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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G38930.1 Thale cress extracellular 70.85 70.85
AT4G14630.1 Thale cress extracellular 69.51 69.82
AT5G39150.1 Thale cress extracellular 65.02 65.61
AT5G38940.2 Thale cress plastid 72.65 65.59
AT5G39110.1 Thale cress endoplasmic reticulum, extracellular, vacuole 65.02 65.32
AT5G39120.1 Thale cress extracellular 64.57 65.16
AT5G39180.1 Thale cress extracellular 64.57 65.16
Bra028424.1-P Field mustard extracellular, vacuole 63.23 64.09
CDX67421 Canola extracellular, vacuole 63.23 64.09
PGSC0003DMT400046879 Potato cytosol, extracellular, plastid, vacuole 47.53 62.72
AT5G39160.1 Thale cress extracellular, vacuole 62.33 62.61
AT5G39190.1 Thale cress extracellular, vacuole 62.33 62.61
GSMUA_Achr5P26730_001 Banana extracellular, vacuole 60.54 62.21
GSMUA_Achr5P26750_001 Banana extracellular, vacuole 60.54 62.21
GSMUA_Achr5P26760_001 Banana extracellular, vacuole 60.54 62.21
KRG92599 Soybean extracellular 61.88 62.16
GSMUA_Achr5P26690_001 Banana extracellular, vacuole 54.26 62.05
AT5G39130.1 Thale cress extracellular 61.44 61.71
PGSC0003DMT400053423 Potato extracellular 62.78 61.4
Solyc01g102900.2.1 Tomato extracellular 62.78 61.4
TraesCS1A01G053100.1 Wheat extracellular, vacuole 59.19 61.4
Zm00001d049438_P001 Maize extracellular 60.99 61.26
TraesCSU01G006900.1 Wheat extracellular 58.74 60.93
EES05073 Sorghum extracellular 59.19 60.83
Os08t0189850-01 Rice extracellular 60.99 60.71
PGSC0003DMT400040093 Potato extracellular 61.88 60.53
TraesCS1A01G053000.1 Wheat extracellular 58.3 60.47
TraesCSU01G007100.1 Wheat extracellular 58.3 60.47
Os08t0189700-01 Rice extracellular 60.54 60.27
OQU80013 Sorghum cytosol, extracellular, peroxisome 53.36 60.1
PGSC0003DMT400046992 Potato extracellular 61.44 60.09
TraesCS1B01G069500.1 Wheat extracellular, vacuole 57.85 60.0
TraesCS1B01G069800.1 Wheat extracellular, vacuole 57.85 60.0
Zm00001d000006_P001 Maize extracellular 60.54 60.0
EES05072 Sorghum extracellular 58.3 59.91
EES05075 Sorghum extracellular 58.3 59.91
Os08t0189900-01 Rice extracellular 60.09 59.82
EES05076 Sorghum extracellular 58.74 59.82
EES13474 Sorghum extracellular 60.99 59.65
Zm00001d049427_P001 Maize extracellular, plastid 60.99 59.65
TraesCS1A01G052600.1 Wheat extracellular, vacuole 57.4 59.53
TraesCS1B01G070300.1 Wheat extracellular, vacuole 57.4 59.53
TraesCS1D01G054600.1 Wheat extracellular 57.4 59.53
EES14666 Sorghum extracellular 60.54 59.47
GSMUA_Achr8P33360_001 Banana extracellular 57.85 59.45
TraesCS7B01G374800.1 Wheat extracellular 60.09 59.29
TraesCS7B01G374900.1 Wheat extracellular 60.09 59.29
Os02t0491600-00 Rice extracellular 57.4 59.26
EES13478 Sorghum extracellular 60.54 59.21
KXG24637 Sorghum extracellular 60.54 59.21
OQU80014 Sorghum extracellular 60.54 59.21
OQU80017 Sorghum extracellular 60.54 59.21
OQU80021 Sorghum extracellular 60.54 59.21
Zm00001d049420_P001 Maize extracellular 60.54 59.21
Zm00001d049432_P001 Maize extracellular, plastid 60.54 59.21
Zm00001d049433_P001 Maize extracellular 60.54 59.21
Zm00001d049437_P001 Maize extracellular 60.54 59.21
GSMUA_Achr5P26710_001 Banana cytosol 53.36 59.2
Os02t0491700-00 Rice extracellular 59.19 59.19
Os08t0189500-01 Rice extracellular 59.64 59.11
Os08t0189600-01 Rice extracellular 59.64 59.11
TraesCS1D01G054400.1 Wheat extracellular 56.95 59.07
EES05074 Sorghum extracellular 57.4 58.99
AT3G05950.1 Thale cress extracellular, plasma membrane, vacuole 60.54 58.95
Zm00001d049423_P001 Maize extracellular 60.54 58.95
Zm00001d049428_P001 Maize extracellular, plastid 60.54 58.95
Zm00001d049435_P001 Maize extracellular 60.54 58.95
TraesCS7A01G473600.1 Wheat extracellular 59.64 58.85
TraesCS7D01G460500.1 Wheat extracellular 59.64 58.85
KRH07007 Soybean extracellular 58.3 58.82
OQU80024 Sorghum extracellular 60.09 58.77
Zm00001d049431_P001 Maize extracellular, plastid 60.09 58.77
Zm00001d049436_P001 Maize extracellular, plastid 60.09 58.77
TraesCS2B01G083400.1 Wheat extracellular, vacuole 46.64 58.76
PGSC0003DMT400046891 Potato extracellular 60.54 58.7
KRG92598 Soybean extracellular 60.99 58.62
TraesCS1A01G052700.1 Wheat extracellular, vacuole 56.5 58.6
TraesCS1B01G070100.1 Wheat extracellular, vacuole 56.5 58.6
TraesCS2B01G387100.1 Wheat extracellular, vacuole 56.5 58.6
TraesCS2D01G366500.1 Wheat extracellular, vacuole 56.5 58.6
KRH34183 Soybean extracellular 52.02 58.59
Os08t0189400-01 Rice extracellular 58.74 58.48
KRH07003 Soybean extracellular 57.85 58.37
Os08t0189100-01 Rice extracellular 57.85 58.37
OQU80011 Sorghum extracellular 59.64 58.33
Zm00001d049418_P001 Maize extracellular 59.64 58.33
Zm00001d049419_P001 Maize extracellular 59.64 58.33
Zm00001d049430_P001 Maize extracellular, plastid 59.64 58.33
GSMUA_Achr8P33390_001 Banana extracellular 56.95 58.26
GSMUA_AchrUn_... Banana extracellular 56.95 58.26
Zm00001d053249_P001 Maize extracellular, vacuole 56.95 58.26
KRH07001 Soybean extracellular 57.4 58.18
AT3G04200.1 Thale cress extracellular, vacuole 59.19 58.15
HORVU1Hr1G010600.1 Barley extracellular, vacuole 56.05 58.14
Zm00001d049421_P001 Maize extracellular, plastid 59.64 58.08
KRH07002 Soybean extracellular 57.4 57.92
TraesCS2A01G370100.1 Wheat extracellular, vacuole 49.33 57.89
TraesCS1D01G054500.1 Wheat extracellular, vacuole 47.98 57.84
PGSC0003DMT400046887 Potato extracellular 59.64 57.83
TraesCS5A01G543600.1 Wheat extracellular 58.3 57.78
KRH34184 Soybean extracellular 60.09 57.76
HORVU1Hr1G010740.1 Barley extracellular 56.95 57.73
GSMUA_Achr8P33400_001 Banana extracellular 49.33 57.59
Os08t0190100-01 Rice extracellular 57.85 57.59
TraesCS3A01G012400.1 Wheat extracellular 58.3 57.52
TraesCS7A01G473400.1 Wheat extracellular 58.3 57.52
Zm00001d049426_P001 Maize plastid 41.26 57.5
KRG94060 Soybean extracellular 56.95 57.47
KRG94062 Soybean extracellular 56.95 57.47
KRG94063 Soybean extracellular 56.95 57.47
KRG94068 Soybean extracellular 56.95 57.47
KRG94046 Soybean extracellular 46.64 57.46
TraesCS3D01G010900.1 Wheat extracellular 58.74 57.46
Os12t0155000-01 Rice cytosol, extracellular, vacuole 50.22 57.44
GSMUA_Achr8P33370_001 Banana extracellular 56.05 57.34
TraesCS4B01G376900.1 Wheat extracellular 57.85 57.33
HORVU3Hr1G002000.1 Barley extracellular 58.74 57.21
TraesCS3D01G010800.1 Wheat extracellular 58.74 57.21
TraesCS4B01G377800.1 Wheat extracellular 58.74 57.21
TraesCS5A01G543700.1 Wheat extracellular 58.74 57.21
TraesCS5A01G545200.1 Wheat extracellular 58.74 57.21
TraesCSU01G145500.1 Wheat extracellular 58.74 57.21
TraesCSU01G145600.1 Wheat extracellular 58.74 57.21
TraesCS3A01G012500.1 Wheat extracellular 57.85 57.08
Zm00001d000018_P001 Maize extracellular 57.85 57.08
EES13468 Sorghum extracellular 58.3 57.02
EES13470 Sorghum extracellular 58.3 57.02
OQU80018 Sorghum extracellular 58.3 57.02
OQU80022 Sorghum extracellular 58.3 57.02
KRG94454 Soybean extracellular 56.5 57.01
KRG94455 Soybean extracellular 56.5 57.01
KRG94457 Soybean extracellular 56.5 57.01
TraesCS4B01G377200.1 Wheat extracellular 58.3 56.77
TraesCS4B01G377500.1 Wheat extracellular 58.3 56.77
TraesCS5A01G543900.1 Wheat extracellular 58.3 56.77
TraesCS5A01G544200.1 Wheat extracellular 58.3 56.77
TraesCS5A01G544500.1 Wheat extracellular 58.3 56.77
TraesCS5A01G545400.1 Wheat extracellular 58.3 56.77
TraesCSU01G127900.1 Wheat extracellular 58.3 56.77
TraesCSU01G128400.1 Wheat extracellular 58.3 56.77
TraesCSU01G222000.1 Wheat extracellular 58.3 56.77
TraesCSU01G238600.1 Wheat extracellular 58.3 56.77
TraesCSU01G253400.1 Wheat extracellular 58.3 56.77
EES13475 Sorghum extracellular 54.71 56.74
EES05077 Sorghum extracellular, vacuole 55.16 56.68
EES13464 Sorghum extracellular 57.4 56.64
TraesCS3D01G011000.1 Wheat extracellular 57.4 56.64
TraesCS3D01G011100.1 Wheat extracellular 57.4 56.64
Zm00001d000017_P001 Maize extracellular 57.4 56.64
Os02t0491800-00 Rice extracellular 56.5 56.5
HORVU1Hr1G010710.1 Barley vacuole 56.95 56.44
TraesCS6A01G033500.1 Wheat extracellular 55.61 56.36
HORVU0Hr1G009460.4 Barley extracellular 57.85 56.33
Os12t0154800-01 Rice extracellular 57.85 56.33
TraesCS3A01G012600.1 Wheat extracellular 57.85 56.33
TraesCS4B01G377100.1 Wheat extracellular 57.85 56.33
TraesCS4B01G377300.1 Wheat extracellular 57.85 56.33
TraesCS4B01G377400.1 Wheat extracellular 57.85 56.33
TraesCS5A01G543800.1 Wheat extracellular 57.85 56.33
TraesCSU01G128000.1 Wheat extracellular 57.85 56.33
TraesCSU01G128700.1 Wheat golgi 57.85 56.33
TraesCSU01G145300.1 Wheat extracellular 57.85 56.33
Zm00001d004401_P001 Maize extracellular 56.95 56.19
KRG94458 Soybean extracellular 55.16 56.16
TraesCS7B01G351800.1 Wheat extracellular 54.71 55.96
TraesCS7D01G440600.1 Wheat extracellular 54.71 55.96
TraesCS7D01G440700.1 Wheat extracellular 54.71 55.96
TraesCS6D01G039000.1 Wheat extracellular 55.16 55.91
Os12t0154700-01 Rice extracellular 57.4 55.9
TraesCS4B01G377000.1 Wheat extracellular 57.4 55.9
TraesCS4B01G378000.1 Wheat extracellular 57.4 55.9
TraesCS5A01G544000.1 Wheat extracellular 57.4 55.9
TraesCSU01G128100.1 Wheat extracellular 57.4 55.9
TraesCSU01G128300.1 Wheat extracellular 57.4 55.9
TraesCSU01G128500.1 Wheat extracellular 57.4 55.9
TraesCSU01G128600.1 Wheat extracellular 57.4 55.9
TraesCSU01G128800.1 Wheat extracellular 57.4 55.9
TraesCSU01G145700.1 Wheat extracellular 57.4 55.9
TraesCSU01G151900.1 Wheat extracellular 57.4 55.9
TraesCSU01G152000.1 Wheat extracellular 57.4 55.9
TraesCSU01G161300.1 Wheat extracellular 57.4 55.9
Os08t0188900-01 Rice plastid 54.71 55.71
TraesCSU01G245800.1 Wheat extracellular 55.61 55.61
TraesCS4B01G377700.1 Wheat extracellular 53.81 55.56
Zm00001d000012_P001 Maize extracellular 56.5 55.51
TraesCS7A01G452000.1 Wheat extracellular 54.26 55.5
TraesCS7D01G440900.1 Wheat extracellular 54.26 55.5
TraesCS7D01G441000.1 Wheat extracellular 54.26 55.5
Os12t0154900-00 Rice extracellular 56.95 55.46
TraesCS4B01G377900.1 Wheat extracellular 56.95 55.46
TraesCS5A01G544400.1 Wheat extracellular 56.95 55.46
HORVU0Hr1G009450.1 Barley extracellular 57.4 55.41
HORVU7Hr1G102000.2 Barley extracellular, vacuole 54.71 55.2
HORVU1Hr1G010640.1 Barley extracellular, vacuole 52.91 55.14
TraesCS4B01G376700.1 Wheat extracellular 31.39 55.12
TraesCS3B01G075600.1 Wheat extracellular 56.05 55.07
TraesCS3B01G075700.1 Wheat endoplasmic reticulum, extracellular 56.05 55.07
TraesCS7A01G451800.1 Wheat extracellular 53.81 55.05
TraesCS7B01G351600.1 Wheat extracellular 53.81 55.05
TraesCSU01G150700.1 Wheat extracellular 56.5 55.02
TraesCSU01G152900.1 Wheat extracellular 56.5 55.02
Os08t0189300-01 Rice extracellular 55.16 54.91
HORVU3Hr1G011990.3 Barley extracellular 56.95 54.74
KRG94453 Soybean extracellular 52.02 54.72
KRG94695 Soybean nucleus 52.02 54.72
TraesCS7B01G351500.1 Wheat extracellular 53.36 54.59
TraesCS7B01G351700.1 Wheat extracellular 53.36 54.59
EES11809 Sorghum extracellular 56.05 54.59
HORVU4Hr1G090120.1 Barley extracellular 56.05 54.59
Zm00001d049439_P001 Maize cytosol, peroxisome, plastid 34.98 54.55
AT3G04190.1 Thale cress extracellular, vacuole 54.26 54.5
TraesCS5B01G048500.1 Wheat extracellular 55.16 54.42
TraesCS5D01G054300.1 Wheat extracellular 55.16 54.42
Os08t0189200-01 Rice extracellular 54.71 54.22
TraesCS7A01G451700.1 Wheat extracellular 52.91 54.13
HORVU7Hr1G101990.1 Barley extracellular 54.26 54.02
Zm00001d025059_P001 Maize extracellular 54.71 53.74
HORVU5Hr1G010880.2 Barley extracellular 55.16 53.71
TraesCS6B01G047200.1 Wheat extracellular 52.91 53.64
HORVU0Hr1G009470.2 Barley plastid 57.85 53.31
TraesCS7B01G289600.1 Wheat endoplasmic reticulum, extracellular 56.05 53.19
TraesCS7D01G383300.1 Wheat extracellular 56.05 53.19
TraesCS5A01G044300.1 Wheat extracellular 55.61 52.77
KRG94061 Soybean extracellular, plasma membrane, vacuole 48.43 52.43
HORVU7Hr1G091800.1 Barley endoplasmic reticulum, extracellular, plastid 55.16 52.34
TraesCS7A01G386800.1 Wheat endoplasmic reticulum, extracellular 55.16 52.34
KRH07008 Soybean extracellular, plasma membrane, vacuole 50.22 52.09
HORVU4Hr1G090130.1 Barley endoplasmic reticulum, extracellular, plastid 57.4 52.03
GSMUA_Achr5P26700_001 Banana extracellular 41.7 51.96
Os08t0231400-01 Rice extracellular 52.02 51.79
PGSC0003DMT400044231 Potato extracellular 52.02 51.79
Solyc09g089990.2.1 Tomato extracellular 52.02 51.79
HORVU3Hr1G001990.1 Barley extracellular, plastid, vacuole 58.74 51.78
AT3G04170.1 Thale cress extracellular, vacuole 52.47 51.54
AT3G04180.1 Thale cress extracellular, vacuole 51.12 51.35
GSMUA_Achr9P30640_001 Banana extracellular, vacuole 52.47 50.0
TraesCSU01G152800.1 Wheat plastid 56.95 48.85
TraesCS1B01G069900.1 Wheat extracellular 57.4 48.3
TraesCS1B01G069600.1 Wheat extracellular 56.95 47.92
AT3G04150.2 Thale cress extracellular, vacuole 50.67 46.69
HORVU2Hr1G104240.1 Barley extracellular 54.71 46.39
PGSC0003DMT400044224 Potato extracellular 46.19 45.78
TraesCS4B01G378200.1 Wheat plastid 57.4 45.71
TraesCS2A01G459900.1 Wheat extracellular, vacuole 53.81 45.63
TraesCS2B01G481600.1 Wheat extracellular, vacuole 53.81 45.63
TraesCS4B01G378400.1 Wheat plastid 56.5 45.49
HORVU4Hr1G090190.4 Barley extracellular 56.95 45.36
GSMUA_Achr8P33380_001 Banana extracellular 45.74 45.33
TraesCS2D01G460200.1 Wheat extracellular, vacuole 53.36 45.25
HORVU2Hr1G104220.1 Barley extracellular 54.26 44.98
Solyc09g090040.2.1 Tomato extracellular 45.74 44.74
TraesCS2D01G460100.1 Wheat vacuole 53.81 44.44
TraesCS2A01G459800.1 Wheat vacuole 53.36 44.07
TraesCS2B01G481500.1 Wheat vacuole 53.36 44.07
EES12867 Sorghum extracellular, vacuole 51.57 43.73
Zm00001d002295_P001 Maize extracellular 51.12 43.35
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 60.54 31.69
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:833888ProteinID:AED94379.2ArrayExpress:AT5G38960EnsemblPlantsGene:AT5G38960
RefSeq:AT5G38960TAIR:AT5G38960RefSeq:AT5G38960-TAIR-GEnsemblPlants:AT5G38960.1TAIR:AT5G38960.1ProteinID:BAB08652.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0030145GO:GO:0030312GO:GO:0045735GO:GO:0046872GO:GO:0048046
InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710RefSeq:NP_198712.2PFAM:PF00190PO:PO:0007123
PO:PO:0009025PO:PO:0025022PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF91
UniProt:Q9FMA6InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000012B4D4SEG:seg:::
Description
Putative germin-like protein subfamily 1 member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA6]
Coordinates
chr5:+:15592922..15593963
Molecular Weight (calculated)
24153.3 Da
IEP (calculated)
8.691
GRAVY (calculated)
0.139
Length
223 amino acids
Sequence
(BLAST)
001: MNMKNLYLAI LYLLAASTLP FAIASDPSPL QDFCIGVNTP ANALFVNGKF CKDPKLVTAD DFYFSGLDKA RTTESSPVGS NVTTVNVNQI PGLNTLGISL
101: VRIDYGINGQ NPPHTHPRAT EILLVQEGTL FVGFFSSFPE NRLFNKTLNK GDVFVFPEGL IHFQVNIGKQ PAVAFASLSS QNPGVIIIGN TLFGSKPPID
201: PNVLAKAFQL DPKVIIQLQK KFG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.