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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 extracellular: 25047395
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os12t0154800-01 Rice extracellular 93.45 93.45
Os12t0154700-01 Rice extracellular 92.58 92.58
Os12t0155000-01 Rice cytosol, extracellular, vacuole 78.6 92.31
EES13464 Sorghum extracellular 81.22 82.3
Zm00001d000017_P001 Maize extracellular 79.91 80.97
Zm00001d000018_P001 Maize extracellular 79.48 80.53
Zm00001d000012_P001 Maize extracellular 79.04 79.74
Os08t0189700-01 Rice extracellular 73.8 75.45
GSMUA_Achr5P26690_001 Banana extracellular, vacuole 63.76 74.87
Os08t0189600-01 Rice extracellular 73.36 74.67
Os08t0189850-01 Rice extracellular 72.93 74.55
Os08t0189900-01 Rice extracellular 72.93 74.55
Os08t0190100-01 Rice extracellular 72.93 74.55
GSMUA_Achr5P26710_001 Banana cytosol 65.07 74.13
Os08t0189400-01 Rice extracellular 72.05 73.66
Os08t0189500-01 Rice extracellular 72.05 73.33
Os08t0189100-01 Rice extracellular 69.87 72.4
VIT_14s0128g01040.t01 Wine grape peroxisome 38.86 72.36
GSMUA_Achr5P26730_001 Banana extracellular, vacuole 68.12 71.89
GSMUA_Achr5P26750_001 Banana extracellular, vacuole 68.12 71.89
GSMUA_Achr5P26760_001 Banana extracellular, vacuole 68.12 71.89
Os08t0188900-01 Rice plastid 68.12 71.23
Os08t0231400-01 Rice extracellular 65.94 67.41
Os02t0491600-00 Rice extracellular 62.88 66.67
Os02t0491800-00 Rice extracellular 64.19 65.92
VIT_14s0006g02360.t01 Wine grape cytosol, plastid 58.52 65.37
GSMUA_Achr5P26700_001 Banana extracellular 51.09 65.36
Os08t0189300-01 Rice extracellular 63.76 65.18
Os02t0491700-00 Rice extracellular 63.32 65.02
Os08t0189200-01 Rice extracellular 63.76 64.89
VIT_14s0060g02700.t01 Wine grape cytosol 59.39 64.15
VIT_14s0128g01030.t01 Wine grape extracellular, vacuole 61.57 64.09
VIT_14s0006g02380.t01 Wine grape extracellular 60.7 63.76
VIT_14s0060g02750.t01 Wine grape extracellular, vacuole 61.14 63.64
VIT_14s0060g02760.t01 Wine grape extracellular, vacuole 61.14 63.64
VIT_14s0128g00980.t01 Wine grape extracellular, vacuole 61.14 63.64
VIT_14s0128g00990.t01 Wine grape extracellular, vacuole 61.14 63.64
VIT_14s0128g01020.t01 Wine grape extracellular, vacuole 61.14 63.64
VIT_14s0006g02330.t01 Wine grape extracellular, vacuole 61.14 63.35
VIT_14s0006g02430.t01 Wine grape extracellular 60.26 63.3
VIT_14s0060g02730.t01 Wine grape peroxisome 57.21 63.28
VIT_14s0006g02350.t01 Wine grape extracellular 60.7 62.9
VIT_14s0006g02370.t01 Wine grape extracellular 60.7 62.9
VIT_14s0006g02390.t01 Wine grape extracellular 60.7 62.9
VIT_14s0006g02420.t01 Wine grape extracellular, vacuole 60.7 62.9
VIT_14s0006g02440.t01 Wine grape extracellular, vacuole 60.7 62.9
VIT_14s0128g00920.t01 Wine grape extracellular, vacuole 60.7 62.9
KRG92599 Soybean extracellular 60.7 62.61
KRG94454 Soybean extracellular 60.26 62.44
KRG94455 Soybean extracellular 60.26 62.44
KRG94457 Soybean extracellular 60.26 62.44
KRH07003 Soybean extracellular 60.26 62.44
VIT_10s0003g05300.t01 Wine grape extracellular, vacuole 58.52 62.33
VIT_14s0128g01010.t01 Wine grape extracellular, vacuole 59.83 62.27
CDY66959 Canola extracellular 59.39 62.1
VIT_12s0059g00730.t01 Wine grape extracellular 58.52 62.04
KRH07002 Soybean extracellular 59.83 61.99
VIT_14s0060g02710.t01 Wine grape extracellular, vacuole 53.28 61.93
KRG94046 Soybean extracellular 48.91 61.88
PGSC0003DMT400046992 Potato extracellular 61.57 61.84
VIT_14s0128g00690.t01 Wine grape extracellular, plasma membrane, vacuole 60.7 61.78
VIT_14s0128g01000.t01 Wine grape extracellular, vacuole 60.7 61.78
KRG94060 Soybean extracellular 59.39 61.54
KRG94062 Soybean extracellular 59.39 61.54
KRG94063 Soybean extracellular 59.39 61.54
KRG94068 Soybean extracellular 59.39 61.54
Solyc01g102900.2.1 Tomato extracellular 60.7 60.96
PGSC0003DMT400046879 Potato cytosol, extracellular, plastid, vacuole 44.98 60.95
KRH07001 Soybean extracellular 58.52 60.91
VIT_14s0060g02690.t01 Wine grape extracellular 58.52 60.91
KRH34184 Soybean extracellular 61.57 60.78
PGSC0003DMT400053423 Potato extracellular 60.26 60.53
VIT_14s0128g00650.t01 Wine grape extracellular 58.08 60.45
PGSC0003DMT400046891 Potato extracellular 60.7 60.43
VIT_16s0039g02920.t01 Wine grape plastid 48.47 60.33
KRH07007 Soybean extracellular 58.08 60.18
PGSC0003DMT400040093 Potato extracellular 59.83 60.09
CDY36876 Canola extracellular 57.64 60.0
VIT_16s0013g00010.t01 Wine grape extracellular 58.95 60.0
VIT_16s0013g00060.t01 Wine grape extracellular 58.95 60.0
VIT_16s0039g02860.t01 Wine grape extracellular 58.52 59.56
Bra039727.1-P Field mustard extracellular 57.21 59.55
CDY36875 Canola extracellular, vacuole 57.21 59.55
CDY53728 Canola extracellular 57.21 59.55
KRH11811 Soybean extracellular 55.9 59.53
KRH42281 Soybean extracellular 55.9 59.53
VIT_12s0059g00720.t01 Wine grape plastid 41.05 59.49
Solyc10g078840.1.1 Tomato extracellular 56.33 59.45
KRH34183 Soybean extracellular 51.09 59.09
KRH58405 Soybean vacuole 55.46 59.07
VIT_10s0003g05250.t01 Wine grape extracellular 55.46 59.07
KRG92598 Soybean extracellular 59.83 59.05
PGSC0003DMT400029687 Potato extracellular 55.9 58.99
AT5G39150.1 Thale cress extracellular 56.77 58.82
AT5G39180.1 Thale cress extracellular 56.77 58.82
VIT_10s0003g05260.t01 Wine grape extracellular 55.46 58.8
AT5G38930.1 Thale cress extracellular 57.21 58.74
PGSC0003DMT400046887 Potato extracellular 58.95 58.7
CDY69461 Canola extracellular 48.91 58.64
KRG94458 Soybean extracellular 55.9 58.45
AT5G39120.1 Thale cress extracellular 56.33 58.37
AT4G14630.1 Thale cress extracellular 56.33 58.11
PGSC0003DMT400029689 Potato extracellular 55.02 58.06
KRG94453 Soybean extracellular 53.71 58.02
Bra027979.1-P Field mustard extracellular 49.78 57.87
CDX95190 Canola extracellular 49.78 57.87
AT5G39110.1 Thale cress endoplasmic reticulum, extracellular, vacuole 55.9 57.66
Solyc10g078850.1.1 Tomato extracellular 52.84 57.62
KRH36828 Soybean extracellular 54.59 57.6
AT5G38960.1 Thale cress extracellular 55.46 56.95
Bra020560.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 55.46 56.95
CDX99669 Canola vacuole 55.46 56.95
CDY05545 Canola endoplasmic reticulum, extracellular, vacuole 55.46 56.95
CDY15957 Canola vacuole 55.46 56.95
AT5G39160.1 Thale cress extracellular, vacuole 55.02 56.76
AT5G39190.1 Thale cress extracellular, vacuole 55.02 56.76
KRH07008 Soybean extracellular, plasma membrane, vacuole 53.28 56.74
Bra028467.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 54.15 56.62
CDY11695 Canola endoplasmic reticulum, extracellular, vacuole 54.15 56.62
VIT_16s0013g00090.t01 Wine grape extracellular, vacuole 56.33 56.58
Bra030358.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 55.02 56.5
AT5G39130.1 Thale cress extracellular 54.59 56.31
CDY37880 Canola extracellular 54.59 56.31
CDY69099 Canola endoplasmic reticulum, extracellular, vacuole 53.71 56.16
Bra028225.1-P Field mustard extracellular, vacuole 54.15 55.86
CDX74487 Canola extracellular, vacuole 54.15 55.86
VIT_14s0128g00970.t01 Wine grape vacuole 61.57 55.08
AT3G05950.1 Thale cress extracellular, plasma membrane, vacuole 54.15 54.15
Bra028424.1-P Field mustard extracellular, vacuole 51.97 54.09
CDX67421 Canola extracellular, vacuole 51.97 54.09
Bra025428.1-P Field mustard cytosol, extracellular, vacuole 58.95 53.78
AT3G04200.1 Thale cress extracellular, vacuole 52.84 53.3
KRG94695 Soybean nucleus 49.34 53.3
PGSC0003DMT400044231 Potato extracellular 51.53 52.68
Solyc09g089990.2.1 Tomato extracellular 51.53 52.68
AT5G38940.2 Thale cress plastid 56.77 52.63
KRG94061 Soybean extracellular, plasma membrane, vacuole 47.16 52.43
Bra040243.1-P Field mustard extracellular, plasma membrane, vacuole 51.53 51.53
CDY18834 Canola extracellular, plasma membrane, vacuole 51.53 51.53
AT3G04180.1 Thale cress extracellular, vacuole 48.47 50.0
AT3G04190.1 Thale cress extracellular, vacuole 48.47 50.0
CDX99677 Canola extracellular, vacuole 59.39 49.45
AT3G04170.1 Thale cress extracellular, vacuole 47.6 48.02
Solyc09g090040.2.1 Tomato extracellular 45.85 46.05
PGSC0003DMT400044224 Potato extracellular 44.98 45.78
Bra001097.1-P Field mustard extracellular, plasma membrane, vacuole 45.85 45.06
AT3G04150.2 Thale cress extracellular, vacuole 46.29 43.8
CDX74197 Canola cytosol, extracellular, plastid, vacuole 36.24 42.78
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 70.31 37.79
PGSC0003DMT400087849 Potato extracellular 57.21 30.54
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:4351538ProteinID:ABA96482.1ProteinID:BAF29209.2ProteinID:BAT15943.1
InterPro:Cupin_1ProteinID:EEE52790.1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0005618GO:GO:0005623GO:GO:0030145GO:GO:0030312GO:GO:0045735GO:GO:0046872
GO:GO:0048046InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710EnsemblPlantsGene:Os12g0154900EnsemblPlants:Os12t0154900-00
PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF94UniProt:Q2QXJ1
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0000681A0B
RefSeq:XP_015619657.1:::::
Description
GERMIN-LIKE PROTEIN 12-3Germin-like protein 12-3, Disease resistance (Os12t0154900-00)
Coordinates
chr12:-:2696407..2697214
Molecular Weight (calculated)
24678.5 Da
IEP (calculated)
6.101
GRAVY (calculated)
-0.021
Length
229 amino acids
Sequence
(BLAST)
001: MASSNFFLLI PLIALVTTQA MASDPSPLQD LCVADKNSPV RVNGFPCKDA KDVSVDDFFL AANLDKPMDI TKSKAGSNVT LINVMKLAGL NTLGISMARI
101: DYAPKGQNPP HTHPRATEIL SVIEGSLYVG FVTSNQANGE NKLFTKTLNK GDVFVFPEGL IHFQFNPSYD KPAAAIVALS SQNPGAITIA NAVFGSNPPI
201: SDDVLAKAFQ VDKKAVDWLQ AQFWENNHN
Best Arabidopsis Sequence Match ( AT4G14630.1 )
(BLAST)
001: MTIKSLSFLA ALSLFALTLP LVIASDPSPL QDFCVGVNTP ADGVFVNGKF CKDPRIVFAD DFFFSSLNRP GNTNNAVGSN VTTVNVNNLG GLNTLGISLV
101: RIDYAPNGQN PPHTHPRATE ILVVQQGTLL VGFISSNQDG NRLFAKTLNV GDVFVFPEGL IHFQFNLGGT PAVAIAALSS QNAGVITIAN TIFGSKPDVD
201: PNVLARAFQM DVNAVRNLQA RF
Arabidopsis Description
GLP9At4g14630 [Source:UniProtKB/TrEMBL;Acc:Q56XY5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.