Factsheet for TraesCS4B01G378200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
vacuole 2
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G378400.1	Wheat	plastid	98.21	99.28
TraesCSU01G128800.1	Wheat	extracellular	81.07	99.13
TraesCS4B01G378000.1	Wheat	extracellular	78.57	96.07
TraesCS4B01G377100.1	Wheat	extracellular	77.5	94.76
TraesCS4B01G377300.1	Wheat	extracellular	77.5	94.76
HORVU4Hr1G090120.1	Barley	extracellular	77.14	94.32
TraesCS4B01G377400.1	Wheat	extracellular	77.14	94.32
TraesCS4B01G377500.1	Wheat	extracellular	77.14	94.32
TraesCS4B01G377900.1	Wheat	extracellular	77.14	94.32
TraesCS4B01G377000.1	Wheat	extracellular	76.43	93.45
TraesCS4B01G377700.1	Wheat	extracellular	71.79	93.06
TraesCS4B01G377200.1	Wheat	extracellular	76.07	93.01
TraesCS4B01G376900.1	Wheat	extracellular	74.64	92.89
TraesCS4B01G377800.1	Wheat	extracellular	75.36	92.14
TraesCS4B01G376700.1	Wheat	extracellular	41.07	90.55
Os08t0189400-01	Rice	extracellular	70.71	88.39
Os08t0190100-01	Rice	extracellular	70.36	87.95
Os08t0189900-01	Rice	extracellular	70.0	87.5
Os08t0189700-01	Rice	extracellular	69.64	87.05
Os08t0189500-01	Rice	extracellular	69.29	86.22
Os08t0189600-01	Rice	extracellular	69.29	86.22
Os08t0189850-01	Rice	extracellular	68.93	86.16
OQU80013	Sorghum	cytosol, extracellular, peroxisome	58.57	82.83
EES13478	Sorghum	extracellular	67.14	82.46
KXG24637	Sorghum	extracellular	67.14	82.46
OQU80014	Sorghum	extracellular	67.14	82.46
OQU80017	Sorghum	extracellular	67.14	82.46
OQU80021	Sorghum	extracellular	67.14	82.46
Os08t0189100-01	Rice	extracellular	65.0	82.35
TraesCS7B01G374800.1	Wheat	extracellular	66.43	82.3
TraesCS7B01G374900.1	Wheat	extracellular	66.43	82.3
EES13474	Sorghum	extracellular	66.79	82.02
OQU80024	Sorghum	extracellular	66.79	82.02
Zm00001d049418_P001	Maize	extracellular	66.79	82.02
Zm00001d049419_P001	Maize	extracellular	66.79	82.02
Zm00001d049420_P001	Maize	extracellular	66.79	82.02
Zm00001d049427_P001	Maize	extracellular, plastid	66.79	82.02
Zm00001d049437_P001	Maize	extracellular	66.79	82.02
Zm00001d000006_P001	Maize	extracellular	65.71	81.78
Zm00001d049428_P001	Maize	extracellular, plastid	66.79	81.66
EES13468	Sorghum	extracellular	66.43	81.58
EES13470	Sorghum	extracellular	66.43	81.58
OQU80018	Sorghum	extracellular	66.43	81.58
OQU80022	Sorghum	extracellular	66.43	81.58
Zm00001d049431_P001	Maize	extracellular, plastid	66.43	81.58
Zm00001d049432_P001	Maize	extracellular, plastid	66.43	81.58
Zm00001d049433_P001	Maize	extracellular	66.43	81.58
Zm00001d049436_P001	Maize	extracellular, plastid	66.43	81.58
Zm00001d049438_P001	Maize	extracellular	64.64	81.53
Zm00001d049435_P001	Maize	extracellular	66.43	81.22
OQU80011	Sorghum	extracellular	66.07	81.14
Zm00001d049421_P001	Maize	extracellular, plastid	66.07	80.79
Zm00001d049423_P001	Maize	extracellular	66.07	80.79
Zm00001d049430_P001	Maize	extracellular, plastid	65.71	80.7
EES13475	Sorghum	extracellular	61.43	80.0
Zm00001d049439_P001	Maize	cytosol, peroxisome, plastid	40.36	79.02
Os08t0188900-01	Rice	plastid	61.79	79.0
Zm00001d049426_P001	Maize	plastid	44.29	77.5
VIT_14s0128g01040.t01	Wine grape	peroxisome	33.21	75.61
TraesCS5B01G048500.1	Wheat	extracellular	58.57	72.57
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	50.36	72.31
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	55.71	71.89
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	55.71	71.89
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	55.36	71.43
TraesCS3B01G075600.1	Wheat	extracellular	56.79	70.04
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	53.57	69.77
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	53.57	69.77
GSMUA_Achr5P26710_001	Banana	cytosol	50.0	69.65
TraesCS3B01G075700.1	Wheat	endoplasmic reticulum, extracellular	56.43	69.6
TraesCS1B01G070100.1	Wheat	extracellular, vacuole	53.21	69.3
TraesCS1B01G070300.1	Wheat	extracellular, vacuole	52.86	68.84
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	50.36	68.78
VIT_14s0060g02700.t01	Wine grape	cytosol	51.43	67.92
TraesCS2B01G387100.1	Wheat	extracellular, vacuole	52.14	67.91
VIT_14s0006g02430.t01	Wine grape	extracellular	52.86	67.89
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	53.21	67.73
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	53.21	67.73
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	47.5	67.51
VIT_14s0006g02380.t01	Wine grape	extracellular	52.5	67.43
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	53.21	67.42
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	52.86	67.27
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	52.86	67.27
VIT_14s0006g02350.t01	Wine grape	extracellular	52.86	66.97
VIT_14s0006g02370.t01	Wine grape	extracellular	52.86	66.97
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	52.86	66.97
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	52.86	66.97
VIT_14s0060g02730.t01	Wine grape	peroxisome	49.29	66.67
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	52.5	66.52
VIT_14s0006g02390.t01	Wine grape	extracellular	52.5	66.52
TraesCS7B01G289600.1	Wheat	endoplasmic reticulum, extracellular	55.71	66.38
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	52.14	66.36
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	52.14	66.36
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	52.14	66.36
VIT_16s0039g02920.t01	Wine grape	plastid	43.57	66.3
TraesCS2B01G083400.1	Wheat	extracellular, vacuole	41.79	66.1
TraesCS7B01G351800.1	Wheat	extracellular	51.43	66.06
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	52.86	65.78
VIT_12s0059g00730.t01	Wine grape	extracellular	50.71	65.74
TraesCS7B01G351600.1	Wheat	extracellular	50.71	65.14
TraesCS6B01G047200.1	Wheat	extracellular	51.07	65.0
VIT_16s0013g00010.t01	Wine grape	extracellular	52.14	64.89
KRG92599	Soybean	extracellular	51.43	64.86
GSMUA_Achr5P26700_001	Banana	extracellular	41.43	64.8
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	49.64	64.65
VIT_14s0128g00650.t01	Wine grape	extracellular	50.71	64.55
KRH07003	Soybean	extracellular	50.71	64.25
TraesCS7B01G351500.1	Wheat	extracellular	50.0	64.22
VIT_16s0013g00060.t01	Wine grape	extracellular	51.43	64.0
VIT_16s0039g02860.t01	Wine grape	extracellular	51.43	64.0
TraesCS7B01G351700.1	Wheat	extracellular	49.64	63.76
VIT_14s0060g02690.t01	Wine grape	extracellular	50.0	63.64
PGSC0003DMT400040093	Potato	extracellular	51.79	63.6
KRG94046	Soybean	extracellular	41.07	63.54
KRG94060	Soybean	extracellular	50.0	63.35
KRG94062	Soybean	extracellular	50.0	63.35
KRG94063	Soybean	extracellular	50.0	63.35
KRG94068	Soybean	extracellular	50.0	63.35
KRG94455	Soybean	extracellular	50.0	63.35
PGSC0003DMT400053423	Potato	extracellular	51.43	63.16
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	50.71	63.11
KRG94454	Soybean	extracellular	49.64	62.9
KRG94457	Soybean	extracellular	49.64	62.9
KRH07002	Soybean	extracellular	49.64	62.9
Solyc01g102900.2.1	Tomato	extracellular	51.07	62.72
Solyc10g078840.1.1	Tomato	extracellular	48.57	62.67
KRH42281	Soybean	extracellular	47.86	62.33
VIT_12s0059g00720.t01	Wine grape	plastid	35.0	62.03
KRH58405	Soybean	vacuole	47.5	61.86
PGSC0003DMT400046992	Potato	extracellular	50.36	61.84
PGSC0003DMT400029687	Potato	extracellular	47.86	61.75
VIT_10s0003g05260.t01	Wine grape	extracellular	47.5	61.57
KRH11811	Soybean	extracellular	47.14	61.4
VIT_10s0003g05250.t01	Wine grape	extracellular	47.14	61.4
KRG92598	Soybean	extracellular	50.71	61.21
KRH34184	Soybean	extracellular	50.71	61.21
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	36.79	60.95
Bra039727.1-P	Field mustard	extracellular	47.86	60.91
CDY36875	Canola	extracellular, vacuole	47.86	60.91
CDY53728	Canola	extracellular	47.86	60.91
KRH07001	Soybean	extracellular	47.86	60.91
PGSC0003DMT400046891	Potato	extracellular	50.0	60.87
PGSC0003DMT400029689	Potato	extracellular	47.14	60.83
AT5G39150.1	Thale cress	extracellular	47.86	60.63
AT5G39180.1	Thale cress	extracellular	47.86	60.63
KRH34183	Soybean	extracellular	42.86	60.61
CDY36876	Canola	extracellular	47.5	60.45
AT5G39120.1	Thale cress	extracellular	47.5	60.18
KRH07007	Soybean	extracellular	47.5	60.18
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.86	60.09
CDX99669	Canola	vacuole	47.86	60.09
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	47.86	60.09
CDY15957	Canola	vacuole	47.86	60.09
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	48.93	60.09
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	47.5	59.91
CDY66959	Canola	extracellular	46.79	59.82
CDY69461	Canola	extracellular	40.71	59.69
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.5	59.64
PGSC0003DMT400046887	Potato	extracellular	48.93	59.57
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	46.43	59.36
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	46.43	59.36
KRH36828	Soybean	extracellular	45.71	58.99
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	46.07	58.9
KRH07008	Soybean	extracellular, plasma membrane, vacuole	45.0	58.6
AT5G39130.1	Thale cress	extracellular	46.43	58.56
AT5G39160.1	Thale cress	extracellular, vacuole	46.43	58.56
AT5G39190.1	Thale cress	extracellular, vacuole	46.43	58.56
KRG94458	Soybean	extracellular	45.71	58.45
AT4G14630.1	Thale cress	extracellular	46.07	58.11
Solyc10g078850.1.1	Tomato	extracellular	43.57	58.1
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	47.5	58.08
KRG94453	Soybean	extracellular	43.93	58.02
AT5G38930.1	Thale cress	extracellular	45.71	57.4
AT5G38960.1	Thale cress	extracellular	45.71	57.4
Bra028225.1-P	Field mustard	extracellular, vacuole	45.36	57.21
CDX74487	Canola	extracellular, vacuole	45.36	57.21
CDY37880	Canola	extracellular	45.36	57.21
VIT_14s0128g00970.t01	Wine grape	vacuole	52.14	57.03
KRG94695	Soybean	nucleus	42.86	56.6
TraesCS1B01G069900.1	Wheat	extracellular	52.86	55.85
TraesCS1B01G069600.1	Wheat	extracellular	52.5	55.47
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.36	55.46
CDY18834	Canola	extracellular, plasma membrane, vacuole	45.36	55.46
KRG94061	Soybean	extracellular, plasma membrane, vacuole	40.71	55.34
Bra027979.1-P	Field mustard	extracellular	38.93	55.33
CDX95190	Canola	extracellular	38.93	55.33
AT3G04200.1	Thale cress	extracellular, vacuole	43.57	53.74
Bra028424.1-P	Field mustard	extracellular, vacuole	41.79	53.18
CDX67421	Canola	extracellular, vacuole	41.79	53.18
AT5G38940.2	Thale cress	plastid	46.43	52.63
TraesCS2B01G481600.1	Wheat	extracellular, vacuole	49.29	52.47
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	46.79	52.19
TraesCS2B01G481500.1	Wheat	vacuole	49.29	51.11
AT3G04190.1	Thale cress	extracellular, vacuole	39.64	50.0
PGSC0003DMT400044231	Potato	extracellular	40.0	50.0
Solyc09g089990.2.1	Tomato	extracellular	39.64	49.55
AT3G04180.1	Thale cress	extracellular, vacuole	38.57	48.65
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.0	48.07
CDX99677	Canola	extracellular, vacuole	46.79	47.64
AT3G04170.1	Thale cress	extracellular, vacuole	38.57	47.58
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	31.79	45.88
AT3G04150.2	Thale cress	extracellular, vacuole	38.93	45.04
PGSC0003DMT400044224	Potato	extracellular	33.93	42.22
Solyc09g090040.2.1	Tomato	extracellular	33.93	41.67
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	56.79	37.32
PGSC0003DMT400087849	Potato	extracellular	47.86	31.24

Protein Annotations

EnsemblPlants:TraesCS4B01G378200.1	EnsemblPlantsGene:TraesCS4B01G378200	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF94	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4B:-:660416287..660417267

Molecular Weight (calculated)

30564.7 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.041

Length

280 amino acids

Sequence
(BLAST)

001: MGCSFPLDYV HCPQVHTARC AYINTCFPCI LKPSLTHRKT REKKSERSSN RMASSPSFLL LAALLALVSW QAVASDPGPL QDFCVADMNS PVRVNGFVCK
101: NPVEVNADDF FKAAALDKPR VTNKVGSNVT LINVMQIAGL NTLGISIARI DYAPLGQNPP HTHPRATEIL TVLEGTLYVG FVTSNQPAPN RNKFLSKVLN
201: KGDVFVFPVG LIHFQFNPNP HKPAVAIAAL SSQNPGAITI ANAVFGSDPQ ISDDVLAKAF QVEKNTIDWL QAQFWENNHN

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.