Factsheet for PGSC0003DMT400029689

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029687	Potato	extracellular	93.09	93.09
Solyc10g078850.1.1	Tomato	extracellular	83.87	86.67
VIT_12s0059g00730.t01	Wine grape	extracellular	72.35	72.69
KRH42281	Soybean	extracellular	70.97	71.63
KRH11811	Soybean	extracellular	68.66	69.3
VIT_12s0059g00720.t01	Wine grape	plastid	50.23	68.99
TraesCS2B01G083400.1	Wheat	extracellular, vacuole	56.22	68.93
KRH58405	Soybean	vacuole	68.2	68.84
KRH36828	Soybean	extracellular	68.66	68.66
TraesCSU01G006900.1	Wheat	extracellular	67.74	68.37
TraesCS1A01G053100.1	Wheat	extracellular, vacuole	67.28	67.91
EES05075	Sorghum	extracellular	67.74	67.74
Os02t0491800-00	Rice	extracellular	69.59	67.71
TraesCS1D01G054400.1	Wheat	extracellular	66.82	67.44
TraesCS1D01G054600.1	Wheat	extracellular	66.82	67.44
EES05073	Sorghum	extracellular	67.28	67.28
EES05074	Sorghum	extracellular	67.28	67.28
TraesCS6A01G033500.1	Wheat	extracellular	68.2	67.27
Os02t0491600-00	Rice	extracellular	66.82	67.13
TraesCS1A01G052600.1	Wheat	extracellular, vacuole	66.36	66.98
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	66.36	66.98
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	66.36	66.98
TraesCS1B01G070300.1	Wheat	extracellular, vacuole	66.36	66.98
TraesCS6D01G039000.1	Wheat	extracellular	67.74	66.82
Zm00001d053249_P001	Maize	extracellular, vacuole	66.82	66.51
HORVU1Hr1G010600.1	Barley	extracellular, vacuole	65.9	66.51
TraesCS1A01G052700.1	Wheat	extracellular, vacuole	65.9	66.51
TraesCS1A01G053000.1	Wheat	extracellular	65.9	66.51
TraesCS2B01G387100.1	Wheat	extracellular, vacuole	65.9	66.51
TraesCSU01G007100.1	Wheat	extracellular	65.9	66.51
EES05072	Sorghum	extracellular	66.36	66.36
TraesCS1B01G070100.1	Wheat	extracellular, vacuole	65.44	66.05
TraesCS6B01G047200.1	Wheat	extracellular	66.82	65.91
EES05077	Sorghum	extracellular, vacuole	64.98	64.98
EES05076	Sorghum	extracellular	65.44	64.84
TraesCS2D01G366500.1	Wheat	extracellular, vacuole	64.06	64.65
HORVU1Hr1G010740.1	Barley	extracellular	65.44	64.55
GSMUA_Achr8P33400_001	Banana	extracellular	56.68	64.4
GSMUA_Achr8P33390_001	Banana	extracellular	64.52	64.22
TraesCS7A01G451800.1	Wheat	extracellular	64.52	64.22
TraesCS7B01G351600.1	Wheat	extracellular	64.52	64.22
TraesCS7D01G440700.1	Wheat	extracellular	64.52	64.22
TraesCS7D01G440900.1	Wheat	extracellular	64.52	64.22
TraesCS7D01G441000.1	Wheat	extracellular	64.52	64.22
Os02t0491700-00	Rice	extracellular	65.9	64.13
GSMUA_Achr8P33360_001	Banana	extracellular	64.06	64.06
HORVU7Hr1G102000.2	Barley	extracellular, vacuole	64.98	63.8
TraesCS7A01G451700.1	Wheat	extracellular	64.06	63.76
TraesCS7B01G351500.1	Wheat	extracellular	64.06	63.76
TraesCS7B01G351700.1	Wheat	extracellular	64.06	63.76
TraesCS7B01G351800.1	Wheat	extracellular	64.06	63.76
TraesCS2A01G370100.1	Wheat	extracellular, vacuole	55.76	63.68
GSMUA_Achr8P33370_001	Banana	extracellular	63.59	63.3
GSMUA_AchrUn_...	Banana	extracellular	63.59	63.3
TraesCS7D01G440600.1	Wheat	extracellular	63.59	63.3
TraesCS1D01G054500.1	Wheat	extracellular, vacuole	53.92	63.24
GSMUA_Achr5P26710_001	Banana	cytosol	58.53	63.18
HORVU1Hr1G010710.1	Barley	vacuole	65.44	63.11
TraesCS7A01G452000.1	Wheat	extracellular	63.13	62.84
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	48.85	62.72
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	56.22	62.56
HORVU7Hr1G101990.1	Barley	extracellular	64.06	62.05
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	61.75	61.75
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	61.29	61.29
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	61.29	61.29
HORVU1Hr1G010640.1	Barley	extracellular, vacuole	59.91	60.75
TraesCS7A01G473600.1	Wheat	extracellular	63.13	60.62
TraesCS3D01G010900.1	Wheat	extracellular	63.59	60.53
Zm00001d049438_P001	Maize	extracellular	61.75	60.36
PGSC0003DMT400040093	Potato	extracellular	63.13	60.09
PGSC0003DMT400053423	Potato	extracellular	63.13	60.09
Os08t0189600-01	Rice	extracellular	62.21	60.0
TraesCS3A01G012500.1	Wheat	extracellular	62.21	59.73
TraesCS3D01G011100.1	Wheat	extracellular	62.21	59.73
TraesCS7A01G473400.1	Wheat	extracellular	62.21	59.73
TraesCS7B01G374800.1	Wheat	extracellular	62.21	59.73
TraesCS7B01G374900.1	Wheat	extracellular	62.21	59.73
TraesCS7D01G460500.1	Wheat	extracellular	62.21	59.73
EES13478	Sorghum	extracellular	62.67	59.65
OQU80011	Sorghum	extracellular	62.67	59.65
Zm00001d049419_P001	Maize	extracellular	62.67	59.65
EES14666	Sorghum	extracellular	62.21	59.47
Os08t0189700-01	Rice	extracellular	61.29	59.38
Os08t0189850-01	Rice	extracellular	61.29	59.38
Os08t0188900-01	Rice	plastid	59.91	59.36
EES13474	Sorghum	extracellular	62.21	59.21
KXG24637	Sorghum	extracellular	62.21	59.21
OQU80014	Sorghum	extracellular	62.21	59.21
OQU80017	Sorghum	extracellular	62.21	59.21
OQU80021	Sorghum	extracellular	62.21	59.21
OQU80024	Sorghum	extracellular	62.21	59.21
Zm00001d049418_P001	Maize	extracellular	62.21	59.21
Os08t0189500-01	Rice	extracellular	61.29	59.11
Zm00001d000006_P001	Maize	extracellular	61.29	59.11
Os08t0189900-01	Rice	extracellular	60.83	58.93
Os08t0189100-01	Rice	extracellular	59.91	58.82
Zm00001d049427_P001	Maize	extracellular, plastid	61.75	58.77
OQU80013	Sorghum	cytosol, extracellular, peroxisome	53.46	58.59
HORVU3Hr1G002000.1	Barley	extracellular	61.75	58.52
TraesCS4B01G377200.1	Wheat	extracellular	61.75	58.52
TraesCSU01G128000.1	Wheat	extracellular	61.75	58.52
Os08t0190100-01	Rice	extracellular	60.37	58.48
TraesCS3D01G011000.1	Wheat	extracellular	60.83	58.41
PGSC0003DMT400046992	Potato	extracellular	61.29	58.33
Zm00001d049437_P001	Maize	extracellular	61.29	58.33
TraesCS4B01G376900.1	Wheat	extracellular	60.37	58.22
TraesCS3A01G012600.1	Wheat	extracellular	61.29	58.08
TraesCS3D01G010800.1	Wheat	extracellular	61.29	58.08
TraesCS4B01G378000.1	Wheat	extracellular	61.29	58.08
TraesCS5A01G545200.1	Wheat	extracellular	61.29	58.08
TraesCSU01G128700.1	Wheat	golgi	61.29	58.08
TraesCSU01G145300.1	Wheat	extracellular	61.29	58.08
Zm00001d049428_P001	Maize	extracellular, plastid	61.29	58.08
Zm00001d049420_P001	Maize	extracellular	60.83	57.89
Zm00001d049431_P001	Maize	extracellular, plastid	60.83	57.89
Zm00001d049432_P001	Maize	extracellular, plastid	60.83	57.89
Zm00001d049433_P001	Maize	extracellular	60.83	57.89
Zm00001d049436_P001	Maize	extracellular, plastid	60.83	57.89
TraesCS5A01G543600.1	Wheat	extracellular	59.91	57.78
TraesCS4B01G377100.1	Wheat	extracellular	60.83	57.64
TraesCS4B01G377300.1	Wheat	extracellular	60.83	57.64
TraesCS4B01G377400.1	Wheat	extracellular	60.83	57.64
TraesCS4B01G377500.1	Wheat	extracellular	60.83	57.64
TraesCS4B01G377800.1	Wheat	extracellular	60.83	57.64
TraesCS5A01G543700.1	Wheat	extracellular	60.83	57.64
TraesCS5A01G543900.1	Wheat	extracellular	60.83	57.64
TraesCS5A01G544200.1	Wheat	extracellular	60.83	57.64
TraesCS5A01G545400.1	Wheat	extracellular	60.83	57.64
TraesCSU01G127900.1	Wheat	extracellular	60.83	57.64
TraesCSU01G128100.1	Wheat	extracellular	60.83	57.64
TraesCSU01G128400.1	Wheat	extracellular	60.83	57.64
TraesCSU01G128500.1	Wheat	extracellular	60.83	57.64
TraesCSU01G128600.1	Wheat	extracellular	60.83	57.64
TraesCSU01G128800.1	Wheat	extracellular	60.83	57.64
TraesCSU01G145500.1	Wheat	extracellular	60.83	57.64
TraesCSU01G145600.1	Wheat	extracellular	60.83	57.64
TraesCSU01G145700.1	Wheat	extracellular	60.83	57.64
TraesCSU01G151900.1	Wheat	extracellular	60.83	57.64
TraesCSU01G152000.1	Wheat	extracellular	60.83	57.64
TraesCSU01G161300.1	Wheat	extracellular	60.83	57.64
TraesCSU01G222000.1	Wheat	extracellular	60.83	57.64
TraesCSU01G238600.1	Wheat	extracellular	60.83	57.64
TraesCSU01G253400.1	Wheat	extracellular	60.83	57.64
Zm00001d049421_P001	Maize	extracellular, plastid	60.83	57.64
Zm00001d049423_P001	Maize	extracellular	60.83	57.64
Zm00001d049435_P001	Maize	extracellular	60.83	57.64
TraesCS3A01G012400.1	Wheat	extracellular	59.91	57.52
Zm00001d000018_P001	Maize	extracellular	59.91	57.52
TraesCS4B01G376700.1	Wheat	extracellular	33.64	57.48
EES13468	Sorghum	extracellular	60.37	57.46
EES13470	Sorghum	extracellular	60.37	57.46
OQU80018	Sorghum	extracellular	60.37	57.46
OQU80022	Sorghum	extracellular	60.37	57.46
Zm00001d049430_P001	Maize	extracellular, plastid	60.37	57.46
Os12t0155000-01	Rice	cytosol, extracellular, vacuole	51.61	57.44
HORVU0Hr1G009460.4	Barley	extracellular	60.37	57.21
Os12t0154700-01	Rice	extracellular	60.37	57.21
Os12t0154800-01	Rice	extracellular	60.37	57.21
TraesCS4B01G377000.1	Wheat	extracellular	60.37	57.21
TraesCS5A01G544400.1	Wheat	extracellular	60.37	57.21
TraesCSU01G128300.1	Wheat	extracellular	60.37	57.21
TraesCSU01G150700.1	Wheat	extracellular	60.37	57.21
HORVU0Hr1G009450.1	Barley	extracellular	60.83	57.14
Os08t0189400-01	Rice	extracellular	58.99	57.14
EES13464	Sorghum	extracellular	59.45	57.08
Zm00001d049426_P001	Maize	plastid	41.94	56.88
Zm00001d000012_P001	Maize	extracellular	59.45	56.83
HORVU4Hr1G090120.1	Barley	extracellular	59.91	56.77
TraesCS4B01G377900.1	Wheat	extracellular	59.91	56.77
TraesCS5A01G544500.1	Wheat	extracellular	59.91	56.77
Zm00001d000017_P001	Maize	extracellular	58.99	56.64
PGSC0003DMT400046891	Potato	extracellular	59.91	56.52
TraesCSU01G245800.1	Wheat	extracellular	58.06	56.5
TraesCS5A01G543800.1	Wheat	extracellular	59.45	56.33
TraesCS5A01G544000.1	Wheat	extracellular	59.45	56.33
PGSC0003DMT400046887	Potato	extracellular	58.99	55.65
GSMUA_Achr5P26700_001	Banana	extracellular	45.62	55.31
TraesCS4B01G377700.1	Wheat	extracellular	54.84	55.09
Os12t0154900-00	Rice	extracellular	58.06	55.02
TraesCSU01G152900.1	Wheat	extracellular	57.6	54.59
HORVU3Hr1G001990.1	Barley	extracellular, plastid, vacuole	63.59	54.55
Os08t0189300-01	Rice	extracellular	56.22	54.46
TraesCS5B01G048500.1	Wheat	extracellular	56.68	54.42
TraesCS5D01G054300.1	Wheat	extracellular	56.68	54.42
EES13475	Sorghum	extracellular	53.92	54.42
Os08t0189200-01	Rice	extracellular	56.22	54.22
EES11809	Sorghum	extracellular	57.14	54.15
HORVU0Hr1G009470.2	Barley	plastid	60.37	54.13
Os08t0231400-01	Rice	extracellular	55.76	54.02
HORVU4Hr1G090130.1	Barley	endoplasmic reticulum, extracellular, plastid	60.83	53.66
HORVU5Hr1G010880.2	Barley	extracellular	56.22	53.28
TraesCS1B01G069900.1	Wheat	extracellular	64.98	53.21
Zm00001d004401_P001	Maize	extracellular	55.3	53.1
TraesCS1B01G069600.1	Wheat	extracellular	64.52	52.83
TraesCS5A01G044300.1	Wheat	extracellular	57.14	52.77
Zm00001d049439_P001	Maize	cytosol, peroxisome, plastid	34.56	52.45
TraesCS3B01G075600.1	Wheat	extracellular	54.84	52.42
TraesCS3B01G075700.1	Wheat	endoplasmic reticulum, extracellular	54.84	52.42
Zm00001d025059_P001	Maize	extracellular	54.84	52.42
TraesCS7A01G386800.1	Wheat	endoplasmic reticulum, extracellular	54.84	50.64
TraesCS7B01G289600.1	Wheat	endoplasmic reticulum, extracellular	54.84	50.64
TraesCS7D01G383300.1	Wheat	extracellular	54.84	50.64
HORVU3Hr1G011990.3	Barley	extracellular	53.92	50.43
TraesCSU01G152800.1	Wheat	plastid	60.37	50.38
HORVU7Hr1G091800.1	Barley	endoplasmic reticulum, extracellular, plastid	53.92	49.79
PGSC0003DMT400044231	Potato	extracellular	50.69	49.11
GSMUA_Achr9P30640_001	Banana	extracellular, vacuole	52.07	48.29
GSMUA_Achr8P33380_001	Banana	extracellular	49.31	47.56
PGSC0003DMT400087849	Potato	extracellular	94.01	47.55
TraesCS4B01G378200.1	Wheat	plastid	60.83	47.14
TraesCS4B01G378400.1	Wheat	plastid	59.91	46.93
HORVU4Hr1G090190.4	Barley	extracellular	60.37	46.79
HORVU2Hr1G104240.1	Barley	extracellular	56.22	46.39
TraesCS2A01G459900.1	Wheat	extracellular, vacuole	56.22	46.39
TraesCS2B01G481600.1	Wheat	extracellular, vacuole	56.22	46.39
EES12867	Sorghum	extracellular, vacuole	55.76	46.01
TraesCS2D01G460200.1	Wheat	extracellular, vacuole	55.76	46.01
TraesCS2B01G481500.1	Wheat	vacuole	56.68	45.56
HORVU2Hr1G104220.1	Barley	extracellular	56.22	45.35
TraesCS2D01G460100.1	Wheat	vacuole	56.22	45.19
Zm00001d002295_P001	Maize	extracellular	54.38	44.87
TraesCS2A01G459800.1	Wheat	vacuole	55.76	44.81
PGSC0003DMT400044224	Potato	extracellular	43.32	41.78
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	61.29	31.22

Protein Annotations

EntrezGene:102601448	Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M1ATA0	PFAM:PF00190	EnsemblPlantsGene:PGSC0003DMG400011418	PGSC:PGSC0003DMG400011418
EnsemblPlants:PGSC0003DMT400029689	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF41	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296B56D
RefSeq:XP_006362217.1	SEG:seg	:	:	:	:

Description

Rhicadhesin receptor [Source:PGSC_GENE;Acc:PGSC0003DMG400011418]

Coordinates

chr10:-:58881482..58882474

Molecular Weight (calculated)

23083.8 Da

IEP (calculated)

7.549

GRAVY (calculated)

0.334

Length

217 amino acids

Sequence
(BLAST)

001: MAKHFLLLNL IAVVSFCCVV IAFEPSPMQD FCVADPTSTV KVNGLSCKDP KSVIAEDFFF SGLHLSGNTS NTFGSKVTPA NVAQIPGVNT LGISLARVDY
101: APWGINPPHT HPRATEILTV LEGFLQVGFV TSNPENRHIT KVLKKGDVFV FPIGLVHYQR NVGNGNAVAF AALSSQNPGV ISVANAVFGS EPTIATDILA
201: KAFQVDATVV AQIQSKF

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.