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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 extracellular: 23159799
extracellular: 24083427
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0189200-01 Rice extracellular 88.39 88.0
Os08t0189300-01 Rice extracellular 86.16 86.16
Zm00001d004401_P001 Maize extracellular 81.7 80.97
EES11809 Sorghum extracellular 82.14 80.35
Zm00001d025059_P001 Maize extracellular 81.25 80.18
TraesCS5B01G048500.1 Wheat extracellular 80.8 80.09
TraesCS5D01G054300.1 Wheat extracellular 80.36 79.65
HORVU5Hr1G010880.2 Barley extracellular 80.36 78.6
TraesCS3B01G075600.1 Wheat extracellular 78.12 77.09
TraesCS3B01G075700.1 Wheat endoplasmic reticulum, extracellular 77.68 76.65
TraesCS5A01G044300.1 Wheat extracellular 80.36 76.6
HORVU7Hr1G091800.1 Barley endoplasmic reticulum, extracellular, plastid 79.02 75.32
Os08t0190100-01 Rice extracellular 75.0 75.0
TraesCS7B01G289600.1 Wheat endoplasmic reticulum, extracellular 78.57 74.89
TraesCS7D01G383300.1 Wheat extracellular 78.57 74.89
HORVU3Hr1G011990.3 Barley extracellular 77.23 74.57
Os08t0189400-01 Rice extracellular 74.11 74.11
TraesCS7A01G386800.1 Wheat endoplasmic reticulum, extracellular 77.68 74.04
Os08t0189500-01 Rice extracellular 72.32 72.0
Os08t0189900-01 Rice extracellular 71.88 71.88
Os08t0189700-01 Rice extracellular 71.43 71.43
Os08t0188900-01 Rice plastid 69.64 71.23
Os08t0189600-01 Rice extracellular 71.43 71.11
Os08t0189100-01 Rice extracellular 70.09 71.04
Os08t0189850-01 Rice extracellular 70.54 70.54
VIT_14s0128g01040.t01 Wine grape peroxisome 38.39 69.92
Os12t0155000-01 Rice cytosol, extracellular, vacuole 59.38 68.21
GSMUA_Achr5P26690_001 Banana extracellular, vacuole 58.93 67.69
Os12t0154800-01 Rice extracellular 69.2 67.69
Os12t0154700-01 Rice extracellular 68.75 67.25
Os12t0154900-00 Rice extracellular 67.41 65.94
VIT_14s0006g02360.t01 Wine grape cytosol, plastid 60.27 65.85
GSMUA_Achr5P26710_001 Banana cytosol 58.48 65.17
GSMUA_Achr5P26730_001 Banana extracellular, vacuole 62.95 64.98
GSMUA_Achr5P26750_001 Banana extracellular, vacuole 62.95 64.98
GSMUA_Achr5P26760_001 Banana extracellular, vacuole 62.5 64.52
VIT_16s0039g02920.t01 Wine grape plastid 52.68 64.13
Os02t0491600-00 Rice extracellular 61.61 63.89
VIT_14s0006g02440.t01 Wine grape extracellular, vacuole 62.95 63.8
VIT_14s0060g02700.t01 Wine grape cytosol 60.27 63.68
VIT_14s0006g02390.t01 Wine grape extracellular 62.5 63.35
VIT_14s0006g02420.t01 Wine grape extracellular, vacuole 62.5 63.35
VIT_14s0006g02380.t01 Wine grape extracellular 61.61 63.3
VIT_14s0060g02730.t01 Wine grape peroxisome 58.48 63.28
VIT_14s0006g02330.t01 Wine grape extracellular, vacuole 62.05 62.9
VIT_14s0006g02350.t01 Wine grape extracellular 62.05 62.9
VIT_14s0006g02370.t01 Wine grape extracellular 62.05 62.9
Os02t0491800-00 Rice extracellular 62.5 62.78
VIT_14s0006g02430.t01 Wine grape extracellular 60.71 62.39
KRG92599 Soybean extracellular 61.61 62.16
VIT_16s0013g00010.t01 Wine grape extracellular 62.05 61.78
VIT_16s0013g00060.t01 Wine grape extracellular 61.61 61.33
VIT_16s0039g02860.t01 Wine grape extracellular 61.16 60.89
KRH07003 Soybean extracellular 59.82 60.63
VIT_14s0060g02690.t01 Wine grape extracellular 59.38 60.45
KRH07002 Soybean extracellular 59.38 60.18
PGSC0003DMT400046992 Potato extracellular 61.16 60.09
VIT_14s0128g00650.t01 Wine grape extracellular 58.93 60.0
VIT_14s0128g01030.t01 Wine grape extracellular, vacuole 58.93 60.0
GSMUA_Achr5P26700_001 Banana extracellular 47.77 59.78
PGSC0003DMT400040093 Potato extracellular 60.71 59.65
PGSC0003DMT400053423 Potato extracellular 60.71 59.65
Solyc01g102900.2.1 Tomato extracellular 60.71 59.65
Os02t0491700-00 Rice extracellular 59.38 59.64
VIT_14s0060g02750.t01 Wine grape extracellular, vacuole 58.48 59.55
VIT_14s0128g00920.t01 Wine grape extracellular, vacuole 58.48 59.28
VIT_12s0059g00730.t01 Wine grape extracellular 57.14 59.26
VIT_14s0060g02760.t01 Wine grape extracellular, vacuole 58.04 59.09
VIT_14s0128g00990.t01 Wine grape extracellular, vacuole 58.04 59.09
VIT_14s0128g01020.t01 Wine grape extracellular, vacuole 58.04 59.09
VIT_10s0003g05300.t01 Wine grape extracellular, vacuole 56.7 59.07
KRG94458 Soybean extracellular 57.59 58.9
VIT_14s0060g02710.t01 Wine grape extracellular, vacuole 51.79 58.88
KRG94060 Soybean extracellular 58.04 58.82
KRG94062 Soybean extracellular 58.04 58.82
KRG94063 Soybean extracellular 58.04 58.82
KRG94068 Soybean extracellular 58.04 58.82
KRG94455 Soybean extracellular 58.04 58.82
VIT_14s0128g00980.t01 Wine grape extracellular, vacuole 57.59 58.64
KRH07008 Soybean extracellular, plasma membrane, vacuole 56.25 58.6
KRG94453 Soybean extracellular 55.36 58.49
KRG94454 Soybean extracellular 57.59 58.37
KRG94457 Soybean extracellular 57.59 58.37
KRH34184 Soybean extracellular 60.27 58.19
KRH07001 Soybean extracellular 57.14 58.18
VIT_14s0128g01010.t01 Wine grape extracellular, vacuole 57.14 58.18
KRG94046 Soybean extracellular 46.88 58.01
KRH07007 Soybean extracellular 57.14 57.92
VIT_16s0013g00090.t01 Wine grape extracellular, vacuole 58.93 57.89
VIT_14s0128g01000.t01 Wine grape extracellular, vacuole 58.04 57.78
KRG92598 Soybean extracellular 59.82 57.76
VIT_10s0003g05260.t01 Wine grape extracellular 55.36 57.41
PGSC0003DMT400046891 Potato extracellular 58.93 57.39
KRH11811 Soybean extracellular 54.91 57.21
KRH42281 Soybean extracellular 54.91 57.21
KRH58405 Soybean vacuole 54.91 57.21
KRH34183 Soybean extracellular 50.45 57.07
VIT_14s0128g00690.t01 Wine grape extracellular, plasma membrane, vacuole 57.14 56.89
PGSC0003DMT400046879 Potato cytosol, extracellular, plastid, vacuole 42.86 56.8
VIT_10s0003g05250.t01 Wine grape extracellular 54.46 56.74
PGSC0003DMT400029687 Potato extracellular 54.91 56.68
KRG94695 Soybean nucleus 53.57 56.6
PGSC0003DMT400046887 Potato extracellular 58.04 56.52
Solyc10g078840.1.1 Tomato extracellular 54.46 56.22
AT5G39150.1 Thale cress extracellular 55.36 56.11
AT5G39180.1 Thale cress extracellular 55.36 56.11
Bra020560.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 55.8 56.05
CDX99669 Canola vacuole 55.8 56.05
CDY05545 Canola endoplasmic reticulum, extracellular, vacuole 55.8 56.05
CDY15957 Canola vacuole 55.8 56.05
PGSC0003DMT400029689 Potato extracellular 54.02 55.76
VIT_12s0059g00720.t01 Wine grape plastid 39.29 55.7
AT5G39120.1 Thale cress extracellular 54.91 55.66
Bra030358.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 55.36 55.61
AT3G05950.1 Thale cress extracellular, plasma membrane, vacuole 56.7 55.46
AT5G39160.1 Thale cress extracellular, vacuole 54.91 55.41
Solyc10g078850.1.1 Tomato extracellular 51.79 55.24
AT5G39110.1 Thale cress endoplasmic reticulum, extracellular, vacuole 54.46 54.95
AT5G39190.1 Thale cress extracellular, vacuole 54.46 54.95
CDY11695 Canola endoplasmic reticulum, extracellular, vacuole 53.57 54.79
CDY66959 Canola extracellular 53.57 54.79
CDY69099 Canola endoplasmic reticulum, extracellular, vacuole 53.57 54.79
AT5G39130.1 Thale cress extracellular 54.02 54.5
Bra028225.1-P Field mustard extracellular, vacuole 54.02 54.5
CDX74487 Canola extracellular, vacuole 54.02 54.5
CDY37880 Canola extracellular 54.02 54.5
KRH36828 Soybean extracellular 52.68 54.38
Bra028467.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 53.12 54.34
Bra039727.1-P Field mustard extracellular 53.12 54.09
CDY36875 Canola extracellular, vacuole 53.12 54.09
CDY53728 Canola extracellular 53.12 54.09
Bra040243.1-P Field mustard extracellular, plasma membrane, vacuole 54.91 53.71
CDY18834 Canola extracellular, plasma membrane, vacuole 54.91 53.71
CDY36876 Canola extracellular 52.68 53.64
AT5G38930.1 Thale cress extracellular 53.12 53.36
AT4G14630.1 Thale cress extracellular 52.23 52.7
AT3G04200.1 Thale cress extracellular, vacuole 53.12 52.42
CDY69461 Canola extracellular 44.64 52.36
AT5G38960.1 Thale cress extracellular 51.79 52.02
KRG94061 Soybean extracellular, plasma membrane, vacuole 46.88 50.97
VIT_14s0128g00970.t01 Wine grape vacuole 58.04 50.78
Bra027979.1-P Field mustard extracellular 44.2 50.25
CDX95190 Canola extracellular 44.2 50.25
Bra028424.1-P Field mustard extracellular, vacuole 47.77 48.64
CDX67421 Canola extracellular, vacuole 47.77 48.64
AT5G38940.2 Thale cress plastid 53.12 48.18
Bra025428.1-P Field mustard cytosol, extracellular, vacuole 52.23 46.61
Solyc09g089990.2.1 Tomato extracellular 46.43 46.43
Bra001097.1-P Field mustard extracellular, plasma membrane, vacuole 48.21 46.35
AT3G04170.1 Thale cress extracellular, vacuole 46.88 46.26
PGSC0003DMT400044231 Potato extracellular 45.98 45.98
AT3G04180.1 Thale cress extracellular, vacuole 45.54 45.95
AT3G04190.1 Thale cress extracellular, vacuole 45.09 45.5
CDX74197 Canola cytosol, extracellular, plastid, vacuole 39.29 45.36
PGSC0003DMT400044224 Potato extracellular 45.09 44.89
Solyc09g090040.2.1 Tomato extracellular 45.54 44.74
CDX99677 Canola extracellular, vacuole 52.68 42.91
AT3G04150.2 Thale cress extracellular, vacuole 45.54 42.15
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 63.84 33.57
PGSC0003DMT400087849 Potato extracellular 55.36 28.9
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:4344999EMBL:AK059812ProteinID:BAD01255.1ProteinID:BAF23217.1
ProteinID:BAT04433.1InterPro:Cupin_1ProteinID:EAZ41952.1GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0030145GO:GO:0030312GO:GO:0045735
GO:GO:0046872GO:GO:0048046InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710EnsemblPlantsGene:Os08g0231400
EnsemblPlants:Os08t0231400-01PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF38
UniProt:Q6ZCR3InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTM
UniParc:UPI0000212FC0RefSeq:XP_015648080.1SEG:seg:::
Description
GERMIN-LIKE PROTEIN 8-12Germin-like protein 8-12, Disease resistance (Os08t0231400-01)
Coordinates
chr8:-:7994404..7995717
Molecular Weight (calculated)
24577.6 Da
IEP (calculated)
5.598
GRAVY (calculated)
0.104
Length
224 amino acids
Sequence
(BLAST)
001: MASSSLFLLG ALLVLASWQA IVAYDPSPLQ DFCVADMNSP VRVNGFACKN PMDVSSEDFF NAAKFDMPRN TFNKLGSNVT NLNVMEFPGL NTLGISLARI
101: DYAPMGVNPP HIHPRATELL TVLEGTLYVG FVTSNPNKLF SKVVCKGDVF VFPKAMIHFQ MNLDHDKPAV AQSALSSQNP GVITIASAVF GSQPPISDDV
201: LTKAFQVEKK LIDWLQSQFW ENNY
Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)
001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY
Arabidopsis Description
Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.