Factsheet for TraesCS3B01G075600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 19786127

msms PMID: 19786127 doi

FJ Kong, A Oyanagi, S Komatsu

National Institute of Crop Science, Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G075700.1	Wheat	endoplasmic reticulum, extracellular	99.56	99.56
HORVU3Hr1G011990.3	Barley	extracellular	95.59	93.53
TraesCS5B01G048500.1	Wheat	extracellular	90.31	90.71
TraesCS7B01G289600.1	Wheat	endoplasmic reticulum, extracellular	93.39	90.21
EES11809	Sorghum	extracellular	82.82	82.1
Zm00001d025059_P001	Maize	extracellular	81.06	81.06
Os08t0189300-01	Rice	extracellular	79.74	80.8
Zm00001d004401_P001	Maize	extracellular	80.18	80.53
Os08t0231400-01	Rice	extracellular	77.09	78.12
Os08t0189200-01	Rice	extracellular	77.09	77.78
TraesCS4B01G376900.1	Wheat	extracellular	70.04	70.67
TraesCS7B01G374800.1	Wheat	extracellular	70.04	70.35
TraesCS7B01G374900.1	Wheat	extracellular	70.04	70.35
TraesCS4B01G377100.1	Wheat	extracellular	70.93	70.31
TraesCS4B01G377300.1	Wheat	extracellular	70.93	70.31
TraesCS4B01G377000.1	Wheat	extracellular	70.48	69.87
TraesCS4B01G377400.1	Wheat	extracellular	70.48	69.87
TraesCS4B01G377200.1	Wheat	extracellular	70.04	69.43
TraesCS4B01G378000.1	Wheat	extracellular	70.04	69.43
TraesCS4B01G377800.1	Wheat	extracellular	69.6	69.0
TraesCS4B01G377500.1	Wheat	extracellular	69.16	68.56
TraesCS4B01G377900.1	Wheat	extracellular	67.84	67.25
TraesCS4B01G377700.1	Wheat	extracellular	63.88	67.13
TraesCS4B01G376700.1	Wheat	extracellular	37.44	66.93
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	62.56	65.44
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	62.56	65.44
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	55.95	65.13
VIT_14s0128g01040.t01	Wine grape	peroxisome	35.24	65.04
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	61.67	64.52
VIT_14s0060g02700.t01	Wine grape	cytosol	58.59	62.74
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	55.95	61.95
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	58.59	61.86
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	58.59	61.86
GSMUA_Achr5P26710_001	Banana	cytosol	54.63	61.69
TraesCS1B01G070100.1	Wheat	extracellular, vacuole	58.15	61.4
KRG92599	Soybean	extracellular	59.91	61.26
TraesCS1B01G070300.1	Wheat	extracellular, vacuole	57.71	60.93
TraesCS2B01G387100.1	Wheat	extracellular, vacuole	57.71	60.93
VIT_16s0013g00010.t01	Wine grape	extracellular	60.35	60.89
VIT_16s0039g02920.t01	Wine grape	plastid	49.34	60.87
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	59.03	60.63
VIT_14s0006g02380.t01	Wine grape	extracellular	58.15	60.55
VIT_14s0006g02430.t01	Wine grape	extracellular	58.15	60.55
VIT_16s0013g00060.t01	Wine grape	extracellular	59.91	60.44
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	52.42	60.41
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	58.59	60.18
VIT_14s0006g02350.t01	Wine grape	extracellular	58.59	60.18
VIT_14s0006g02370.t01	Wine grape	extracellular	58.59	60.18
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	58.59	60.18
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	58.15	60.0
VIT_16s0039g02860.t01	Wine grape	extracellular	59.47	60.0
VIT_14s0006g02390.t01	Wine grape	extracellular	58.15	59.73
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	57.71	59.55
GSMUA_Achr5P26700_001	Banana	extracellular	46.7	59.22
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	57.27	59.09
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	57.27	59.09
VIT_14s0060g02730.t01	Wine grape	peroxisome	53.74	58.94
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	57.27	58.82
Solyc01g102900.2.1	Tomato	extracellular	59.03	58.77
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	58.15	58.67
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	56.83	58.64
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	56.83	58.64
PGSC0003DMT400040093	Potato	extracellular	58.59	58.33
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	57.71	58.22
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	56.39	58.18
KRH34183	Soybean	extracellular	50.66	58.08
PGSC0003DMT400053423	Potato	extracellular	58.15	57.89
VIT_10s0003g05260.t01	Wine grape	extracellular	55.07	57.87
VIT_12s0059g00730.t01	Wine grape	extracellular	55.07	57.87
VIT_14s0128g00650.t01	Wine grape	extracellular	55.95	57.73
VIT_10s0003g05250.t01	Wine grape	extracellular	54.63	57.67
KRG94454	Soybean	extracellular	55.95	57.47
KRG94457	Soybean	extracellular	55.95	57.47
KRG94046	Soybean	extracellular	45.81	57.46
KRG92598	Soybean	extracellular	58.59	57.33
KRH34184	Soybean	extracellular	58.59	57.33
VIT_14s0060g02690.t01	Wine grape	extracellular	55.51	57.27
KRH42281	Soybean	extracellular	54.19	57.21
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	54.19	57.21
AT5G39150.1	Thale cress	extracellular	55.51	57.01
AT5G39180.1	Thale cress	extracellular	55.51	57.01
KRG94455	Soybean	extracellular	55.51	57.01
TraesCS4B01G378200.1	Wheat	plastid	70.04	56.79
KRH58405	Soybean	vacuole	53.74	56.74
Solyc10g078840.1.1	Tomato	extracellular	54.19	56.68
PGSC0003DMT400046992	Potato	extracellular	56.83	56.58
AT5G39120.1	Thale cress	extracellular	55.07	56.56
KRG94060	Soybean	extracellular	55.07	56.56
KRG94062	Soybean	extracellular	55.07	56.56
KRG94063	Soybean	extracellular	55.07	56.56
KRG94068	Soybean	extracellular	55.07	56.56
KRH07003	Soybean	extracellular	55.07	56.56
TraesCS4B01G378400.1	Wheat	plastid	68.72	56.32
KRH11811	Soybean	extracellular	53.3	56.28
PGSC0003DMT400029687	Potato	extracellular	53.74	56.22
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	54.19	56.16
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	54.19	56.16
KRH07002	Soybean	extracellular	54.63	56.11
AT5G38960.1	Thale cress	extracellular	55.07	56.05
TraesCS7B01G351800.1	Wheat	extracellular	53.74	55.96
TraesCS2B01G083400.1	Wheat	extracellular, vacuole	43.61	55.93
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	54.63	55.86
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	53.74	55.71
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	55.95	55.7
VIT_12s0059g00720.t01	Wine grape	plastid	38.77	55.7
PGSC0003DMT400046891	Potato	extracellular	56.39	55.65
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	41.41	55.62
TraesCS7B01G351700.1	Wheat	extracellular	53.3	55.5
CDY66959	Canola	extracellular	53.3	55.25
Bra028225.1-P	Field mustard	extracellular, vacuole	53.74	54.95
CDX74487	Canola	extracellular, vacuole	53.74	54.95
PGSC0003DMT400029689	Potato	extracellular	52.42	54.84
PGSC0003DMT400046887	Potato	extracellular	55.51	54.78
Solyc10g078850.1.1	Tomato	extracellular	50.66	54.76
TraesCS7B01G351600.1	Wheat	extracellular	52.42	54.59
CDY37880	Canola	extracellular	53.3	54.5
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	54.63	54.15
TraesCS7B01G351500.1	Wheat	extracellular	51.98	54.13
KRH07001	Soybean	extracellular	52.42	54.09
TraesCS6B01G047200.1	Wheat	extracellular	52.42	54.09
KRH07007	Soybean	extracellular	52.42	53.85
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.86	53.81
CDX99669	Canola	vacuole	52.86	53.81
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	52.86	53.81
CDY15957	Canola	vacuole	52.86	53.81
Bra039727.1-P	Field mustard	extracellular	51.98	53.64
CDY36875	Canola	extracellular, vacuole	51.98	53.64
CDY53728	Canola	extracellular	51.98	53.64
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.42	53.36
CDY36876	Canola	extracellular	51.54	53.18
AT5G39130.1	Thale cress	extracellular	51.98	53.15
AT5G39160.1	Thale cress	extracellular, vacuole	51.98	53.15
AT5G39190.1	Thale cress	extracellular, vacuole	51.98	53.15
KRH36828	Soybean	extracellular	50.66	53.0
KRG94458	Soybean	extracellular	51.1	52.97
AT5G38930.1	Thale cress	extracellular	51.98	52.91
KRH07008	Soybean	extracellular, plasma membrane, vacuole	49.78	52.56
KRG94453	Soybean	extracellular	48.9	52.36
Bra027979.1-P	Field mustard	extracellular	45.37	52.28
CDX95190	Canola	extracellular	45.37	52.28
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	51.98	51.53
CDY18834	Canola	extracellular, plasma membrane, vacuole	51.98	51.53
KRG94695	Soybean	nucleus	48.02	51.42
AT4G14630.1	Thale cress	extracellular	50.22	51.35
CDY69461	Canola	extracellular	43.17	51.31
VIT_14s0128g00970.t01	Wine grape	vacuole	57.27	50.78
TraesCS1B01G069900.1	Wheat	extracellular	58.15	49.81
AT3G04200.1	Thale cress	extracellular, vacuole	49.78	49.78
Bra028424.1-P	Field mustard	extracellular, vacuole	48.02	49.55
CDX67421	Canola	extracellular, vacuole	48.02	49.55
KRG94061	Soybean	extracellular, plasma membrane, vacuole	44.93	49.51
TraesCS1B01G069600.1	Wheat	extracellular	57.71	49.43
AT5G38940.2	Thale cress	plastid	52.42	48.18
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	52.86	47.81
AT3G04170.1	Thale cress	extracellular, vacuole	44.93	44.93
TraesCS2B01G481600.1	Wheat	extracellular, vacuole	51.98	44.87
PGSC0003DMT400044231	Potato	extracellular	44.05	44.64
Solyc09g089990.2.1	Tomato	extracellular	44.05	44.64
PGSC0003DMT400044224	Potato	extracellular	44.05	44.44
CDX99677	Canola	extracellular, vacuole	53.3	44.0
Solyc09g090040.2.1	Tomato	extracellular	44.05	43.86
TraesCS2B01G481500.1	Wheat	vacuole	51.98	43.7
AT3G04180.1	Thale cress	extracellular, vacuole	42.73	43.69
AT3G04190.1	Thale cress	extracellular, vacuole	42.73	43.69
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.05	42.92
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	34.8	40.72
AT3G04150.2	Thale cress	extracellular, vacuole	42.29	39.67
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	63.44	33.8
PGSC0003DMT400087849	Potato	extracellular	54.19	28.67

Protein Annotations

EnsemblPlants:TraesCS3B01G075600.1	EnsemblPlantsGene:TraesCS3B01G075600	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF38	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3B:-:46468769..46469639

Molecular Weight (calculated)

24699.5 Da

IEP (calculated)

7.143

GRAVY (calculated)

0.056

Length

227 amino acids

Sequence
(BLAST)

001: MASSTSSFHL LAVLLALASW QASAYDPSPL QDFCIADMKS PVRVNGFACK DPMAASSDDF FNPAMLDKAR DTKASKVRSN VTNINVINFP GLNTLGISLA
101: RIDYGPLGVN TPHIHPRATE LLTVLEGTLY LGFVTSNPNR LFSKIVTKGD VFVFPKAMIH FQMNLAHDKP AAALSSLSSQ NPGVISIANA VFGSKPPISD
201: DVLATAFQVE KDLIHWLQSQ FWENNNY

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.