Factsheet for TraesCS1D01G054500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

mitochondrion 1
vacuole 4
extracellular 4
endoplasmic reticulum 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G052600.1	Wheat	extracellular, vacuole	93.51	80.47
TraesCS1D01G054600.1	Wheat	extracellular	93.51	80.47
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	92.97	80.0
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	92.97	80.0
TraesCS1D01G054400.1	Wheat	extracellular	92.43	79.53
TraesCS1A01G052700.1	Wheat	extracellular, vacuole	91.89	79.07
HORVU1Hr1G010740.1	Barley	extracellular	90.81	76.36
HORVU1Hr1G010710.1	Barley	vacuole	89.19	73.33
TraesCS2D01G366500.1	Wheat	extracellular, vacuole	81.62	70.23
HORVU1Hr1G010640.1	Barley	extracellular, vacuole	80.54	69.63
Os02t0491600-00	Rice	extracellular	77.3	66.2
TraesCS7D01G440900.1	Wheat	extracellular	69.73	59.17
TraesCS7D01G441000.1	Wheat	extracellular	69.73	59.17
GSMUA_Achr8P33400_001	Banana	extracellular	60.54	58.64
TraesCS6D01G039000.1	Wheat	extracellular	69.19	58.18
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	63.78	57.56
TraesCS7D01G440600.1	Wheat	extracellular	67.57	57.34
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	66.49	57.21
GSMUA_Achr8P33360_001	Banana	extracellular	67.03	57.14
VIT_14s0006g02430.t01	Wine grape	extracellular	67.03	56.88
GSMUA_Achr8P33390_001	Banana	extracellular	66.49	56.42
GSMUA_AchrUn_...	Banana	extracellular	66.49	56.42
VIT_14s0006g02380.t01	Wine grape	extracellular	66.49	56.42
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	67.03	56.11
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	67.03	56.11
GSMUA_Achr8P33370_001	Banana	extracellular	65.95	55.96
TraesCS7D01G440700.1	Wheat	extracellular	65.95	55.96
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	66.49	55.66
VIT_14s0006g02350.t01	Wine grape	extracellular	66.49	55.66
VIT_14s0006g02370.t01	Wine grape	extracellular	66.49	55.66
VIT_14s0006g02390.t01	Wine grape	extracellular	66.49	55.66
VIT_16s0013g00010.t01	Wine grape	extracellular	67.03	55.11
PGSC0003DMT400029687	Potato	extracellular	64.32	54.84
VIT_16s0013g00060.t01	Wine grape	extracellular	66.49	54.67
VIT_10s0003g05260.t01	Wine grape	extracellular	63.78	54.63
VIT_10s0003g05250.t01	Wine grape	extracellular	63.24	54.42
Solyc10g078840.1.1	Tomato	extracellular	63.78	54.38
VIT_16s0039g02860.t01	Wine grape	extracellular	65.95	54.22
TraesCS3D01G010800.1	Wheat	extracellular	67.03	54.15
KRG92599	Soybean	extracellular	64.86	54.05
TraesCS3D01G011000.1	Wheat	extracellular	65.95	53.98
PGSC0003DMT400029689	Potato	extracellular	63.24	53.92
VIT_16s0039g02920.t01	Wine grape	plastid	53.51	53.8
VIT_14s0060g02700.t01	Wine grape	cytosol	61.62	53.77
VIT_14s0060g02730.t01	Wine grape	peroxisome	60.0	53.62
VIT_12s0059g00730.t01	Wine grape	extracellular	62.16	53.24
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	63.24	53.18
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	63.24	53.18
TraesCS7D01G460500.1	Wheat	extracellular	64.86	53.1
TraesCS3D01G010900.1	Wheat	extracellular	65.41	53.07
VIT_14s0060g02690.t01	Wine grape	extracellular	62.7	52.73
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	62.7	52.73
KRH36828	Soybean	extracellular	61.62	52.53
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	62.16	52.27
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	62.16	52.27
Solyc10g078850.1.1	Tomato	extracellular	58.92	51.9
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	61.62	51.82
TraesCS3D01G011100.1	Wheat	extracellular	63.24	51.77
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	61.08	51.36
KRH11811	Soybean	extracellular	59.46	51.16
VIT_14s0128g00650.t01	Wine grape	extracellular	60.54	50.91
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	62.7	50.88
KRG92598	Soybean	extracellular	63.78	50.86
KRH42281	Soybean	extracellular	58.92	50.7
AT5G39150.1	Thale cress	extracellular	60.54	50.68
AT5G39180.1	Thale cress	extracellular	60.54	50.68
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	60.54	50.68
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	61.08	50.67
CDX99669	Canola	vacuole	61.08	50.67
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	61.08	50.67
CDY15957	Canola	vacuole	61.08	50.67
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	61.62	50.67
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	60.54	50.45
KRH34184	Soybean	extracellular	63.24	50.43
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	59.46	50.23
AT5G39120.1	Thale cress	extracellular	60.0	50.23
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.54	50.22
PGSC0003DMT400053423	Potato	extracellular	61.62	50.0
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.92	49.77
Solyc01g102900.2.1	Tomato	extracellular	61.08	49.56
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	58.38	49.32
KRH58405	Soybean	vacuole	57.3	49.3
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	52.43	49.24
PGSC0003DMT400046891	Potato	extracellular	61.08	49.13
PGSC0003DMT400040093	Potato	extracellular	60.54	49.12
KRH34183	Soybean	extracellular	52.43	48.99
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	60.0	48.47
PGSC0003DMT400046992	Potato	extracellular	59.46	48.25
AT5G39130.1	Thale cress	extracellular	57.84	48.2
AT5G39160.1	Thale cress	extracellular, vacuole	57.84	48.2
VIT_12s0059g00720.t01	Wine grape	plastid	41.08	48.1
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	58.38	48.0
AT5G38960.1	Thale cress	extracellular	57.84	47.98
VIT_14s0128g01040.t01	Wine grape	peroxisome	31.89	47.97
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	43.78	47.93
KRH07008	Soybean	extracellular, plasma membrane, vacuole	55.68	47.91
AT5G39190.1	Thale cress	extracellular, vacuole	57.3	47.75
Bra028225.1-P	Field mustard	extracellular, vacuole	57.3	47.75
CDX74487	Canola	extracellular, vacuole	57.3	47.75
CDY37880	Canola	extracellular	57.3	47.75
CDY66959	Canola	extracellular	56.22	47.49
PGSC0003DMT400046887	Potato	extracellular	58.92	47.39
Bra039727.1-P	Field mustard	extracellular	56.22	47.27
CDY36875	Canola	extracellular, vacuole	56.22	47.27
CDY53728	Canola	extracellular	56.22	47.27
AT5G38930.1	Thale cress	extracellular	56.76	47.09
KRG94455	Soybean	extracellular	56.22	47.06
KRH07003	Soybean	extracellular	56.22	47.06
KRH07007	Soybean	extracellular	56.22	47.06
TraesCS5D01G054300.1	Wheat	extracellular	57.3	46.9
CDY36876	Canola	extracellular	55.68	46.82
KRH07001	Soybean	extracellular	55.68	46.82
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.84	46.72
CDY18834	Canola	extracellular, plasma membrane, vacuole	57.84	46.72
KRG94060	Soybean	extracellular	55.68	46.61
KRG94062	Soybean	extracellular	55.68	46.61
KRG94063	Soybean	extracellular	55.68	46.61
KRG94068	Soybean	extracellular	55.68	46.61
KRG94454	Soybean	extracellular	55.68	46.61
KRG94457	Soybean	extracellular	55.68	46.61
AT4G14630.1	Thale cress	extracellular	55.68	46.4
KRH07002	Soybean	extracellular	55.14	46.15
KRG94695	Soybean	nucleus	51.89	45.28
TraesCS7D01G383300.1	Wheat	extracellular	56.76	44.68
CDY69461	Canola	extracellular	45.95	44.5
AT3G04200.1	Thale cress	extracellular, vacuole	54.59	44.49
KRG94458	Soybean	extracellular	52.43	44.29
VIT_14s0128g00970.t01	Wine grape	vacuole	61.08	44.14
AT3G04190.1	Thale cress	extracellular, vacuole	51.89	43.24
KRG94046	Soybean	extracellular	42.16	43.09
KRG94453	Soybean	extracellular	49.19	42.92
AT5G38940.2	Thale cress	plastid	57.3	42.91
TraesCS2D01G460200.1	Wheat	extracellular, vacuole	60.54	42.59
Bra027979.1-P	Field mustard	extracellular	44.86	42.13
CDX95190	Canola	extracellular	44.86	42.13
GSMUA_Achr8P33380_001	Banana	extracellular	50.81	41.78
AT3G04180.1	Thale cress	extracellular, vacuole	49.73	41.44
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	56.22	41.43
Bra028424.1-P	Field mustard	extracellular, vacuole	49.19	41.36
CDX67421	Canola	extracellular, vacuole	49.19	41.36
TraesCS2D01G460100.1	Wheat	vacuole	60.0	41.11
PGSC0003DMT400044231	Potato	extracellular	49.73	41.07
AT3G04170.1	Thale cress	extracellular, vacuole	50.27	40.97
Solyc09g089990.2.1	Tomato	extracellular	49.19	40.62
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	50.81	40.34
KRG94061	Soybean	extracellular, plasma membrane, vacuole	43.24	38.84
CDX99677	Canola	extracellular, vacuole	56.76	38.18
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	40.0	38.14
AT3G04150.2	Thale cress	extracellular, vacuole	49.73	38.02
PGSC0003DMT400044224	Potato	extracellular	45.41	37.33
Solyc09g090040.2.1	Tomato	extracellular	45.41	36.84
PGSC0003DMT400087849	Potato	extracellular	63.78	27.51

Protein Annotations

EnsemblPlants:TraesCS1D01G054500.1	EnsemblPlantsGene:TraesCS1D01G054500	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
PANTHER:PTHR31238	PANTHER:PTHR31238:SF90	PFAM:PF00190	ScanProsite:PS00725	SEG:seg	SignalP:SignalP-noTM
SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1D:-:35886292..35900512

Molecular Weight (calculated)

19615.5 Da

IEP (calculated)

7.054

GRAVY (calculated)

0.220

Length

185 amino acids

Sequence
(BLAST)

001: MASKFFLLAL LAFSASRALA SDPGQLQDFC VADKTSQVFV NGFACKDPKT TVVEDFYFSG LHMAGNTSNK QGSIVTAVNV AQIAGLNTLG VSLARIDYAP
101: YGQNPPHLHP RATEIPTGAI PVVIHFQVNI GNNEAIAIAA LSSKNPGVIT IANAVFGSKQ TISDDILAKA FQVDKNIIDH IQAQF

Best Arabidopsis Sequence Match ( AT5G38910.2 )
(BLAST)

001: MKSFSFLAVL SILAITLSLS KASDPSSLQD FCVGVNTPAD GVFVNGKFCK DPKLVTVEDF FFTGLHEARP PNPKTGSNVT AVNVNNLPGL NTLGISLVRI
101: DYGVYGQNPP HTHPRASEGL IHFQVNVGKY PAVAFAGLSS QNPGVITIAD TVFGSNPQID PSFLASAFQV DPKIVMDLQT KFIKP

Arabidopsis Description

Putative germin-like protein subfamily 1 member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMB0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.