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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 extracellular: 24083427
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0189200-01 Rice extracellular 90.18 89.78
Os08t0231400-01 Rice extracellular 86.16 86.16
EES11809 Sorghum extracellular 85.27 83.41
TraesCS5B01G048500.1 Wheat extracellular 83.48 82.74
TraesCS5D01G054300.1 Wheat extracellular 83.04 82.3
Zm00001d004401_P001 Maize extracellular 83.04 82.3
HORVU5Hr1G010880.2 Barley extracellular 83.04 81.22
Zm00001d025059_P001 Maize extracellular 81.7 80.62
TraesCS3B01G075600.1 Wheat extracellular 80.8 79.74
TraesCS3B01G075700.1 Wheat endoplasmic reticulum, extracellular 80.36 79.3
TraesCS5A01G044300.1 Wheat extracellular 83.04 79.15
HORVU3Hr1G011990.3 Barley extracellular 79.46 76.72
TraesCS7B01G289600.1 Wheat endoplasmic reticulum, extracellular 80.36 76.6
TraesCS7D01G383300.1 Wheat extracellular 80.36 76.6
Os08t0189400-01 Rice extracellular 75.89 75.89
HORVU7Hr1G091800.1 Barley endoplasmic reticulum, extracellular, plastid 79.46 75.74
TraesCS7A01G386800.1 Wheat endoplasmic reticulum, extracellular 79.02 75.32
Os08t0189900-01 Rice extracellular 73.66 73.66
Os08t0189500-01 Rice extracellular 73.21 72.89
Os08t0189600-01 Rice extracellular 73.21 72.89
Os08t0189700-01 Rice extracellular 72.77 72.77
Os08t0190100-01 Rice extracellular 72.77 72.77
Os08t0189100-01 Rice extracellular 71.43 72.4
Os08t0189850-01 Rice extracellular 71.88 71.88
Os08t0188900-01 Rice plastid 68.75 70.32
VIT_14s0128g01040.t01 Wine grape peroxisome 37.5 68.29
GSMUA_Achr5P26690_001 Banana extracellular, vacuole 58.48 67.18
Os12t0154700-01 Rice extracellular 67.86 66.38
Os12t0154800-01 Rice extracellular 67.86 66.38
GSMUA_Achr5P26730_001 Banana extracellular, vacuole 63.39 65.44
GSMUA_Achr5P26750_001 Banana extracellular, vacuole 63.39 65.44
VIT_14s0006g02360.t01 Wine grape cytosol, plastid 59.38 64.88
Os12t0155000-01 Rice cytosol, extracellular, vacuole 56.25 64.62
GSMUA_Achr5P26760_001 Banana extracellular, vacuole 62.5 64.52
VIT_14s0006g02420.t01 Wine grape extracellular, vacuole 62.95 63.8
VIT_14s0006g02380.t01 Wine grape extracellular 62.05 63.76
Os12t0154900-00 Rice extracellular 65.18 63.76
VIT_16s0039g02920.t01 Wine grape plastid 52.23 63.59
VIT_14s0006g02330.t01 Wine grape extracellular, vacuole 62.5 63.35
VIT_14s0006g02350.t01 Wine grape extracellular 62.5 63.35
VIT_14s0006g02370.t01 Wine grape extracellular 62.5 63.35
VIT_14s0006g02440.t01 Wine grape extracellular, vacuole 62.5 63.35
VIT_14s0006g02430.t01 Wine grape extracellular 61.61 63.3
VIT_14s0060g02700.t01 Wine grape cytosol 59.82 63.21
GSMUA_Achr5P26710_001 Banana cytosol 56.7 63.18
VIT_14s0006g02390.t01 Wine grape extracellular 62.05 62.9
Os02t0491600-00 Rice extracellular 60.27 62.5
VIT_16s0013g00010.t01 Wine grape extracellular 62.5 62.22
VIT_16s0013g00060.t01 Wine grape extracellular 62.5 62.22
VIT_14s0060g02730.t01 Wine grape peroxisome 57.14 61.84
VIT_14s0128g00650.t01 Wine grape extracellular 60.71 61.82
VIT_16s0039g02860.t01 Wine grape extracellular 61.16 60.89
VIT_14s0128g00920.t01 Wine grape extracellular, vacuole 59.82 60.63
Os02t0491800-00 Rice extracellular 60.27 60.54
VIT_14s0060g02710.t01 Wine grape extracellular, vacuole 53.12 60.41
KRG92599 Soybean extracellular 59.82 60.36
GSMUA_Achr5P26700_001 Banana extracellular 48.21 60.34
VIT_14s0128g01030.t01 Wine grape extracellular, vacuole 58.93 60.0
PGSC0003DMT400040093 Potato extracellular 60.71 59.65
PGSC0003DMT400053423 Potato extracellular 60.71 59.65
Os02t0491700-00 Rice extracellular 59.38 59.64
VIT_14s0060g02690.t01 Wine grape extracellular 58.48 59.55
VIT_14s0060g02750.t01 Wine grape extracellular, vacuole 58.48 59.55
VIT_14s0128g00990.t01 Wine grape extracellular, vacuole 58.48 59.55
VIT_12s0059g00730.t01 Wine grape extracellular 57.14 59.26
Solyc01g102900.2.1 Tomato extracellular 60.27 59.21
VIT_14s0128g01000.t01 Wine grape extracellular, vacuole 59.38 59.11
VIT_14s0060g02760.t01 Wine grape extracellular, vacuole 58.04 59.09
VIT_14s0128g01020.t01 Wine grape extracellular, vacuole 58.04 59.09
KRH58405 Soybean vacuole 56.7 59.07
KRH07002 Soybean extracellular 58.04 58.82
KRH07003 Soybean extracellular 58.04 58.82
PGSC0003DMT400046992 Potato extracellular 59.82 58.77
VIT_14s0128g00980.t01 Wine grape extracellular, vacuole 57.59 58.64
KRH42281 Soybean extracellular 56.25 58.6
VIT_10s0003g05300.t01 Wine grape extracellular, vacuole 56.25 58.6
KRG94060 Soybean extracellular 57.59 58.37
KRG94062 Soybean extracellular 57.59 58.37
KRG94063 Soybean extracellular 57.59 58.37
KRG94068 Soybean extracellular 57.59 58.37
VIT_16s0013g00090.t01 Wine grape extracellular, vacuole 59.38 58.33
VIT_14s0128g00690.t01 Wine grape extracellular, plasma membrane, vacuole 58.48 58.22
VIT_14s0128g01010.t01 Wine grape extracellular, vacuole 57.14 58.18
KRG94046 Soybean extracellular 46.88 58.01
KRG94455 Soybean extracellular 57.14 57.92
KRG94454 Soybean extracellular 56.7 57.47
KRG94457 Soybean extracellular 56.7 57.47
KRG92598 Soybean extracellular 59.38 57.33
KRH34184 Soybean extracellular 59.38 57.33
AT5G39150.1 Thale cress extracellular 56.25 57.01
AT5G39180.1 Thale cress extracellular 56.25 57.01
KRH07007 Soybean extracellular 56.25 57.01
KRH07001 Soybean extracellular 55.8 56.82
AT3G05950.1 Thale cress extracellular, plasma membrane, vacuole 58.04 56.77
KRH11811 Soybean extracellular 54.46 56.74
VIT_10s0003g05250.t01 Wine grape extracellular 54.46 56.74
Solyc10g078840.1.1 Tomato extracellular 54.91 56.68
CDY66959 Canola extracellular 55.36 56.62
AT5G39120.1 Thale cress extracellular 55.8 56.56
Bra020560.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 56.25 56.5
CDX99669 Canola vacuole 56.25 56.5
CDY05545 Canola endoplasmic reticulum, extracellular, vacuole 56.25 56.5
CDY15957 Canola vacuole 56.25 56.5
VIT_10s0003g05260.t01 Wine grape extracellular 54.46 56.48
Bra039727.1-P Field mustard extracellular 55.36 56.36
CDY36875 Canola extracellular, vacuole 55.36 56.36
CDY53728 Canola extracellular 55.36 56.36
AT5G39110.1 Thale cress endoplasmic reticulum, extracellular, vacuole 55.8 56.31
KRH07008 Soybean extracellular, plasma membrane, vacuole 54.02 56.28
PGSC0003DMT400029687 Potato extracellular 54.46 56.22
PGSC0003DMT400029689 Potato extracellular 54.46 56.22
KRG94458 Soybean extracellular 54.91 56.16
PGSC0003DMT400046891 Potato extracellular 57.59 56.09
Bra030358.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 55.8 56.05
CDY36876 Canola extracellular 54.91 55.91
AT5G39160.1 Thale cress extracellular, vacuole 55.36 55.86
Bra028467.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 54.46 55.71
CDY11695 Canola endoplasmic reticulum, extracellular, vacuole 54.46 55.71
CDY69099 Canola endoplasmic reticulum, extracellular, vacuole 54.46 55.71
VIT_12s0059g00720.t01 Wine grape plastid 39.29 55.7
KRG94453 Soybean extracellular 52.68 55.66
KRG94695 Soybean nucleus 52.68 55.66
PGSC0003DMT400046879 Potato cytosol, extracellular, plastid, vacuole 41.96 55.62
AT5G39190.1 Thale cress extracellular, vacuole 54.91 55.41
PGSC0003DMT400046887 Potato extracellular 56.7 55.22
AT5G38960.1 Thale cress extracellular 54.91 55.16
KRH34183 Soybean extracellular 48.66 55.05
AT5G39130.1 Thale cress extracellular 54.46 54.95
Bra028225.1-P Field mustard extracellular, vacuole 54.46 54.95
CDX74487 Canola extracellular, vacuole 54.46 54.95
CDY37880 Canola extracellular 54.46 54.95
KRH36828 Soybean extracellular 53.12 54.84
Solyc10g078850.1.1 Tomato extracellular 51.34 54.76
AT5G38930.1 Thale cress extracellular 54.46 54.71
Bra040243.1-P Field mustard extracellular, plasma membrane, vacuole 55.8 54.59
CDY18834 Canola extracellular, plasma membrane, vacuole 55.8 54.59
CDY69461 Canola extracellular 45.98 53.93
AT4G14630.1 Thale cress extracellular 52.68 53.15
AT3G04200.1 Thale cress extracellular, vacuole 52.68 51.98
Bra028424.1-P Field mustard extracellular, vacuole 50.45 51.36
CDX67421 Canola extracellular, vacuole 50.45 51.36
Bra027979.1-P Field mustard extracellular 45.09 51.27
CDX95190 Canola extracellular 45.09 51.27
KRG94061 Soybean extracellular, plasma membrane, vacuole 46.88 50.97
VIT_14s0128g00970.t01 Wine grape vacuole 58.04 50.78
AT5G38940.2 Thale cress plastid 54.91 49.8
Bra025428.1-P Field mustard cytosol, extracellular, vacuole 54.46 48.61
Solyc09g090040.2.1 Tomato extracellular 48.66 47.81
PGSC0003DMT400044224 Potato extracellular 47.77 47.56
AT3G04170.1 Thale cress extracellular, vacuole 46.88 46.26
Solyc09g089990.2.1 Tomato extracellular 45.54 45.54
PGSC0003DMT400044231 Potato extracellular 45.09 45.09
AT3G04180.1 Thale cress extracellular, vacuole 44.64 45.05
CDX99677 Canola extracellular, vacuole 54.91 44.73
Bra001097.1-P Field mustard extracellular, plasma membrane, vacuole 46.43 44.64
AT3G04190.1 Thale cress extracellular, vacuole 44.2 44.59
CDX74197 Canola cytosol, extracellular, plastid, vacuole 37.05 42.78
AT3G04150.2 Thale cress extracellular, vacuole 43.75 40.5
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 63.84 33.57
PGSC0003DMT400087849 Potato extracellular 55.36 28.9
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:4344840EMBL:AF032971EMBL:AK059338ProteinID:BAD05731.1
ProteinID:BAD05770.1ProteinID:BAF23072.1ProteinID:BAT04151.1InterPro:Cupin_1ProteinID:EAZ41760.1GO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0030145
GO:GO:0030312GO:GO:0045735GO:GO:0046872GO:GO:0048046InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710EnsemblPlantsGene:Os08g0189300EnsemblPlants:Os08t0189300-01PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
PANTHER:PTHR31238PANTHER:PTHR31238:SF38UniProt:Q6YZZ6InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835
SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI000009FE34RefSeq:XP_015650202.1SEG:seg:
Description
GERMIN-LIKE PROTEIN 8-4Germin-like protein 8-4, Disease resistance (Os08t0189300-01)
Coordinates
chr8:+:5228827..5229949
Molecular Weight (calculated)
24575.6 Da
IEP (calculated)
8.233
GRAVY (calculated)
0.016
Length
224 amino acids
Sequence
(BLAST)
001: MASSSSLYLL AALLALASWQ AIAFDPSPLQ DFCVADMKSP VRVNGFPCKN PMEVNSDDFF NAAKFDMPRS TMNKVGSNVT NLNVLNFPGL NTLGISLARI
101: DYAPLGVNPP HIHPRATELL TVLEGTLYVG FVTSNPNRLF SKVVHKGDTF VFPKAMIHFQ MNLDHNKPAV AQSSLNSQNP GVITIASAVF GSKPPISDDV
201: LTKAFQVEKK VIDWLKSQFW ESNY
Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)
001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY
Arabidopsis Description
Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.