seg

Description

No Description!

Coordinates

chr6D:-:16184807..16185567

Molecular Weight (calculated)

23281.9 Da

IEP (calculated)

6.711

GRAVY (calculated)

0.253

Length

220 amino acids

Sequence
(BLAST)

001: MVAIRVLLLA GALLAFACSQ HGVAASDPSL LQDFCVADKV SQVRVNGLPC KAANEVVAED FFFSGLHMAG NTANKQGSAV TAVNVAQISG LNTMGISLVR
101: IDYAPNGLNP PHTHPRSTEI LTVLEGCLHV GFVTSNPENR HFTKVLAKGD VFVFPKGLVH YQFNNGNTHA VAIAALSSQN PGVITVANAV FGSEPAISDD
201: VITKAFQVEK NTVDWIQAQF

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.